DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rep_fac-A_C | PF08646 | 27 - 110 | 2.2e-07 | Replication factor-A C terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 75 |
| AclWI | GGATC | 2 cut(s) | 242, 383 |
| AgsI | TTSAA | 3 cut(s) | 245, 328, 402 |
| AluBI | AGCT | 1 cut(s) | 290 |
| AluI | AGCT | 1 cut(s) | 290 |
| AlwI | GGATC | 2 cut(s) | 242, 383 |
| ApeKI | GCWGC | 1 cut(s) | 144 |
| BaeGI | GKGCMC | 1 cut(s) | 338 |
| BbvI | GCAGC | 1 cut(s) | 131 |
| BisI | GCNGC | 1 cut(s) | 145 |
| BlsI | GCNGC | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 1 cut(s) | 356 |
| BseMI | GCAATG | 1 cut(s) | 356 |
| BseSI | GKGCMC | 1 cut(s) | 338 |
| BseXI | GCAGC | 1 cut(s) | 131 |
| Bsp1286I | GDGCHC | 1 cut(s) | 338 |
| Bsp143I | GATC | 3 cut(s) | 175, 247, 388 |
| BspPI | GGATC | 2 cut(s) | 242, 383 |
| BsrDI | GCAATG | 1 cut(s) | 356 |
| BssMI | GATC | 3 cut(s) | 175, 247, 388 |
| Bst4CI | ACNGT | 6 cut(s) | 65, 141, 160, 257, 268, 297 |
| Bst6I | CTCTTC | 1 cut(s) | 219 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 202 |
| BstKTI | GATC | 3 cut(s) | 178, 250, 391 |
| BstMBI | GATC | 3 cut(s) | 175, 247, 388 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 202 |
| BstNSI | RCATGY | 1 cut(s) | 135 |
| BstSLI | GKGCMC | 1 cut(s) | 338 |
| BstV1I | GCAGC | 1 cut(s) | 131 |
| BstX2I | RGATCY | 2 cut(s) | 247, 388 |
| BstYI | RGATCY | 2 cut(s) | 247, 388 |
| BtsIMutI | CAGTG | 5 cut(s) | 70, 146, 165, 262, 412 |
| CseI | GACGC | 1 cut(s) | 27 |
| CviAII | CATG | 7 cut(s) | 110, 132, 197, 219, 233, 381, 393 |
| CviJI | RGCY | 5 cut(s) | 86, 117, 229, 263, 290 |
| CviKI_1 | RGCY | 5 cut(s) | 86, 117, 229, 263, 290 |
| DpnI | GATC | 3 cut(s) | 177, 249, 390 |
| DpnII | GATC | 3 cut(s) | 175, 247, 388 |
| Eam1104I | CTCTTC | 1 cut(s) | 219 |
| EarI | CTCTTC | 1 cut(s) | 219 |
| FaeI | CATG | 7 cut(s) | 113, 135, 200, 222, 236, 384, 396 |
| FatI | CATG | 7 cut(s) | 109, 131, 196, 218, 232, 380, 392 |
| FblI | GTMKAC | 1 cut(s) | 75 |
| Fnu4HI | GCNGC | 1 cut(s) | 145 |
| Fsp4HI | GCNGC | 1 cut(s) | 145 |
| GluI | GCNGC | 1 cut(s) | 145 |
| HgaI | GACGC | 1 cut(s) | 27 |
| Hin1II | CATG | 7 cut(s) | 113, 135, 200, 222, 236, 384, 396 |
| HinfI | GANTC | 1 cut(s) | 183 |
| Hpy166II | GTNNAC | 2 cut(s) | 76, 137 |
| Hpy188I | TCNGA | 1 cut(s) | 305 |
| Hpy188III | TCNNGA | 2 cut(s) | 191, 325 |
| Hpy8I | GTNNAC | 2 cut(s) | 76, 137 |
| HpyAV | CCTTC | 2 cut(s) | 23, 107 |
| HpyCH4III | ACNGT | 6 cut(s) | 65, 141, 160, 257, 268, 297 |
| HpyCH4V | TGCA | 5 cut(s) | 81, 147, 205, 315, 344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 202 |
| Hsp92II | CATG | 7 cut(s) | 113, 135, 200, 222, 236, 384, 396 |
| Kzo9I | GATC | 3 cut(s) | 175, 247, 388 |
| LpnPI | CCDG | 4 cut(s) | 103, 211, 300, 378 |
| Lsp1109I | GCAGC | 1 cut(s) | 131 |
| MaeIII | GTNAC | 1 cut(s) | 221 |
| MalI | GATC | 3 cut(s) | 177, 249, 390 |
| MboI | GATC | 3 cut(s) | 175, 247, 388 |
| MboII | GAAGA | 3 cut(s) | 175, 206, 257 |
| MfeI | CAATTG | 1 cut(s) | 6 |
| MflI | RGATCY | 2 cut(s) | 247, 388 |
| MhlI | GDGCHC | 1 cut(s) | 338 |
| MluCI | AATT | 2 cut(s) | 6, 44 |
| MnlI | CCTC | 4 cut(s) | 4, 121, 222, 272 |
| MseI | TTAA | 1 cut(s) | 18 |
| MunI | CAATTG | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 202 |
| NdeII | GATC | 3 cut(s) | 175, 247, 388 |
| NlaIII | CATG | 7 cut(s) | 113, 135, 200, 222, 236, 384, 396 |
| NspI | RCATGY | 1 cut(s) | 135 |
| PfeI | GAWTC | 1 cut(s) | 183 |
| PkrI | GCNGC | 1 cut(s) | 146 |
| PsuI | RGATCY | 2 cut(s) | 247, 388 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| SatI | GCNGC | 1 cut(s) | 145 |
| Sau3AI | GATC | 3 cut(s) | 175, 247, 388 |
| SduI | GDGCHC | 1 cut(s) | 338 |
| SetI | ASST | 3 cut(s) | 214, 276, 292 |
| Sse9I | AATT | 2 cut(s) | 6, 44 |
| TaaI | ACNGT | 6 cut(s) | 65, 141, 160, 257, 268, 297 |
| TasI | AATT | 2 cut(s) | 6, 44 |
| TfiI | GAWTC | 1 cut(s) | 183 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| TscAI | CASTG | 4 cut(s) | 70, 146, 165, 262 |
| TseI | GCWGC | 1 cut(s) | 144 |
| TspDTI | ATGAA | 2 cut(s) | 126, 221 |
| TspRI | CASTG | 4 cut(s) | 70, 146, 165, 262 |
| XceI | RCATGY | 1 cut(s) | 135 |
| XmiI | GTMKAC | 1 cut(s) | 75 |