DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 61 |
| AcoI | YGGCCR | 1 cut(s) | 298 |
| AcsI | RAATTY | 1 cut(s) | 16 |
| AcuI | CTGAAG | 1 cut(s) | 295 |
| AfaI | GTAC | 2 cut(s) | 34, 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 73 |
| AgsI | TTSAA | 2 cut(s) | 83, 332 |
| AluBI | AGCT | 3 cut(s) | 28, 157, 173 |
| AluI | AGCT | 3 cut(s) | 28, 157, 173 |
| Alw21I | GWGCWC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 1 cut(s) | 332 |
| AoxI | GGCC | 1 cut(s) | 298 |
| ApeKI | GCWGC | 2 cut(s) | 154, 292 |
| ApoI | RAATTY | 1 cut(s) | 16 |
| BanII | GRGCYC | 1 cut(s) | 30 |
| Bbv12I | GWGCWC | 1 cut(s) | 30 |
| BbvI | GCAGC | 2 cut(s) | 166, 304 |
| BccI | CCATC | 1 cut(s) | 194 |
| BceAI | ACGGC | 1 cut(s) | 313 |
| BclI | TGATCA | 1 cut(s) | 343 |
| BcoDI | GTCTC | 1 cut(s) | 332 |
| BfmI | CTRYAG | 2 cut(s) | 57, 166 |
| BfuAI | ACCTGC | 1 cut(s) | 61 |
| BisI | GCNGC | 2 cut(s) | 155, 293 |
| BlsI | GCNGC | 2 cut(s) | 156, 294 |
| BmsI | GCATC | 1 cut(s) | 209 |
| BsaWI | WCCGGW | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 73 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| BseGI | GGATG | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BseMII | CTCAG | 1 cut(s) | 43 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| BseXI | GCAGC | 2 cut(s) | 166, 304 |
| BshFI | GGCC | 1 cut(s) | 300 |
| BsiHKAI | GWGCWC | 1 cut(s) | 30 |
| BsiSI | CCGG | 1 cut(s) | 254 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 73 |
| BsmAI | GTCTC | 1 cut(s) | 332 |
| BsnI | GGCC | 1 cut(s) | 300 |
| Bsp1286I | GDGCHC | 1 cut(s) | 30 |
| Bsp143I | GATC | 2 cut(s) | 225, 343 |
| BspANI | GGCC | 1 cut(s) | 300 |
| BspCNI | CTCAG | 1 cut(s) | 42 |
| BspMAI | CTGCAG | 1 cut(s) | 170 |
| BspMI | ACCTGC | 1 cut(s) | 61 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssMI | GATC | 2 cut(s) | 225, 343 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| Bst6I | CTCTTC | 1 cut(s) | 327 |
| BstDEI | CTNAG | 1 cut(s) | 29 |
| BstF5I | GGATG | 1 cut(s) | 224 |
| BstKTI | GATC | 2 cut(s) | 228, 346 |
| BstMAI | GTCTC | 1 cut(s) | 332 |
| BstMBI | GATC | 2 cut(s) | 225, 343 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 34, 228 |
| BstNSI | RCATGY | 1 cut(s) | 356 |
| BstSFI | CTRYAG | 2 cut(s) | 57, 166 |
| BstV1I | GCAGC | 2 cut(s) | 166, 304 |
| BsuRI | GGCC | 1 cut(s) | 300 |
| BtsCI | GGATG | 1 cut(s) | 224 |
| BveI | ACCTGC | 1 cut(s) | 61 |
| Csp6I | GTAC | 2 cut(s) | 33, 208 |
| CviAII | CATG | 2 cut(s) | 284, 353 |
| CviJI | RGCY | 4 cut(s) | 28, 157, 173, 300 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 157, 173, 300 |
| CviQI | GTAC | 2 cut(s) | 33, 208 |
| DdeI | CTNAG | 1 cut(s) | 29 |
| DpnI | GATC | 2 cut(s) | 227, 345 |
| DpnII | GATC | 2 cut(s) | 225, 343 |
| DraI | TTTAAA | 1 cut(s) | 123 |
| EaeI | YGGCCR | 1 cut(s) | 298 |
| Eam1104I | CTCTTC | 1 cut(s) | 327 |
| EarI | CTCTTC | 1 cut(s) | 327 |
| Ecl136II | GAGCTC | 1 cut(s) | 28 |
| Eco24I | GRGCYC | 1 cut(s) | 30 |
| Eco53kI | GAGCTC | 1 cut(s) | 28 |
| Eco57I | CTGAAG | 1 cut(s) | 295 |
| EcoICRI | GAGCTC | 1 cut(s) | 28 |
| EcoRI | GAATTC | 1 cut(s) | 16 |
| EcoT38I | GRGCYC | 1 cut(s) | 30 |
| FaeI | CATG | 2 cut(s) | 287, 356 |
| FaiI | YATR | 9 cut(s) | 42, 44, 272, 274, 285, 290, 306, 354, 379 |
| FatI | CATG | 2 cut(s) | 283, 352 |
| FauNDI | CATATG | 1 cut(s) | 272 |
| FbaI | TGATCA | 1 cut(s) | 343 |
| Fnu4HI | GCNGC | 2 cut(s) | 155, 293 |
| FokI | GGATG | 1 cut(s) | 231 |
| FriOI | GRGCYC | 1 cut(s) | 30 |
| Fsp4HI | GCNGC | 2 cut(s) | 155, 293 |
| GluI | GCNGC | 2 cut(s) | 155, 293 |
| HaeIII | GGCC | 1 cut(s) | 300 |
| HapII | CCGG | 1 cut(s) | 254 |
| Hin1II | CATG | 2 cut(s) | 287, 356 |
| HincII | GTYRAC | 1 cut(s) | 72 |
| HindII | GTYRAC | 1 cut(s) | 72 |
| HinfI | GANTC | 1 cut(s) | 315 |
| HpaII | CCGG | 1 cut(s) | 254 |
| Hpy166II | GTNNAC | 1 cut(s) | 72 |
| Hpy188I | TCNGA | 2 cut(s) | 118, 314 |
| Hpy188III | TCNNGA | 1 cut(s) | 83 |
| Hpy8I | GTNNAC | 1 cut(s) | 72 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 3 cut(s) | 168, 292, 356 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 34, 228 |
| HpyF3I | CTNAG | 1 cut(s) | 29 |
| Hsp92II | CATG | 2 cut(s) | 287, 356 |
| Ksp22I | TGATCA | 1 cut(s) | 343 |
| Kzo9I | GATC | 2 cut(s) | 225, 343 |
| LmnI | GCTCC | 2 cut(s) | 25, 151 |
| LpnPI | CCDG | 5 cut(s) | 8, 66, 80, 200, 267 |
| Lsp1109I | GCAGC | 2 cut(s) | 166, 304 |
| LweI | GCATC | 1 cut(s) | 209 |
| MaeIII | GTNAC | 1 cut(s) | 316 |
| MalI | GATC | 2 cut(s) | 227, 345 |
| MboI | GATC | 2 cut(s) | 225, 343 |
| MboII | GAAGA | 5 cut(s) | 206, 209, 301, 314, 344 |
| MhlI | GDGCHC | 1 cut(s) | 30 |
| MluCI | AATT | 3 cut(s) | 16, 104, 186 |
| MlyI | GAGTC | 1 cut(s) | 324 |
| MnlI | CCTC | 1 cut(s) | 237 |
| MseI | TTAA | 2 cut(s) | 122, 362 |
| MspI | CCGG | 1 cut(s) | 254 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 34, 228 |
| NdeI | CATATG | 1 cut(s) | 272 |
| NdeII | GATC | 2 cut(s) | 225, 343 |
| NlaIII | CATG | 2 cut(s) | 287, 356 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| NspI | RCATGY | 1 cut(s) | 356 |
| PkrI | GCNGC | 2 cut(s) | 156, 294 |
| PleI | GAGTC | 1 cut(s) | 323 |
| PpsI | GAGTC | 1 cut(s) | 323 |
| Psp124BI | GAGCTC | 1 cut(s) | 30 |
| PstI | CTGCAG | 1 cut(s) | 170 |
| RsaI | GTAC | 2 cut(s) | 34, 209 |
| RsaNI | GTAC | 2 cut(s) | 33, 208 |
| SacI | GAGCTC | 1 cut(s) | 30 |
| SaqAI | TTAA | 2 cut(s) | 122, 362 |
| SatI | GCNGC | 2 cut(s) | 155, 293 |
| Sau3AI | GATC | 2 cut(s) | 225, 343 |
| SchI | GAGTC | 1 cut(s) | 324 |
| SduI | GDGCHC | 1 cut(s) | 30 |
| SetI | ASST | 5 cut(s) | 30, 55, 129, 159, 175 |
| SfaNI | GCATC | 1 cut(s) | 209 |
| SfcI | CTRYAG | 2 cut(s) | 57, 166 |
| Sse9I | AATT | 3 cut(s) | 16, 104, 186 |
| SstI | GAGCTC | 1 cut(s) | 30 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TasI | AATT | 3 cut(s) | 16, 104, 186 |
| Tru1I | TTAA | 2 cut(s) | 122, 362 |
| Tru9I | TTAA | 2 cut(s) | 122, 362 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| TseI | GCWGC | 2 cut(s) | 154, 292 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 16 |
| XceI | RCATGY | 1 cut(s) | 356 |