Belongs to the helicase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 5 - 106 | 6.2e-13 | Domain of unknown function DUF223 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 390 |
| Acc36I | ACCTGC | 1 cut(s) | 390 |
| AclWI | GGATC | 1 cut(s) | 144 |
| AcoI | YGGCCR | 1 cut(s) | 817 |
| AcuI | CTGAAG | 4 cut(s) | 147, 228, 608, 640 |
| AcyI | GRCGYC | 1 cut(s) | 490 |
| AfaI | GTAC | 4 cut(s) | 129, 374, 500, 554 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 546 |
| AgeI | ACCGGT | 1 cut(s) | 354 |
| AjiI | CACGTC | 1 cut(s) | 35 |
| AluBI | AGCT | 6 cut(s) | 518, 563, 609, 875, 956, 991 |
| AluI | AGCT | 6 cut(s) | 518, 563, 609, 875, 956, 991 |
| Alw21I | GWGCWC | 1 cut(s) | 993 |
| Alw26I | GTCTC | 1 cut(s) | 171 |
| AlwI | GGATC | 1 cut(s) | 144 |
| AoxI | GGCC | 3 cut(s) | 115, 476, 817 |
| ApeKI | GCWGC | 1 cut(s) | 281 |
| AseI | ATTAAT | 1 cut(s) | 707 |
| AsiGI | ACCGGT | 1 cut(s) | 354 |
| AspLEI | GCGC | 1 cut(s) | 286 |
| AsuHPI | GGTGA | 2 cut(s) | 529, 891 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 376, 409 |
| BalI | TGGCCA | 1 cut(s) | 819 |
| BanII | GRGCYC | 1 cut(s) | 993 |
| Bbv12I | GWGCWC | 1 cut(s) | 993 |
| BbvCI | CCTCAGC | 1 cut(s) | 697 |
| BbvI | GCAGC | 1 cut(s) | 293 |
| BccI | CCATC | 2 cut(s) | 904, 904 |
| BceAI | ACGGC | 1 cut(s) | 646 |
| BclI | TGATCA | 1 cut(s) | 534 |
| BcoDI | GTCTC | 1 cut(s) | 171 |
| BfuAI | ACCTGC | 1 cut(s) | 390 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| BmgBI | CACGTC | 1 cut(s) | 35 |
| BmsI | GCATC | 3 cut(s) | 139, 441, 679 |
| BpmI | CTGGAG | 1 cut(s) | 777 |
| Bpu10I | CCTNAGC | 1 cut(s) | 697 |
| BpuEI | CTTGAG | 1 cut(s) | 90 |
| Bsa29I | ATCGAT | 1 cut(s) | 396 |
| BsaHI | GRCGYC | 1 cut(s) | 490 |
| BsaWI | WCCGGW | 1 cut(s) | 354 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 546 |
| Bse118I | RCCGGY | 1 cut(s) | 354 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| BseCI | ATCGAT | 1 cut(s) | 396 |
| BseGI | GGATG | 1 cut(s) | 888 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 546 |
| BseMII | CTCAG | 2 cut(s) | 711, 995 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BseXI | GCAGC | 1 cut(s) | 293 |
| BsgI | GTGCAG | 3 cut(s) | 88, 368, 627 |
| Bsh1285I | CGRYCG | 1 cut(s) | 853 |
| BshFI | GGCC | 3 cut(s) | 117, 478, 819 |
| BshTI | ACCGGT | 1 cut(s) | 354 |
| BshVI | ATCGAT | 1 cut(s) | 396 |
| BsiEI | CGRYCG | 1 cut(s) | 853 |
| BsiHKAI | GWGCWC | 1 cut(s) | 993 |
| BsiSI | CCGG | 1 cut(s) | 355 |
| BslFI | GGGAC | 1 cut(s) | 441 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 546 |
| BsmAI | GTCTC | 1 cut(s) | 171 |
| BsmFI | GGGAC | 1 cut(s) | 441 |
| BsnI | GGCC | 3 cut(s) | 117, 478, 819 |
| Bsp1286I | GDGCHC | 1 cut(s) | 993 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 3 cut(s) | 136, 534, 759 |
| BspANI | GGCC | 3 cut(s) | 117, 478, 819 |
| BspCNI | CTCAG | 2 cut(s) | 710, 994 |
| BspDI | ATCGAT | 1 cut(s) | 396 |
| BspMI | ACCTGC | 1 cut(s) | 390 |
| BspPI | GGATC | 1 cut(s) | 144 |
| BspQI | GCTCTTC | 1 cut(s) | 998 |
| BsrFI | RCCGGY | 1 cut(s) | 354 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssAI | RCCGGY | 1 cut(s) | 354 |
| BssMI | GATC | 3 cut(s) | 136, 534, 759 |
| BssNI | GRCGYC | 1 cut(s) | 490 |
| Bst4CI | ACNGT | 4 cut(s) | 75, 125, 234, 392 |
| Bst6I | CTCTTC | 1 cut(s) | 998 |
| BstACI | GRCGYC | 1 cut(s) | 490 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 2 cut(s) | 565, 611 |
| BstDEI | CTNAG | 2 cut(s) | 697, 981 |
| BstF5I | GGATG | 1 cut(s) | 888 |
| BstHHI | GCGC | 1 cut(s) | 286 |
| BstKTI | GATC | 3 cut(s) | 139, 537, 762 |
| BstMAI | GTCTC | 1 cut(s) | 171 |
| BstMBI | GATC | 3 cut(s) | 136, 534, 759 |
| BstMCI | CGRYCG | 1 cut(s) | 853 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 158, 573 |
| BstV1I | GCAGC | 1 cut(s) | 293 |
| Bsu15I | ATCGAT | 1 cut(s) | 396 |
| BsuRI | GGCC | 3 cut(s) | 117, 478, 819 |
| BsuTUI | ATCGAT | 1 cut(s) | 396 |
| BtrI | CACGTC | 1 cut(s) | 35 |
| BtsCI | GGATG | 1 cut(s) | 888 |
| BtsIMutI | CAGTG | 3 cut(s) | 121, 171, 204 |
| BveI | ACCTGC | 1 cut(s) | 390 |
| Cac8I | GCNNGC | 2 cut(s) | 565, 611 |
| CfoI | GCGC | 1 cut(s) | 286 |
| Cfr10I | RCCGGY | 1 cut(s) | 354 |
| ClaI | ATCGAT | 1 cut(s) | 396 |
| CseI | GACGC | 2 cut(s) | 438, 498 |
| Csp6I | GTAC | 4 cut(s) | 128, 373, 499, 553 |
| CspAI | ACCGGT | 1 cut(s) | 354 |
| CviAII | CATG | 3 cut(s) | 158, 494, 571 |
| CviQI | GTAC | 4 cut(s) | 128, 373, 499, 553 |
| DdeI | CTNAG | 2 cut(s) | 697, 981 |
| DpnI | GATC | 3 cut(s) | 138, 536, 761 |
| DpnII | GATC | 3 cut(s) | 136, 534, 759 |
| EaeI | YGGCCR | 1 cut(s) | 817 |
| Eam1104I | CTCTTC | 1 cut(s) | 998 |
| EarI | CTCTTC | 1 cut(s) | 998 |
| Ecl136II | GAGCTC | 1 cut(s) | 991 |
| Eco147I | AGGCCT | 1 cut(s) | 478 |
| Eco24I | GRGCYC | 1 cut(s) | 993 |
| Eco53kI | GAGCTC | 1 cut(s) | 991 |
| Eco57I | CTGAAG | 4 cut(s) | 147, 228, 608, 640 |
| EcoICRI | GAGCTC | 1 cut(s) | 991 |
| EcoT38I | GRGCYC | 1 cut(s) | 993 |
| FaeI | CATG | 3 cut(s) | 161, 497, 574 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 617, 649 |
| FaqI | GGGAC | 1 cut(s) | 441 |
| FatI | CATG | 3 cut(s) | 157, 493, 570 |
| FbaI | TGATCA | 1 cut(s) | 534 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| FokI | GGATG | 1 cut(s) | 875 |
| FriOI | GRGCYC | 1 cut(s) | 993 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| GlaI | GCGC | 1 cut(s) | 285 |
| GluI | GCNGC | 1 cut(s) | 282 |
| GsuI | CTGGAG | 1 cut(s) | 777 |
| HaeIII | GGCC | 3 cut(s) | 117, 478, 819 |
| HapII | CCGG | 1 cut(s) | 355 |
| HgaI | GACGC | 2 cut(s) | 438, 498 |
| HhaI | GCGC | 1 cut(s) | 286 |
| Hin1I | GRCGYC | 1 cut(s) | 490 |
| Hin1II | CATG | 3 cut(s) | 161, 497, 574 |
| Hin6I | GCGC | 1 cut(s) | 284 |
| HinP1I | GCGC | 1 cut(s) | 284 |
| HincII | GTYRAC | 1 cut(s) | 978 |
| HindII | GTYRAC | 1 cut(s) | 978 |
| HindIII | AAGCTT | 1 cut(s) | 561 |
| HinfI | GANTC | 7 cut(s) | 13, 257, 482, 689, 738, 974, 1004 |
| HpaII | CCGG | 1 cut(s) | 355 |
| HphI | GGTGA | 2 cut(s) | 529, 891 |
| Hpy166II | GTNNAC | 3 cut(s) | 128, 499, 978 |
| Hpy188I | TCNGA | 2 cut(s) | 659, 984 |
| Hpy188III | TCNNGA | 7 cut(s) | 107, 486, 637, 674, 794, 808, 884 |
| Hpy8I | GTNNAC | 3 cut(s) | 128, 499, 978 |
| Hpy99I | CGWCG | 1 cut(s) | 407 |
| HpyAV | CCTTC | 7 cut(s) | 163, 167, 203, 468, 664, 761, 954 |
| HpyCH4III | ACNGT | 4 cut(s) | 75, 125, 234, 392 |
| HpyCH4IV | ACGT | 1 cut(s) | 34 |
| HpyCH4V | TGCA | 5 cut(s) | 69, 385, 644, 670, 961 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 158, 573 |
| HpyF3I | CTNAG | 2 cut(s) | 697, 981 |
| HpySE526I | ACGT | 1 cut(s) | 34 |
| Hsp92I | GRCGYC | 1 cut(s) | 490 |
| Hsp92II | CATG | 3 cut(s) | 161, 497, 574 |
| HspAI | GCGC | 1 cut(s) | 284 |
| Ksp22I | TGATCA | 1 cut(s) | 534 |
| Kzo9I | GATC | 3 cut(s) | 136, 534, 759 |
| LguI | GCTCTTC | 1 cut(s) | 998 |
| Lsp1109I | GCAGC | 1 cut(s) | 293 |
| LweI | GCATC | 3 cut(s) | 139, 441, 679 |
| MaeII | ACGT | 1 cut(s) | 34 |
| MaeIII | GTNAC | 5 cut(s) | 460, 739, 770, 913, 922 |
| MalI | GATC | 3 cut(s) | 138, 536, 761 |
| MboI | GATC | 3 cut(s) | 136, 534, 759 |
| MboII | GAAGA | 6 cut(s) | 197, 304, 689, 776, 796, 985 |
| MfeI | CAATTG | 2 cut(s) | 321, 450 |
| MhlI | GDGCHC | 1 cut(s) | 993 |
| MlsI | TGGCCA | 1 cut(s) | 819 |
| MluCI | AATT | 8 cut(s) | 225, 267, 321, 333, 450, 522, 821, 998 |
| MluNI | TGGCCA | 1 cut(s) | 819 |
| MlyI | GAGTC | 2 cut(s) | 747, 983 |
| MmeI | TCCRAC | 1 cut(s) | 916 |
| MnlI | CCTC | 7 cut(s) | 74, 348, 422, 448, 658, 706, 801 |
| Mox20I | TGGCCA | 1 cut(s) | 819 |
| MscI | TGGCCA | 1 cut(s) | 819 |
| MseI | TTAA | 2 cut(s) | 707, 845 |
| Msp20I | TGGCCA | 1 cut(s) | 819 |
| MspI | CCGG | 1 cut(s) | 355 |
| MunI | CAATTG | 2 cut(s) | 321, 450 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 158, 573 |
| NdeII | GATC | 3 cut(s) | 136, 534, 759 |
| NlaIII | CATG | 3 cut(s) | 161, 497, 574 |
| NmuCI | GTSAC | 3 cut(s) | 460, 739, 922 |
| PaqCI | CACCTGC | 1 cut(s) | 390 |
| PceI | AGGCCT | 1 cut(s) | 478 |
| PciSI | GCTCTTC | 1 cut(s) | 998 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 402 |
| PfeI | GAWTC | 5 cut(s) | 13, 257, 482, 689, 1004 |
| PinAI | ACCGGT | 1 cut(s) | 354 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| PleI | GAGTC | 2 cut(s) | 746, 982 |
| PpsI | GAGTC | 2 cut(s) | 746, 982 |
| PshBI | ATTAAT | 1 cut(s) | 707 |
| Psp124BI | GAGCTC | 1 cut(s) | 993 |
| RsaI | GTAC | 4 cut(s) | 129, 374, 500, 554 |
| RsaNI | GTAC | 4 cut(s) | 128, 373, 499, 553 |
| SacI | GAGCTC | 1 cut(s) | 993 |
| SapI | GCTCTTC | 1 cut(s) | 998 |
| SaqAI | TTAA | 2 cut(s) | 707, 845 |
| SatI | GCNGC | 1 cut(s) | 282 |
| Sau3AI | GATC | 3 cut(s) | 136, 534, 759 |
| SchI | GAGTC | 2 cut(s) | 747, 983 |
| SduI | GDGCHC | 1 cut(s) | 993 |
| SfaNI | GCATC | 3 cut(s) | 139, 441, 679 |
| SmlI | CTYRAG | 1 cut(s) | 105 |
| SmoI | CTYRAG | 1 cut(s) | 105 |
| Sse9I | AATT | 8 cut(s) | 225, 267, 321, 333, 450, 522, 821, 998 |
| SseBI | AGGCCT | 1 cut(s) | 478 |
| SspI | AATATT | 1 cut(s) | 90 |
| SstI | GAGCTC | 1 cut(s) | 993 |
| StuI | AGGCCT | 1 cut(s) | 478 |
| TaaI | ACNGT | 4 cut(s) | 75, 125, 234, 392 |
| TaiI | ACGT | 1 cut(s) | 37 |
| TaqI | TCGA | 4 cut(s) | 5, 396, 675, 762 |
| TaqII | GACCGA | 1 cut(s) | 867 |
| TasI | AATT | 8 cut(s) | 225, 267, 321, 333, 450, 522, 821, 998 |
| TatI | WGTACW | 3 cut(s) | 127, 372, 498 |
| TfiI | GAWTC | 5 cut(s) | 13, 257, 482, 689, 1004 |
| Tru1I | TTAA | 2 cut(s) | 707, 845 |
| Tru9I | TTAA | 2 cut(s) | 707, 845 |
| TscAI | CASTG | 3 cut(s) | 128, 171, 211 |
| TseFI | GTSAC | 3 cut(s) | 460, 739, 922 |
| TseI | GCWGC | 1 cut(s) | 281 |
| Tsp45I | GTSAC | 3 cut(s) | 460, 739, 922 |
| TspDTI | ATGAA | 3 cut(s) | 146, 198, 237 |
| TspGWI | ACGGA | 1 cut(s) | 486 |
| TspRI | CASTG | 3 cut(s) | 128, 171, 211 |
| VspI | ATTAAT | 1 cut(s) | 707 |