DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rep_fac-A_C | PF08646 | 3 - 69 | 6.9e-07 | Replication factor-A C terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 31 |
| AcsI | RAATTY | 1 cut(s) | 135 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AgsI | TTSAA | 1 cut(s) | 128 |
| AluBI | AGCT | 2 cut(s) | 193, 276 |
| AluI | AGCT | 2 cut(s) | 193, 276 |
| ApeKI | GCWGC | 1 cut(s) | 190 |
| ApoI | RAATTY | 1 cut(s) | 135 |
| AspLEI | GCGC | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 1 cut(s) | 241 |
| BbvI | GCAGC | 1 cut(s) | 202 |
| BccI | CCATC | 1 cut(s) | 6 |
| BciVI | GTATCC | 1 cut(s) | 58 |
| BfmI | CTRYAG | 1 cut(s) | 159 |
| BfuI | GTATCC | 1 cut(s) | 58 |
| BisI | GCNGC | 1 cut(s) | 191 |
| BlsI | GCNGC | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 1 cut(s) | 113 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 168, 198 |
| BseDI | CCNNGG | 1 cut(s) | 113 |
| BseGI | GGATG | 2 cut(s) | 17, 96 |
| BseXI | GCAGC | 1 cut(s) | 202 |
| Bsp19I | CCATGG | 1 cut(s) | 113 |
| BssECI | CCNNGG | 1 cut(s) | 113 |
| BssT1I | CCWWGG | 1 cut(s) | 113 |
| Bst4CI | ACNGT | 1 cut(s) | 163 |
| BstDSI | CCRYGG | 1 cut(s) | 113 |
| BstF5I | GGATG | 2 cut(s) | 17, 96 |
| BstHHI | GCGC | 1 cut(s) | 32 |
| BstSFI | CTRYAG | 1 cut(s) | 159 |
| BstV1I | GCAGC | 1 cut(s) | 202 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 114 |
| BsuI | GTATCC | 1 cut(s) | 58 |
| BtgI | CCRYGG | 1 cut(s) | 113 |
| BtsCI | GGATG | 2 cut(s) | 17, 96 |
| BtsIMutI | CAGTG | 1 cut(s) | 69 |
| CfoI | GCGC | 1 cut(s) | 32 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviAII | CATG | 3 cut(s) | 92, 114, 172 |
| CviJI | RGCY | 3 cut(s) | 158, 193, 276 |
| CviKI_1 | RGCY | 3 cut(s) | 158, 193, 276 |
| CviQI | GTAC | 1 cut(s) | 19 |
| Eco130I | CCWWGG | 1 cut(s) | 113 |
| EcoT14I | CCWWGG | 1 cut(s) | 113 |
| ErhI | CCWWGG | 1 cut(s) | 113 |
| FaeI | CATG | 3 cut(s) | 95, 117, 175 |
| FaiI | YATR | 6 cut(s) | 42, 93, 115, 120, 173, 246 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 197, 229, 248, 280 |
| FatI | CATG | 3 cut(s) | 91, 113, 171 |
| Fnu4HI | GCNGC | 1 cut(s) | 191 |
| FokI | GGATG | 2 cut(s) | 24, 83 |
| Fsp4HI | GCNGC | 1 cut(s) | 191 |
| FspI | TGCGCA | 1 cut(s) | 31 |
| GlaI | GCGC | 1 cut(s) | 31 |
| GluI | GCNGC | 1 cut(s) | 191 |
| HhaI | GCGC | 1 cut(s) | 32 |
| Hin1II | CATG | 3 cut(s) | 95, 117, 175 |
| Hin6I | GCGC | 1 cut(s) | 30 |
| HinP1I | GCGC | 1 cut(s) | 30 |
| HindIII | AAGCTT | 1 cut(s) | 274 |
| HinfI | GANTC | 3 cut(s) | 103, 201, 259 |
| HphI | GGTGA | 1 cut(s) | 241 |
| Hpy188III | TCNNGA | 4 cut(s) | 86, 100, 140, 205 |
| HpyCH4III | ACNGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| Hsp92II | CATG | 3 cut(s) | 95, 117, 175 |
| HspAI | GCGC | 1 cut(s) | 30 |
| LpnPI | CCDG | 5 cut(s) | 49, 94, 99, 113, 140 |
| Lsp1109I | GCAGC | 1 cut(s) | 202 |
| MaeIII | GTNAC | 1 cut(s) | 140 |
| MluCI | AATT | 2 cut(s) | 74, 135 |
| MnlI | CCTC | 2 cut(s) | 55, 262 |
| MseI | TTAA | 2 cut(s) | 272, 310 |
| MslI | CAYNNNNRTG | 1 cut(s) | 112 |
| NcoI | CCATGG | 1 cut(s) | 113 |
| NlaIII | CATG | 3 cut(s) | 95, 117, 175 |
| NmuCI | GTSAC | 1 cut(s) | 140 |
| NsbI | TGCGCA | 1 cut(s) | 31 |
| PfeI | GAWTC | 3 cut(s) | 103, 201, 259 |
| PkrI | GCNGC | 1 cut(s) | 192 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 112 |
| SaqAI | TTAA | 2 cut(s) | 272, 310 |
| SatI | GCNGC | 1 cut(s) | 191 |
| SetI | ASST | 6 cut(s) | 38, 83, 195, 245, 254, 278 |
| SfcI | CTRYAG | 1 cut(s) | 159 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 112 |
| Sse9I | AATT | 2 cut(s) | 74, 135 |
| StyI | CCWWGG | 1 cut(s) | 113 |
| TaaI | ACNGT | 1 cut(s) | 163 |
| TasI | AATT | 2 cut(s) | 74, 135 |
| TfiI | GAWTC | 3 cut(s) | 103, 201, 259 |
| Tru1I | TTAA | 2 cut(s) | 272, 310 |
| Tru9I | TTAA | 2 cut(s) | 272, 310 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseFI | GTSAC | 1 cut(s) | 140 |
| TseI | GCWGC | 1 cut(s) | 190 |
| Tsp45I | GTSAC | 1 cut(s) | 140 |
| TspDTI | ATGAA | 1 cut(s) | 146 |
| TspRI | CASTG | 1 cut(s) | 76 |
| XapI | RAATTY | 1 cut(s) | 135 |