Rorug05G0528800

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
71791332 .. 71799348
8017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0528800.1

Sequence Viewer

Length: 3000 bp
ATGGGTCGCCCCACTTTCTCCTCCGATGAAGTTGTGATCAAGTCTCCGAATGATAAACGACTCTACAGATTGATTAAGCTTGAGAATGGCGTCACTGCATTACTCATTCATGATCCTGATATATACCCACAAGGGTTTAAGAGCCTTGAGCCCTGTGAAGATGAAGAAGCAGCCAAAGGTGGAGATTGTGAGGTTGGAAATAAGGGAAAGGGAGGTGCTTTACAGGCTAAGAAGGCAGCAGCAGCAATGTGCGTTGGAATAGGCAGCTGGTCTGACCCTATGGAGGCACAGGGGCTTGCACACTTTCTAGAACACATGCTGTTCATGGGGAGTACAAAATTCCCAGTTGAAAATGAGTATGATAGTTACTTGTCCAAGCATGGAGGGTCATCAAATGCATACACCTGTGCAGAGCATACTTGCTACTTTTTTGAAGTGAAACCGGAGTTTCTTAAGGGTGCCTTGACAAGATTTTCTCAGTTCTTTGTTTCACCTCTGATAAAAAGTGAATCCATGGAGCGAGAGATACAGGCTATAGATTCAGAGTTTAACAGGGTTCTGCAAAATGACTTTTGCCGCCTTCGACAACTTCAATGCTATACATCCACACCAGGTCACCCGTTTAATAGATTTTCTCGAGGAAATAAGAAGAGCTTGGATGATGCAACGAAAAAGGGGATCAACTTGCAGGAACAAATACTGAAATTGTACAGAAACTATTACCGCGGTGGATTAATGAAGCTAGTTGTCATTGGTGGAGAGTCGCTCGATGTACTAGAGAAGTGGATTTTGGAATTGTATAGAGATGTCAAAACCGGTCCCCAAGTAAATCTGGAGTTCAAGGCAGACGGTCCTATTTGGAAAGCTGGAAAAGTTTACAGGCTAGAGGCTGTTCAAGATGTTCATATACTGCAATTGTCATGGAAACTTCCATGCCTTCTTCAAGACTATTTGAAAGGCCCAGAATTTTATTTACATCATCTCCTTGTGCATGAGGGCAGGGGAAGTTTGCATTTCTACCTCAAAGCTAGAGGGTGGGCAACGTATCTAGGTGCTTCGGTGAGCCGCTATCCTGTGGCCGATGTCTTTTGCATGATCATATACCTCACTGACTCTGGACTGGAAAAGATTTTTGAAATAATTGGGTTGGTGTATCAATACATTAAGTTACTACGTCAGGAGACGCCAGAATGGATATTTCGGGAACTCCAGGATATAGCGAACATGTGCTTTAGATTTGCAGAGGAGGAGCCTTTCCAGGATGATTATGTTTCAAACCTTGCAGAAAATTTACGACGTTATGCAGCACAGCATGTTATTTATGGGGACTATGTGTTTGGGATATGGGATGAGGTATTGATACAAAATGTTCTGGGTTTCTTCTCTCCAGAAAACATGAGGATTGATGTGGTATCAAAGTTCTCATTTAAGTCAGAAGAGTTTCAGTGCGAGCCTTGGTTCGGGTCACATTATACCGAGGAAGATATATCTCCAGCTTTGATGGAATTGTGGAAGGATCCTCCAGAAATTGATGTATCGTTGCATCTGCGGGCAAAAAATGAGTTCATTCCTAGTGACTTTTCCATCCGTTCTGATGGGATGTGTCTTGATATTTCAAATATATCTTCTCCGGCATGTATGTTTGATGAACCATTGATGAAGATCTGGTACAAGCTTGATAGTACTTTTAAACTTCCACGGGCAAATGCGTACTTCTTCATCAGAATGAAAGGTGGATATGATAATGTAAAAAGTAGTGTTTTGACAGACTTATACATCGACCTTCTTCAAGATGAGCTCAGTGAGATCATCTATCAGGCTTATGTTGCCTGCTTGGGGACTTCTATTTCTGTGTTTACCGACAAACTCCAGCTGCAGGTGTATGGTTTCAATGATAAGCTTCCAGTTCTGTTGTCAAAAATTGTGGAAACAGTAAAGAGCTTCTTGCCAACTGATGATCGTTTTGAGGTTATTAAAGAAGACATGGTGCGAGTGTATAGGAATGCCAATATGAATCCTTGGGGTCACTCAACATACTTGAGAGAGCAAGTTTTGTTGCAGAGTTTCTACAACGTAGATGAGCTGTTTCATGTTTTGAATGGGTTGTCCGTTTCTGATTTGAAGTCATTTATTCCTGAGCTTTTCTCCCAGATCTACATTGAGGGCCTTTTCCATGGTAATTTGTCAGAAGAAGAAGCAATTAGCCTCTCAAATTTATTCAAGACAATCTTTTCCGTAAAACCACTTCCTGTTGAATTGATGTATAGAAATCATTGTATTTGTCTTCCTTCTAATGCTAACCTCATTAGAGATGCTACTGTGAAGAACAAGTCAGAAACAAATTCTGTGACAGAGCTGTATTTTCAAATTGAGTGGGCAGTAGGGAGCGAGTCCATGAGATGGAAAGTTTTGATAGATCTTTTCGATGCAATTGTGAAGGAACCACTTTTTAATCAGCTAAGGACAAAGGAGCAGCTCGGGTATGGAGTTCAGTGTGGTCGGGATTTAAAATGGGGTGTTTTTGGCATTCTTTTCTCTGTTCAGTCATCTGAGTACAACCCAGTCCACCTACAAGGAAGACTAGACAACTTCATAAATGGTCTGGAAGATTTGTTGGAAGGACTGGATGATGATTCCTTTGAGAATTATAAAGCTGGACTAATGGAAAATCTTTTGAAGAAAGATACATCCCTCACGTGTGAAACCAATCGATTGTGGAATGAGATTTATATTAAAAGGTATATGTTTGACTACTCAAAAAAGGCAGCAGAAGAACTCAGAAGCATTCAGAAGGGGGATGTTATCAACTTTTACAAGACATATTTGCAACAATCATCTCCCAAGTGTCGAAGACTTGCAACTTGTGTTTGGGGTTGCAACACCGACTTCAAAGAGGCAGAAGTAGCACGACTGGAGTCTGTGCAAGTCATTGAAGACGTTGCAGCCTTTAAGATGTCATCGAAGTTCTATAAACCTAAGATAAATACTCTGGATACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

999

Amino Acids

114.96

Weight (kDa)

5.35

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 75 - 189 1e-30 Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 231 - 404 2.8e-16 Peptidase M16 inactive domain
Peptidase_M16_M PF16187 411 - 696 1.8e-81 Middle or third domain of peptidase_M16
Peptidase_M16_C PF05193 702 - 887 9.9e-18 Peptidase M16 inactive domain
PqqF-like_C_4 PF22456 808 - 906 1.5e-22 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2649
AarI CACCTGC 1 cut(s) 1867
Acc36I ACCTGC 1 cut(s) 1867
AccB1I GGYRCC 1 cut(s) 458
AccB7I CCANNNNNTGG 1 cut(s) 2400
AccII CGCG 1 cut(s) 726
AciI CCGC 5 cut(s) 577, 724, 726, 1066, 1549
AclWI GGATC 4 cut(s) 107, 686, 1511, 1524
AcoI YGGCCR 1 cut(s) 1077
AcsI RAATTY 5 cut(s) 338, 965, 1288, 2212, 2341
AcvI CACGTG 1 cut(s) 2697
AcyI GRCGYC 2 cut(s) 90, 1184
AfaI GTAC 7 cut(s) 334, 710, 774, 1670, 1684, 1712, 2555
AfiI CCNNNNNNNGG 5 cut(s) 283, 1460, 1836, 1876, 2400
AflII CTTAAG 1 cut(s) 452
AflIII ACRYGT 2 cut(s) 1224, 2696
AgeI ACCGGT 1 cut(s) 815
AjnI CCWGG 3 cut(s) 610, 1209, 1257
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
Alw21I GWGCWC 1 cut(s) 1800
Alw26I GTCTC 2 cut(s) 48, 1175
AlwI GGATC 4 cut(s) 107, 686, 1511, 1524
Ama87I CYCGRG 2 cut(s) 636, 2477
AoxI GGCC 3 cut(s) 958, 1077, 2164
ApoI RAATTY 5 cut(s) 338, 965, 1288, 2212, 2341
ArsI GACNNNNNNTTYG 2 cut(s) 1319, 1351
AseI ATTAAT 1 cut(s) 734
AsiGI ACCGGT 1 cut(s) 815
Asp700I GAANNNNTTC 1 cut(s) 1440
AspS9I GGNCC 4 cut(s) 818, 851, 959, 2164
AsuHPI GGTGA 3 cut(s) 483, 608, 1072
AvaI CYCGRG 2 cut(s) 636, 2477
AvaII GGWCC 2 cut(s) 818, 851
BamHI GGATCC 1 cut(s) 1516
BanI GGYRCC 1 cut(s) 458
BanII GRGCYC 2 cut(s) 153, 1800
BarI GAAGNNNNNNTAC 4 cut(s) 1652, 1684, 2229, 2261
BbrPI CACGTG 1 cut(s) 2697
BbsI GAAGAC 5 cut(s) 1986, 2276, 2584, 2857, 2940
Bbv12I GWGCWC 1 cut(s) 1800
BccI CCATC 4 cut(s) 1495, 1589, 1592, 2394
BciT130I CCWGG 3 cut(s) 612, 1211, 1259
BciVI GTATCC 1 cut(s) 2986
BclI TGATCA 2 cut(s) 36, 1095
BcoDI GTCTC 2 cut(s) 48, 1175
BfaI CTAG 8 cut(s) 308, 743, 776, 884, 1029, 1049, 1572, 2582
BfmI CTRYAG 3 cut(s) 64, 534, 1874
BfrI CTTAAG 1 cut(s) 452
BfuAI ACCTGC 1 cut(s) 1867
BfuI GTATCC 1 cut(s) 2986
BglII AGATCT 3 cut(s) 1662, 2151, 2416
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 3 cut(s) 612, 1211, 1259
Bme18I GGWCC 2 cut(s) 818, 851
BmeT110I CYCGRG 2 cut(s) 636, 2477
BmgT120I GGNCC 4 cut(s) 818, 851, 959, 2164
BmiI GGNNCC 5 cut(s) 460, 820, 1251, 1518, 2442
BmrFI CCNGG 3 cut(s) 612, 1211, 1259
BmrI ACTGGG 2 cut(s) 338, 2555
BmsI GCATC 4 cut(s) 652, 1552, 2302, 2416
BmuI ACTGGG 2 cut(s) 338, 2555
BoxI GACNNNNGTC 1 cut(s) 2914
BpiI GAAGAC 5 cut(s) 1986, 2276, 2584, 2857, 2940
BplI GAGNNNNNCTC 4 cut(s) 750, 782, 2129, 2161
BpmI CTGGAG 7 cut(s) 854, 1193, 1371, 1476, 1506, 1853, 2933
Bpu10I CCTNAGC 2 cut(s) 2136, 2459
BpuEI CTTGAG 3 cut(s) 101, 167, 2059
Bsa29I ATCGAT 1 cut(s) 2710
BsaAI YACGTR 1 cut(s) 2697
BsaBI GATNNNNATC 1 cut(s) 1661
BsaHI GRCGYC 2 cut(s) 90, 1184
BsaJI CCNNGG 7 cut(s) 513, 724, 1454, 1476, 1697, 2018, 2173
BsaWI WCCGGW 2 cut(s) 442, 815
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 5 cut(s) 283, 1460, 1836, 1876, 2400
Bse118I RCCGGY 1 cut(s) 815
Bse1I ACTGG 6 cut(s) 344, 1125, 1904, 2561, 2628, 2916
Bse3DI GCAATG 1 cut(s) 252
Bse8I GATNNNNATC 1 cut(s) 1661
BseBI CCWGG 3 cut(s) 612, 1211, 1259
BseCI ATCGAT 1 cut(s) 2710
BseDI CCNNGG 7 cut(s) 513, 724, 1454, 1476, 1697, 2018, 2173
BseGI GGATG 9 cut(s) 602, 664, 1267, 1354, 1584, 1605, 2632, 2687, 2803
BseJI GATNNNNATC 1 cut(s) 1661
BseLI CCNNNNNNNGG 5 cut(s) 283, 1460, 1836, 1876, 2400
BseMI GCAATG 1 cut(s) 252
BseMII CTCAG 5 cut(s) 491, 1813, 2127, 2541, 2791
BseNI ACTGG 6 cut(s) 344, 1125, 1904, 2561, 2628, 2916
BseRI GAGGAG 3 cut(s) 10, 1259, 1262
BsgI GTGCAG 1 cut(s) 429
Bsh1236I CGCG 1 cut(s) 726
BshFI GGCC 3 cut(s) 960, 1079, 2166
BshNI GGYRCC 1 cut(s) 458
BshTI ACCGGT 1 cut(s) 815
BshVI ATCGAT 1 cut(s) 2710
BsiHKAI GWGCWC 1 cut(s) 1800
BsiHKCI CYCGRG 2 cut(s) 636, 2477
BsiSI CCGG 3 cut(s) 443, 816, 1631
BslFI GGGAC 3 cut(s) 804, 1340, 1852
BslI CCNNNNNNNGG 5 cut(s) 283, 1460, 1836, 1876, 2400
BsmAI GTCTC 2 cut(s) 48, 1175
BsmBI CGTCTC 1 cut(s) 1175
BsmFI GGGAC 3 cut(s) 804, 1340, 1852
BsmI GAATGC 3 cut(s) 2008, 2526, 2784
BsnI GGCC 3 cut(s) 960, 1079, 2166
BsoBI CYCGRG 2 cut(s) 636, 2477
Bsp1286I GDGCHC 2 cut(s) 153, 1800
Bsp1407I TGTACA 1 cut(s) 708
Bsp19I CCATGG 2 cut(s) 513, 2173
BspACI CCGC 5 cut(s) 577, 724, 726, 1066, 1549
BspANI GGCC 3 cut(s) 960, 1079, 2166
BspCNI CTCAG 5 cut(s) 490, 1812, 2128, 2542, 2790
BspDI ATCGAT 1 cut(s) 2710
BspFNI CGCG 1 cut(s) 726
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 5 cut(s) 460, 820, 1251, 1518, 2442
BspMAI CTGCAG 1 cut(s) 1878
BspMI ACCTGC 1 cut(s) 1867
BspPI GGATC 4 cut(s) 107, 686, 1511, 1524
BspQI GCTCTTC 1 cut(s) 644
BspT107I GGYRCC 1 cut(s) 458
BspTI CTTAAG 1 cut(s) 452
BsrDI GCAATG 1 cut(s) 252
BsrFI RCCGGY 1 cut(s) 815
BsrGI TGTACA 1 cut(s) 708
BsrI ACTGG 6 cut(s) 344, 1125, 1904, 2561, 2628, 2916
BssAI RCCGGY 1 cut(s) 815
BssECI CCNNGG 7 cut(s) 513, 724, 1454, 1476, 1697, 2018, 2173
BssNI GRCGYC 2 cut(s) 90, 1184
BssT1I CCWWGG 4 cut(s) 513, 1454, 2018, 2173
Bst2UI CCWGG 3 cut(s) 612, 1211, 1259
Bst4CI ACNGT 3 cut(s) 851, 1933, 2320
Bst6I CTCTTC 2 cut(s) 644, 1431
BstACI GRCGYC 2 cut(s) 90, 1184
BstAFI CTTAAG 1 cut(s) 452
BstAUI TGTACA 1 cut(s) 708
BstBAI YACGTR 1 cut(s) 2697
BstC8I GCNNGC 4 cut(s) 297, 1451, 1551, 1831
BstDEI CTNAG 8 cut(s) 228, 477, 1799, 2136, 2459, 2550, 2777, 2976
BstDSI CCRYGG 4 cut(s) 513, 724, 1697, 2173
BstEII GGTNACC 1 cut(s) 614
BstF5I GGATG 9 cut(s) 602, 664, 1267, 1354, 1584, 1605, 2632, 2687, 2803
BstFNI CGCG 1 cut(s) 726
BstMAI GTCTC 2 cut(s) 48, 1175
BstMWI GCNNNNNNNGC 5 cut(s) 224, 233, 242, 1826, 2903
BstNI CCWGG 3 cut(s) 612, 1211, 1259
BstNSI RCATGY 4 cut(s) 319, 1228, 1316, 1638
BstPAI GACNNNNGTC 1 cut(s) 2914
BstPI GGTNACC 1 cut(s) 614
BstSCI CCNGG 3 cut(s) 610, 1209, 1257
BstSFI CTRYAG 3 cut(s) 64, 534, 1874
BstUI CGCG 1 cut(s) 726
BstV2I GAAGAC 5 cut(s) 1986, 2276, 2584, 2857, 2940
BstX2I RGATCY 4 cut(s) 1516, 1662, 2151, 2416
BstYI RGATCY 4 cut(s) 1516, 1662, 2151, 2416
Bsu15I ATCGAT 1 cut(s) 2710
BsuI GTATCC 1 cut(s) 2986
BsuRI GGCC 3 cut(s) 960, 1079, 2166
BsuTUI ATCGAT 1 cut(s) 2710
BtgI CCRYGG 4 cut(s) 513, 724, 1697, 2173
BtsCI GGATG 9 cut(s) 602, 664, 1267, 1354, 1584, 1605, 2632, 2687, 2803
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 5 cut(s) 93, 1107, 1451, 1807, 2498
BveI ACCTGC 1 cut(s) 1867
Cac8I GCNNGC 4 cut(s) 297, 1451, 1551, 1831
CciI TCATGA 1 cut(s) 109
Cfr10I RCCGGY 1 cut(s) 815
Cfr13I GGNCC 4 cut(s) 818, 851, 959, 2164
Cfr42I CCGCGG 1 cut(s) 727
ClaI ATCGAT 1 cut(s) 2710
CseI GACGC 2 cut(s) 79, 1192
CsiI ACCWGGT 1 cut(s) 610
Csp6I GTAC 7 cut(s) 333, 709, 773, 1669, 1683, 1711, 2554
CspAI ACCGGT 1 cut(s) 815
CspCI CAANNNNNGTGG 4 cut(s) 1905, 1940, 2354, 2389
CviQI GTAC 7 cut(s) 333, 709, 773, 1669, 1683, 1711, 2554
DdeI CTNAG 8 cut(s) 228, 477, 1799, 2136, 2459, 2550, 2777, 2976
DraI TTTAAA 2 cut(s) 1690, 2508
EaeI YGGCCR 1 cut(s) 1077
Eam1104I CTCTTC 2 cut(s) 644, 1431
EarI CTCTTC 2 cut(s) 644, 1431
Ecl136II GAGCTC 1 cut(s) 1798
Eco130I CCWWGG 4 cut(s) 513, 1454, 2018, 2173
Eco24I GRGCYC 2 cut(s) 153, 1800
Eco47I GGWCC 2 cut(s) 818, 851
Eco53kI GAGCTC 1 cut(s) 1798
Eco72I CACGTG 1 cut(s) 2697
Eco88I CYCGRG 2 cut(s) 636, 2477
Eco91I GGTNACC 1 cut(s) 614
EcoICRI GAGCTC 1 cut(s) 1798
EcoO109I RGGNCCY 1 cut(s) 2164
EcoO65I GGTNACC 1 cut(s) 614
EcoRII CCWGG 3 cut(s) 610, 1209, 1257
EcoT14I CCWWGG 4 cut(s) 513, 1454, 2018, 2173
EcoT22I ATGCAT 1 cut(s) 400
EcoT38I GRGCYC 2 cut(s) 153, 1800
ErhI CCWWGG 4 cut(s) 513, 1454, 2018, 2173
Esp3I CGTCTC 1 cut(s) 1175
FalI AAGNNNNNCTT 8 cut(s) 446, 478, 638, 670, 1928, 1960, 2213, 2245
FaqI GGGAC 3 cut(s) 804, 1340, 1852
FauI CCCGC 1 cut(s) 1542
FbaI TGATCA 2 cut(s) 36, 1095
FokI GGATG 9 cut(s) 589, 671, 1274, 1361, 1571, 1612, 2639, 2674, 2810
FriOI GRGCYC 2 cut(s) 153, 1800
FspBI CTAG 8 cut(s) 308, 743, 776, 884, 1029, 1049, 1572, 2582
GsuI CTGGAG 7 cut(s) 854, 1193, 1371, 1476, 1506, 1853, 2933
HaeIII GGCC 3 cut(s) 960, 1079, 2166
HapII CCGG 3 cut(s) 443, 816, 1631
HgaI GACGC 2 cut(s) 79, 1192
Hin1I GRCGYC 2 cut(s) 90, 1184
HindIII AAGCTT 3 cut(s) 77, 1673, 1898
HinfI GANTC 9 cut(s) 60, 509, 539, 761, 1112, 2014, 2390, 2633, 2915
HpaII CCGG 3 cut(s) 443, 816, 1631
HphI GGTGA 3 cut(s) 483, 608, 1072
Hpy166II GTNNAC 3 cut(s) 877, 1857, 2566
Hpy8I GTNNAC 3 cut(s) 877, 1857, 2566
Hpy99I CGWCG 1 cut(s) 1299
HpyAV CCTTC 9 cut(s) 226, 590, 947, 1507, 1793, 2298, 2431, 2612, 2785
HpyCH4III ACNGT 3 cut(s) 851, 1933, 2320
HpyCH4IV ACGT 6 cut(s) 1043, 1174, 1297, 2073, 2696, 2937
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 233, 242, 1826, 2903
HpyF3I CTNAG 8 cut(s) 228, 477, 1799, 2136, 2459, 2550, 2777, 2976
HpySE526I ACGT 6 cut(s) 1043, 1174, 1297, 2073, 2696, 2937
Hsp92I GRCGYC 2 cut(s) 90, 1184
Ksp22I TGATCA 2 cut(s) 36, 1095
KspI CCGCGG 1 cut(s) 727
LguI GCTCTTC 1 cut(s) 644
LmnI GCTCC 4 cut(s) 517, 1249, 2385, 2470
LweI GCATC 4 cut(s) 652, 1552, 2302, 2416
MabI ACCWGGT 1 cut(s) 610
MaeI CTAG 8 cut(s) 308, 743, 776, 884, 1029, 1049, 1572, 2582
MaeII ACGT 6 cut(s) 1043, 1174, 1297, 2073, 2696, 2937
MaeIII GTNAC 8 cut(s) 91, 365, 614, 1167, 1464, 1574, 2024, 2347
MfeI CAATTG 2 cut(s) 914, 2430
MflI RGATCY 4 cut(s) 1516, 1662, 2151, 2416
MhlI GDGCHC 2 cut(s) 153, 1800
MlyI GAGTC 5 cut(s) 54, 770, 1106, 2399, 2924
MmeI TCCRAC 3 cut(s) 175, 235, 2595
Mph1103I ATGCAT 1 cut(s) 400
MroXI GAANNNNTTC 1 cut(s) 1440
MslI CAYNNNNRTG 1 cut(s) 1724
MspA1I CMGCKG 3 cut(s) 267, 726, 1873
MspCI CTTAAG 1 cut(s) 452
MspI CCGG 3 cut(s) 443, 816, 1631
MspR9I CCNGG 3 cut(s) 612, 1211, 1259
MunI CAATTG 2 cut(s) 914, 2430
Mva1269I GAATGC 3 cut(s) 2008, 2526, 2784
MvaI CCWGG 3 cut(s) 612, 1211, 1259
MvnI CGCG 1 cut(s) 726
MwoI GCNNNNNNNGC 5 cut(s) 224, 233, 242, 1826, 2903
NcoI CCATGG 2 cut(s) 513, 2173
NlaIV GGNNCC 5 cut(s) 460, 820, 1251, 1518, 2442
NmuCI GTSAC 6 cut(s) 91, 614, 1464, 1574, 2024, 2347
NsiI ATGCAT 1 cut(s) 400
NspI RCATGY 4 cut(s) 319, 1228, 1316, 1638
PaeR7I CTCGAG 1 cut(s) 636
PagI TCATGA 1 cut(s) 109
PaqCI CACCTGC 1 cut(s) 1867
PciI ACATGT 1 cut(s) 1224
PciSI GCTCTTC 1 cut(s) 644
PctI GAATGC 3 cut(s) 2008, 2526, 2784
PdmI GAANNNNTTC 1 cut(s) 1440
PfeI GAWTC 4 cut(s) 509, 539, 2014, 2633
PflMI CCANNNNNTGG 1 cut(s) 2400
PfoI TCCNGGA 2 cut(s) 1209, 1257
PinAI ACCGGT 1 cut(s) 815
PleI GAGTC 5 cut(s) 54, 769, 1106, 2398, 2923
PmaCI CACGTG 1 cut(s) 2697
PmlI CACGTG 1 cut(s) 2697
PpsI GAGTC 5 cut(s) 54, 769, 1106, 2398, 2923
Ppu21I YACGTR 1 cut(s) 2697
PscI ACATGT 1 cut(s) 1224
PshAI GACNNNNGTC 1 cut(s) 2914
PshBI ATTAAT 1 cut(s) 734
PsiI TTATAA 1 cut(s) 2649
Psp124BI GAGCTC 1 cut(s) 1800
Psp6I CCWGG 3 cut(s) 610, 1209, 1257
PspCI CACGTG 1 cut(s) 2697
PspEI GGTNACC 1 cut(s) 614
PspGI CCWGG 3 cut(s) 610, 1209, 1257
PspN4I GGNNCC 5 cut(s) 460, 820, 1251, 1518, 2442
PspPI GGNCC 4 cut(s) 818, 851, 959, 2164
PstI CTGCAG 1 cut(s) 1878
PsuI RGATCY 4 cut(s) 1516, 1662, 2151, 2416
PvuII CAGCTG 2 cut(s) 267, 1873
RsaI GTAC 7 cut(s) 334, 710, 774, 1670, 1684, 1712, 2555
RsaNI GTAC 7 cut(s) 333, 709, 773, 1669, 1683, 1711, 2554
RseI CAYNNNNRTG 1 cut(s) 1724
SacI GAGCTC 1 cut(s) 1800
SacII CCGCGG 1 cut(s) 727
SapI GCTCTTC 1 cut(s) 644
Sau96I GGNCC 4 cut(s) 818, 851, 959, 2164
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 5 cut(s) 54, 770, 1106, 2399, 2924
ScrFI CCNGG 3 cut(s) 612, 1211, 1259
SduI GDGCHC 2 cut(s) 153, 1800
SexAI ACCWGGT 1 cut(s) 610
SfaNI GCATC 4 cut(s) 652, 1552, 2302, 2416
SfcI CTRYAG 3 cut(s) 64, 534, 1874
Sfr274I CTCGAG 1 cut(s) 636
Sfr303I CCGCGG 1 cut(s) 727
SgrBI CCGCGG 1 cut(s) 727
SinI GGWCC 2 cut(s) 818, 851
SlaI CTCGAG 1 cut(s) 636
SmiMI CAYNNNNRTG 1 cut(s) 1724
SmlI CTYRAG 5 cut(s) 80, 146, 452, 636, 2038
SmoI CTYRAG 5 cut(s) 80, 146, 452, 636, 2038
SsiI CCGC 5 cut(s) 577, 724, 726, 1066, 1549
SspMI CTAG 8 cut(s) 308, 743, 776, 884, 1029, 1049, 1572, 2582
SstI GAGCTC 1 cut(s) 1800
StyD4I CCNGG 3 cut(s) 610, 1209, 1257
StyI CCWWGG 4 cut(s) 513, 1454, 2018, 2173
TaaI ACNGT 3 cut(s) 851, 1933, 2320
TaiI ACGT 6 cut(s) 1046, 1177, 1300, 2076, 2699, 2940
TaqI TCGA 8 cut(s) 583, 637, 768, 1779, 2424, 2710, 2848, 2960
TatI WGTACW 5 cut(s) 332, 708, 772, 1682, 2553
TauI GCSGC 2 cut(s) 579, 1068
TfiI GAWTC 4 cut(s) 509, 539, 2014, 2633
TscAI CASTG 5 cut(s) 100, 1114, 1451, 1807, 2498
TseFI GTSAC 6 cut(s) 91, 614, 1464, 1574, 2024, 2347
Tsp45I GTSAC 6 cut(s) 91, 614, 1464, 1574, 2024, 2347
TspGWI ACGGA 3 cut(s) 1577, 2098, 2224
TspRI CASTG 5 cut(s) 100, 1114, 1451, 1807, 2498
Van91I CCANNNNNTGG 1 cut(s) 2400
Vha464I CTTAAG 1 cut(s) 452
VpaK11BI GGWCC 2 cut(s) 818, 851
VspI ATTAAT 1 cut(s) 734
XapI RAATTY 5 cut(s) 338, 965, 1288, 2212, 2341
XbaI TCTAGA 1 cut(s) 307
XceI RCATGY 4 cut(s) 319, 1228, 1316, 1638
XhoI CTCGAG 1 cut(s) 636
XmnI GAANNNNTTC 1 cut(s) 1440
XspI CTAG 8 cut(s) 308, 743, 776, 884, 1029, 1049, 1572, 2582
ZrmI AGTACT 1 cut(s) 1684
Zsp2I ATGCAT 1 cut(s) 400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.