DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 838 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 866, 912 |
| AciI | CCGC | 1 cut(s) | 242 |
| AclWI | GGATC | 4 cut(s) | 584, 734, 747, 851 |
| AcoI | YGGCCR | 1 cut(s) | 331 |
| AcsI | RAATTY | 1 cut(s) | 136 |
| AfaI | GTAC | 3 cut(s) | 145, 818, 917 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 866, 912 |
| AgsI | TTSAA | 7 cut(s) | 110, 526, 559, 573, 610, 633, 938 |
| AjnI | CCWGG | 1 cut(s) | 635 |
| AluBI | AGCT | 3 cut(s) | 56, 431, 522 |
| AluI | AGCT | 3 cut(s) | 56, 431, 522 |
| Alw21I | GWGCWC | 1 cut(s) | 974 |
| Alw26I | GTCTC | 2 cut(s) | 179, 938 |
| AlwI | GGATC | 4 cut(s) | 584, 734, 747, 851 |
| AoxI | GGCC | 2 cut(s) | 331, 638 |
| ApoI | RAATTY | 1 cut(s) | 136 |
| AspLEI | GCGC | 1 cut(s) | 839 |
| AsuII | TTCGAA | 1 cut(s) | 206 |
| BalI | TGGCCA | 1 cut(s) | 333 |
| BamHI | GGATCC | 1 cut(s) | 739 |
| BanII | GRGCYC | 1 cut(s) | 163 |
| Bbv12I | GWGCWC | 1 cut(s) | 974 |
| BceAI | ACGGC | 1 cut(s) | 837 |
| BciT130I | CCWGG | 1 cut(s) | 637 |
| BcoDI | GTCTC | 2 cut(s) | 179, 938 |
| BfmI | CTRYAG | 1 cut(s) | 354 |
| Bme1390I | CCNGG | 1 cut(s) | 637 |
| BmiI | GGNNCC | 1 cut(s) | 741 |
| BmrFI | CCNGG | 1 cut(s) | 637 |
| BmrI | ACTGGG | 1 cut(s) | 711 |
| BmsI | GCATC | 3 cut(s) | 558, 788, 859 |
| BmuI | ACTGGG | 1 cut(s) | 711 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 956, 988 |
| Bpu14I | TTCGAA | 1 cut(s) | 206 |
| BpuEI | CTTGAG | 1 cut(s) | 740 |
| Bsa29I | ATCGAT | 2 cut(s) | 782, 957 |
| BsaAI | YACGTR | 1 cut(s) | 834 |
| BsaI | GGTCTC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 2 cut(s) | 293, 911 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 646, 676 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 866, 912 |
| Bse1I | ACTGG | 2 cut(s) | 571, 706 |
| BseBI | CCWGG | 1 cut(s) | 637 |
| BseCI | ATCGAT | 2 cut(s) | 782, 957 |
| BseDI | CCNNGG | 2 cut(s) | 293, 911 |
| BseGI | GGATG | 1 cut(s) | 643 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 866, 912 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BseNI | ACTGG | 2 cut(s) | 571, 706 |
| BseRI | GAGGAG | 2 cut(s) | 737, 980 |
| BshFI | GGCC | 2 cut(s) | 333, 640 |
| BshVI | ATCGAT | 2 cut(s) | 782, 957 |
| BsiHKAI | GWGCWC | 1 cut(s) | 974 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 866, 912 |
| BsmAI | GTCTC | 2 cut(s) | 179, 938 |
| BsnI | GGCC | 2 cut(s) | 333, 640 |
| Bso31I | GGTCTC | 1 cut(s) | 179 |
| Bsp119I | TTCGAA | 1 cut(s) | 206 |
| Bsp1286I | GDGCHC | 2 cut(s) | 163, 974 |
| Bsp143I | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| Bsp19I | CCATGG | 1 cut(s) | 911 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 2 cut(s) | 333, 640 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspDI | ATCGAT | 2 cut(s) | 782, 957 |
| BspHI | TCATGA | 2 cut(s) | 132, 961 |
| BspLI | GGNNCC | 1 cut(s) | 741 |
| BspPI | GGATC | 4 cut(s) | 584, 734, 747, 851 |
| BspT104I | TTCGAA | 1 cut(s) | 206 |
| BspTNI | GGTCTC | 1 cut(s) | 179 |
| BsrI | ACTGG | 2 cut(s) | 571, 706 |
| BssECI | CCNNGG | 2 cut(s) | 293, 911 |
| BssMI | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| BssT1I | CCWWGG | 1 cut(s) | 911 |
| Bst2UI | CCWGG | 1 cut(s) | 637 |
| Bst4CI | ACNGT | 3 cut(s) | 29, 214, 537 |
| BstBAI | YACGTR | 1 cut(s) | 834 |
| BstBI | TTCGAA | 1 cut(s) | 206 |
| BstC8I | GCNNGC | 4 cut(s) | 23, 115, 675, 826 |
| BstDEI | CTNAG | 3 cut(s) | 162, 432, 928 |
| BstDSI | CCRYGG | 1 cut(s) | 911 |
| BstF5I | GGATG | 1 cut(s) | 643 |
| BstHHI | GCGC | 1 cut(s) | 839 |
| BstKTI | GATC | 9 cut(s) | 132, 372, 438, 592, 742, 859, 957, 961, 990 |
| BstMAI | GTCTC | 2 cut(s) | 179, 938 |
| BstMBI | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 470, 834 |
| BstNI | CCWGG | 1 cut(s) | 637 |
| BstNSI | RCATGY | 1 cut(s) | 464 |
| BstSCI | CCNGG | 1 cut(s) | 635 |
| BstSFI | CTRYAG | 1 cut(s) | 354 |
| BstX2I | RGATCY | 3 cut(s) | 589, 739, 856 |
| BstYI | RGATCY | 3 cut(s) | 589, 739, 856 |
| Bsu15I | ATCGAT | 2 cut(s) | 782, 957 |
| BsuRI | GGCC | 2 cut(s) | 333, 640 |
| BsuTUI | ATCGAT | 2 cut(s) | 782, 957 |
| BtgI | CCRYGG | 1 cut(s) | 911 |
| BtsCI | GGATG | 1 cut(s) | 643 |
| BtsI | GCAGTG | 1 cut(s) | 656 |
| BtsIMutI | CAGTG | 4 cut(s) | 25, 564, 630, 656 |
| Cac8I | GCNNGC | 4 cut(s) | 23, 115, 675, 826 |
| CciI | TCATGA | 2 cut(s) | 132, 961 |
| CfoI | GCGC | 1 cut(s) | 839 |
| ClaI | ATCGAT | 2 cut(s) | 782, 957 |
| Csp6I | GTAC | 3 cut(s) | 144, 817, 916 |
| CviAII | CATG | 5 cut(s) | 133, 182, 461, 912, 962 |
| CviQI | GTAC | 3 cut(s) | 144, 817, 916 |
| DdeI | CTNAG | 3 cut(s) | 162, 432, 928 |
| DpnI | GATC | 9 cut(s) | 131, 371, 437, 591, 741, 858, 956, 960, 989 |
| DpnII | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| DraI | TTTAAA | 1 cut(s) | 894 |
| EaeI | YGGCCR | 1 cut(s) | 331 |
| EciI | GGCGGA | 1 cut(s) | 231 |
| Eco130I | CCWWGG | 1 cut(s) | 911 |
| Eco24I | GRGCYC | 1 cut(s) | 163 |
| Eco31I | GGTCTC | 1 cut(s) | 179 |
| Eco32I | GATATC | 1 cut(s) | 313 |
| EcoRII | CCWGG | 1 cut(s) | 635 |
| EcoRV | GATATC | 1 cut(s) | 313 |
| EcoT14I | CCWWGG | 1 cut(s) | 911 |
| EcoT22I | ATGCAT | 1 cut(s) | 852 |
| EcoT38I | GRGCYC | 1 cut(s) | 163 |
| ErhI | CCWWGG | 1 cut(s) | 911 |
| FaeI | CATG | 5 cut(s) | 136, 185, 464, 915, 965 |
| FatI | CATG | 5 cut(s) | 132, 181, 460, 911, 961 |
| FokI | GGATG | 1 cut(s) | 630 |
| FriOI | GRGCYC | 1 cut(s) | 163 |
| FspI | TGCGCA | 1 cut(s) | 838 |
| GlaI | GCGC | 1 cut(s) | 838 |
| HaeIII | GGCC | 2 cut(s) | 333, 640 |
| HhaI | GCGC | 1 cut(s) | 839 |
| Hin1II | CATG | 5 cut(s) | 136, 185, 464, 915, 965 |
| Hin6I | GCGC | 1 cut(s) | 837 |
| HinP1I | GCGC | 1 cut(s) | 837 |
| HincII | GTYRAC | 1 cut(s) | 872 |
| HindII | GTYRAC | 1 cut(s) | 872 |
| HindIII | AAGCTT | 1 cut(s) | 520 |
| HinfI | GANTC | 2 cut(s) | 62, 901 |
| Hpy166II | GTNNAC | 2 cut(s) | 819, 872 |
| Hpy188I | TCNGA | 4 cut(s) | 378, 419, 451, 900 |
| Hpy188III | TCNNGA | 9 cut(s) | 133, 316, 556, 593, 602, 743, 854, 935, 962 |
| Hpy8I | GTNNAC | 2 cut(s) | 819, 872 |
| HpyAV | CCTTC | 3 cut(s) | 484, 520, 675 |
| HpyCH4III | ACNGT | 3 cut(s) | 29, 214, 537 |
| HpyCH4IV | ACGT | 1 cut(s) | 833 |
| HpyCH4V | TGCA | 6 cut(s) | 25, 155, 271, 458, 774, 850 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 470, 834 |
| HpyF3I | CTNAG | 3 cut(s) | 162, 432, 928 |
| HpySE526I | ACGT | 1 cut(s) | 833 |
| Hsp92II | CATG | 5 cut(s) | 136, 185, 464, 915, 965 |
| HspAI | GCGC | 1 cut(s) | 837 |
| Kzo9I | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| LweI | GCATC | 3 cut(s) | 558, 788, 859 |
| MaeII | ACGT | 1 cut(s) | 833 |
| MaeIII | GTNAC | 1 cut(s) | 278 |
| MalI | GATC | 9 cut(s) | 131, 371, 437, 591, 741, 858, 956, 960, 989 |
| MboI | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| MboII | GAAGA | 2 cut(s) | 437, 950 |
| MflI | RGATCY | 3 cut(s) | 589, 739, 856 |
| MhlI | GDGCHC | 2 cut(s) | 163, 974 |
| MlsI | TGGCCA | 1 cut(s) | 333 |
| MluCI | AATT | 4 cut(s) | 136, 284, 381, 605 |
| MluNI | TGGCCA | 1 cut(s) | 333 |
| MmeI | TCCRAC | 1 cut(s) | 884 |
| MnlI | CCTC | 7 cut(s) | 303, 347, 379, 651, 672, 715, 958 |
| Mox20I | TGGCCA | 1 cut(s) | 333 |
| Mph1103I | ATGCAT | 1 cut(s) | 852 |
| MscI | TGGCCA | 1 cut(s) | 333 |
| MseI | TTAA | 6 cut(s) | 219, 299, 531, 651, 786, 893 |
| MslI | CAYNNNNRTG | 1 cut(s) | 769 |
| Msp20I | TGGCCA | 1 cut(s) | 333 |
| MspR9I | CCNGG | 1 cut(s) | 637 |
| MvaI | CCWGG | 1 cut(s) | 637 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 470, 834 |
| NcoI | CCATGG | 1 cut(s) | 911 |
| NdeII | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| NlaIII | CATG | 5 cut(s) | 136, 185, 464, 915, 965 |
| NlaIV | GGNNCC | 1 cut(s) | 741 |
| NsbI | TGCGCA | 1 cut(s) | 838 |
| NsiI | ATGCAT | 1 cut(s) | 852 |
| NspI | RCATGY | 1 cut(s) | 464 |
| NspV | TTCGAA | 1 cut(s) | 206 |
| PagI | TCATGA | 2 cut(s) | 132, 961 |
| PfeI | GAWTC | 2 cut(s) | 62, 901 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 866, 912 |
| Ppu21I | YACGTR | 1 cut(s) | 834 |
| Psp6I | CCWGG | 1 cut(s) | 635 |
| PspGI | CCWGG | 1 cut(s) | 635 |
| PspN4I | GGNNCC | 1 cut(s) | 741 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 908, 940 |
| PsuI | RGATCY | 3 cut(s) | 589, 739, 856 |
| RsaI | GTAC | 3 cut(s) | 145, 818, 917 |
| RsaNI | GTAC | 3 cut(s) | 144, 817, 916 |
| RseI | CAYNNNNRTG | 1 cut(s) | 769 |
| SaqAI | TTAA | 6 cut(s) | 219, 299, 531, 651, 786, 893 |
| Sau3AI | GATC | 9 cut(s) | 129, 369, 435, 589, 739, 856, 954, 958, 987 |
| ScrFI | CCNGG | 1 cut(s) | 637 |
| SduI | GDGCHC | 2 cut(s) | 163, 974 |
| SetI | ASST | 8 cut(s) | 58, 339, 433, 524, 531, 638, 836, 995 |
| SfaNI | GCATC | 3 cut(s) | 558, 788, 859 |
| SfcI | CTRYAG | 1 cut(s) | 354 |
| SfuI | TTCGAA | 1 cut(s) | 206 |
| SmiI | ATTTAAAT | 1 cut(s) | 894 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 769 |
| SmlI | CTYRAG | 1 cut(s) | 719 |
| SmoI | CTYRAG | 1 cut(s) | 719 |
| Sse9I | AATT | 4 cut(s) | 136, 284, 381, 605 |
| SsiI | CCGC | 1 cut(s) | 242 |
| StyD4I | CCNGG | 1 cut(s) | 635 |
| StyI | CCWWGG | 1 cut(s) | 911 |
| SwaI | ATTTAAAT | 1 cut(s) | 894 |
| TaaI | ACNGT | 3 cut(s) | 29, 214, 537 |
| TaiI | ACGT | 1 cut(s) | 836 |
| TaqI | TCGA | 4 cut(s) | 60, 206, 782, 957 |
| TasI | AATT | 4 cut(s) | 136, 284, 381, 605 |
| TfiI | GAWTC | 2 cut(s) | 62, 901 |
| Tru1I | TTAA | 6 cut(s) | 219, 299, 531, 651, 786, 893 |
| Tru9I | TTAA | 6 cut(s) | 219, 299, 531, 651, 786, 893 |
| TscAI | CASTG | 4 cut(s) | 32, 571, 630, 663 |
| TspDTI | ATGAA | 6 cut(s) | 57, 102, 149, 190, 438, 822 |
| TspGWI | ACGGA | 1 cut(s) | 131 |
| TspRI | CASTG | 4 cut(s) | 32, 571, 630, 663 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 866, 912 |
| XapI | RAATTY | 1 cut(s) | 136 |
| XceI | RCATGY | 1 cut(s) | 464 |
| Zsp2I | ATGCAT | 1 cut(s) | 852 |