DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 367 |
| AccI | GTMKAC | 1 cut(s) | 87 |
| AccIII | TCCGGA | 1 cut(s) | 298 |
| AciI | CCGC | 1 cut(s) | 375 |
| AclWI | GGATC | 3 cut(s) | 290, 309, 443 |
| AcsI | RAATTY | 1 cut(s) | 798 |
| AcuI | CTGAAG | 1 cut(s) | 417 |
| AfaI | GTAC | 3 cut(s) | 271, 527, 729 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 718 |
| AflIII | ACRYGT | 1 cut(s) | 509 |
| AgsI | TTSAA | 2 cut(s) | 7, 242 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 687, 719 |
| AluBI | AGCT | 1 cut(s) | 436 |
| AluI | AGCT | 1 cut(s) | 436 |
| AlwI | GGATC | 3 cut(s) | 290, 309, 443 |
| Aor13HI | TCCGGA | 1 cut(s) | 298 |
| ApeKI | GCWGC | 1 cut(s) | 276 |
| ApoI | RAATTY | 1 cut(s) | 798 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 570, 602 |
| AseI | ATTAAT | 1 cut(s) | 657 |
| BaeGI | GKGCMC | 1 cut(s) | 128 |
| BanI | GGYRCC | 1 cut(s) | 367 |
| BbvI | GCAGC | 1 cut(s) | 263 |
| BciVI | GTATCC | 1 cut(s) | 719 |
| BfaI | CTAG | 1 cut(s) | 446 |
| BfuI | GTATCC | 1 cut(s) | 719 |
| BisI | GCNGC | 1 cut(s) | 277 |
| BlsI | GCNGC | 1 cut(s) | 278 |
| BmcAI | AGTACT | 1 cut(s) | 271 |
| BmiI | GGNNCC | 1 cut(s) | 369 |
| BmsI | GCATC | 1 cut(s) | 497 |
| BpuEI | CTTGAG | 1 cut(s) | 665 |
| BsaAI | YACGTR | 1 cut(s) | 512 |
| BsaBI | GATNNNNATC | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 1 cut(s) | 620 |
| BsaWI | WCCGGW | 1 cut(s) | 298 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 601, 631 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 718 |
| Bse1I | ACTGG | 2 cut(s) | 277, 580 |
| Bse8I | GATNNNNATC | 1 cut(s) | 300 |
| BseAI | TCCGGA | 1 cut(s) | 298 |
| BseDI | CCNNGG | 1 cut(s) | 620 |
| BseGI | GGATG | 2 cut(s) | 598, 655 |
| BseJI | GATNNNNATC | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 718 |
| BseNI | ACTGG | 2 cut(s) | 277, 580 |
| BseSI | GKGCMC | 1 cut(s) | 128 |
| BseXI | GCAGC | 1 cut(s) | 263 |
| BsgI | GTGCAG | 1 cut(s) | 64 |
| BshNI | GGYRCC | 1 cut(s) | 367 |
| BsiSI | CCGG | 1 cut(s) | 299 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 718 |
| Bsp1286I | GDGCHC | 1 cut(s) | 128 |
| Bsp13I | TCCGGA | 1 cut(s) | 298 |
| Bsp143I | GATC | 3 cut(s) | 295, 301, 448 |
| BspACI | CCGC | 1 cut(s) | 375 |
| BspEI | TCCGGA | 1 cut(s) | 298 |
| BspLI | GGNNCC | 1 cut(s) | 369 |
| BspPI | GGATC | 3 cut(s) | 290, 309, 443 |
| BspT107I | GGYRCC | 1 cut(s) | 367 |
| BsrI | ACTGG | 2 cut(s) | 277, 580 |
| BssECI | CCNNGG | 1 cut(s) | 620 |
| BssMI | GATC | 3 cut(s) | 295, 301, 448 |
| BssT1I | CCWWGG | 1 cut(s) | 620 |
| Bst4CI | ACNGT | 5 cut(s) | 64, 259, 269, 545, 756 |
| BstBAI | YACGTR | 1 cut(s) | 512 |
| BstC8I | GCNNGC | 2 cut(s) | 438, 535 |
| BstDEI | CTNAG | 1 cut(s) | 773 |
| BstF5I | GGATG | 2 cut(s) | 598, 655 |
| BstKTI | GATC | 3 cut(s) | 298, 304, 451 |
| BstMBI | GATC | 3 cut(s) | 295, 301, 448 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 374 |
| BstNSI | RCATGY | 2 cut(s) | 16, 537 |
| BstSLI | GKGCMC | 1 cut(s) | 128 |
| BstV1I | GCAGC | 1 cut(s) | 263 |
| BstX2I | RGATCY | 2 cut(s) | 301, 448 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 621 |
| BstYI | RGATCY | 2 cut(s) | 301, 448 |
| BsuI | GTATCC | 1 cut(s) | 719 |
| BtsCI | GGATG | 2 cut(s) | 598, 655 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 2 cut(s) | 438, 535 |
| Csp6I | GTAC | 3 cut(s) | 270, 526, 728 |
| CviAII | CATG | 4 cut(s) | 13, 163, 534, 714 |
| CviJI | RGCY | 6 cut(s) | 146, 276, 395, 413, 436, 440 |
| CviKI_1 | RGCY | 6 cut(s) | 146, 276, 395, 413, 436, 440 |
| CviQI | GTAC | 3 cut(s) | 270, 526, 728 |
| DdeI | CTNAG | 1 cut(s) | 773 |
| DpnI | GATC | 3 cut(s) | 297, 303, 450 |
| DpnII | GATC | 3 cut(s) | 295, 301, 448 |
| Eco130I | CCWWGG | 1 cut(s) | 620 |
| Eco57I | CTGAAG | 1 cut(s) | 417 |
| EcoT14I | CCWWGG | 1 cut(s) | 620 |
| EcoT22I | ATGCAT | 2 cut(s) | 322, 535 |
| ErhI | CCWWGG | 1 cut(s) | 620 |
| FaeI | CATG | 4 cut(s) | 16, 166, 537, 717 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 815 |
| FatI | CATG | 4 cut(s) | 12, 162, 533, 713 |
| FblI | GTMKAC | 1 cut(s) | 87 |
| Fnu4HI | GCNGC | 1 cut(s) | 277 |
| FokI | GGATG | 2 cut(s) | 585, 662 |
| Fsp4HI | GCNGC | 1 cut(s) | 277 |
| FspBI | CTAG | 1 cut(s) | 446 |
| GluI | GCNGC | 1 cut(s) | 277 |
| HapII | CCGG | 1 cut(s) | 299 |
| Hin1II | CATG | 4 cut(s) | 16, 166, 537, 717 |
| HincII | GTYRAC | 1 cut(s) | 745 |
| HindII | GTYRAC | 1 cut(s) | 745 |
| HinfI | GANTC | 1 cut(s) | 733 |
| HpaII | CCGG | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 745 |
| Hpy188I | TCNGA | 1 cut(s) | 675 |
| Hpy188III | TCNNGA | 5 cut(s) | 299, 308, 446, 452, 644 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 745 |
| HpyAV | CCTTC | 2 cut(s) | 42, 381 |
| HpyCH4III | ACNGT | 5 cut(s) | 64, 259, 269, 545, 756 |
| HpyCH4IV | ACGT | 1 cut(s) | 511 |
| HpyCH4V | TGCA | 9 cut(s) | 45, 246, 320, 338, 460, 533, 559, 627, 717 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 374 |
| HpyF3I | CTNAG | 1 cut(s) | 773 |
| HpySE526I | ACGT | 1 cut(s) | 511 |
| Hsp92II | CATG | 4 cut(s) | 16, 166, 537, 717 |
| Kpn2I | TCCGGA | 1 cut(s) | 298 |
| Kzo9I | GATC | 3 cut(s) | 295, 301, 448 |
| LpnPI | CCDG | 6 cut(s) | 258, 312, 321, 422, 561, 675 |
| Lsp1109I | GCAGC | 1 cut(s) | 263 |
| LweI | GCATC | 1 cut(s) | 497 |
| MaeI | CTAG | 1 cut(s) | 446 |
| MaeII | ACGT | 1 cut(s) | 511 |
| MaeIII | GTNAC | 2 cut(s) | 64, 512 |
| MalI | GATC | 3 cut(s) | 297, 303, 450 |
| MboI | GATC | 3 cut(s) | 295, 301, 448 |
| MboII | GAAGA | 3 cut(s) | 93, 296, 835 |
| MfeI | CAATTG | 1 cut(s) | 737 |
| MflI | RGATCY | 2 cut(s) | 301, 448 |
| MhlI | GDGCHC | 1 cut(s) | 128 |
| MluCI | AATT | 8 cut(s) | 30, 154, 326, 419, 634, 678, 737, 798 |
| MmeI | TCCRAC | 1 cut(s) | 638 |
| MnlI | CCTC | 3 cut(s) | 138, 385, 640 |
| Mph1103I | ATGCAT | 2 cut(s) | 322, 535 |
| MroI | TCCGGA | 1 cut(s) | 298 |
| MseI | TTAA | 4 cut(s) | 114, 422, 657, 835 |
| MslI | CAYNNNNRTG | 2 cut(s) | 465, 478 |
| MspI | CCGG | 1 cut(s) | 299 |
| MunI | CAATTG | 1 cut(s) | 737 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 374 |
| NdeII | GATC | 3 cut(s) | 295, 301, 448 |
| NlaIII | CATG | 4 cut(s) | 16, 166, 537, 717 |
| NlaIV | GGNNCC | 1 cut(s) | 369 |
| NsiI | ATGCAT | 2 cut(s) | 322, 535 |
| NspI | RCATGY | 2 cut(s) | 16, 537 |
| PaeI | GCATGC | 1 cut(s) | 537 |
| PfeI | GAWTC | 1 cut(s) | 733 |
| PkrI | GCNGC | 1 cut(s) | 278 |
| Ppu21I | YACGTR | 1 cut(s) | 512 |
| PshBI | ATTAAT | 1 cut(s) | 657 |
| PspN4I | GGNNCC | 1 cut(s) | 369 |
| PsuI | RGATCY | 2 cut(s) | 301, 448 |
| RsaI | GTAC | 3 cut(s) | 271, 527, 729 |
| RsaNI | GTAC | 3 cut(s) | 270, 526, 728 |
| RseI | CAYNNNNRTG | 2 cut(s) | 465, 478 |
| SaqAI | TTAA | 4 cut(s) | 114, 422, 657, 835 |
| SatI | GCNGC | 1 cut(s) | 277 |
| Sau3AI | GATC | 3 cut(s) | 295, 301, 448 |
| ScaI | AGTACT | 1 cut(s) | 271 |
| SduI | GDGCHC | 1 cut(s) | 128 |
| SetI | ASST | 4 cut(s) | 373, 438, 514, 779 |
| SfaNI | GCATC | 1 cut(s) | 497 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 465, 478 |
| SmlI | CTYRAG | 1 cut(s) | 644 |
| SmoI | CTYRAG | 1 cut(s) | 644 |
| SphI | GCATGC | 1 cut(s) | 537 |
| Sse9I | AATT | 8 cut(s) | 30, 154, 326, 419, 634, 678, 737, 798 |
| SsiI | CCGC | 1 cut(s) | 375 |
| SspI | AATATT | 1 cut(s) | 363 |
| SspMI | CTAG | 1 cut(s) | 446 |
| StyI | CCWWGG | 1 cut(s) | 620 |
| TaaI | ACNGT | 5 cut(s) | 64, 259, 269, 545, 756 |
| TaiI | ACGT | 1 cut(s) | 514 |
| TasI | AATT | 8 cut(s) | 30, 154, 326, 419, 634, 678, 737, 798 |
| TatI | WGTACW | 1 cut(s) | 269 |
| TfiI | GAWTC | 1 cut(s) | 733 |
| Tru1I | TTAA | 4 cut(s) | 114, 422, 657, 835 |
| Tru9I | TTAA | 4 cut(s) | 114, 422, 657, 835 |
| TscAI | CASTG | 1 cut(s) | 67 |
| TseI | GCWGC | 1 cut(s) | 276 |
| TspDTI | ATGAA | 3 cut(s) | 93, 278, 675 |
| TspRI | CASTG | 1 cut(s) | 67 |
| VspI | ATTAAT | 1 cut(s) | 657 |
| XapI | RAATTY | 1 cut(s) | 798 |
| XbaI | TCTAGA | 1 cut(s) | 445 |
| XceI | RCATGY | 2 cut(s) | 16, 537 |
| XmiI | GTMKAC | 1 cut(s) | 87 |
| XspI | CTAG | 1 cut(s) | 446 |
| ZrmI | AGTACT | 1 cut(s) | 271 |
| Zsp2I | ATGCAT | 2 cut(s) | 322, 535 |