DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 32 |
| AgsI | TTSAA | 3 cut(s) | 19, 112, 221 |
| AluBI | AGCT | 1 cut(s) | 227 |
| AluI | AGCT | 1 cut(s) | 227 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 1 cut(s) | 58 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| BmsI | GCATC | 1 cut(s) | 221 |
| Bse1I | ACTGG | 3 cut(s) | 12, 60, 207 |
| BseNI | ACTGG | 3 cut(s) | 12, 60, 207 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BsgI | GTGCAG | 1 cut(s) | 30 |
| BsrI | ACTGG | 3 cut(s) | 12, 60, 207 |
| BstC8I | GCNNGC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 45 |
| Csp6I | GTAC | 1 cut(s) | 31 |
| CviAII | CATG | 1 cut(s) | 162 |
| CviJI | RGCY | 1 cut(s) | 227 |
| CviKI_1 | RGCY | 1 cut(s) | 227 |
| CviQI | GTAC | 1 cut(s) | 31 |
| DdeI | CTNAG | 1 cut(s) | 126 |
| FaeI | CATG | 1 cut(s) | 165 |
| FaiI | YATR | 3 cut(s) | 66, 80, 163 |
| FatI | CATG | 1 cut(s) | 161 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| GluI | GCNGC | 1 cut(s) | 180 |
| Hin1II | CATG | 1 cut(s) | 165 |
| HindIII | AAGCTT | 1 cut(s) | 225 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| HpyAV | CCTTC | 1 cut(s) | 118 |
| HpyCH4V | TGCA | 4 cut(s) | 47, 72, 165, 212 |
| HpyF3I | CTNAG | 1 cut(s) | 126 |
| Hsp92II | CATG | 1 cut(s) | 165 |
| LpnPI | CCDG | 6 cut(s) | 25, 57, 73, 83, 99, 220 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 1 cut(s) | 221 |
| MboII | GAAGA | 1 cut(s) | 37 |
| MfeI | CAATTG | 1 cut(s) | 216 |
| MluCI | AATT | 3 cut(s) | 114, 170, 216 |
| MseI | TTAA | 2 cut(s) | 173, 229 |
| MunI | CAATTG | 1 cut(s) | 216 |
| NlaIII | CATG | 1 cut(s) | 165 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| RsaI | GTAC | 1 cut(s) | 32 |
| RsaNI | GTAC | 1 cut(s) | 31 |
| SaqAI | TTAA | 2 cut(s) | 173, 229 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SetI | ASST | 1 cut(s) | 229 |
| SfaNI | GCATC | 1 cut(s) | 221 |
| SgeI | CNNG | 8 cut(s) | 24, 56, 72, 81, 98, 110, 174, 219 |
| Sse9I | AATT | 3 cut(s) | 114, 170, 216 |
| TasI | AATT | 3 cut(s) | 114, 170, 216 |
| TatI | WGTACW | 1 cut(s) | 30 |
| Tru1I | TTAA | 2 cut(s) | 173, 229 |
| Tru9I | TTAA | 2 cut(s) | 173, 229 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 1 cut(s) | 67 |
| TspRI | CASTG | 1 cut(s) | 214 |