DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 453 |
| AclWI | GGATC | 3 cut(s) | 320, 437, 450 |
| AcsI | RAATTY | 1 cut(s) | 487 |
| AcuI | CTGAAG | 2 cut(s) | 177, 294 |
| AfaI | GTAC | 2 cut(s) | 21, 504 |
| AfeI | AGCGCT | 1 cut(s) | 409 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 453 |
| AgsI | TTSAA | 3 cut(s) | 166, 199, 255 |
| AluBI | AGCT | 3 cut(s) | 155, 272, 317 |
| AluI | AGCT | 3 cut(s) | 155, 272, 317 |
| AlwI | GGATC | 3 cut(s) | 320, 437, 450 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 230 |
| Aor51HI | AGCGCT | 1 cut(s) | 409 |
| ApeKI | GCWGC | 1 cut(s) | 287 |
| ApoI | RAATTY | 1 cut(s) | 487 |
| AseI | ATTAAT | 1 cut(s) | 45 |
| AspLEI | GCGC | 1 cut(s) | 410 |
| BamHI | GGATCC | 1 cut(s) | 442 |
| BbvI | GCAGC | 1 cut(s) | 274 |
| BccI | CCATC | 1 cut(s) | 311 |
| BfaI | CTAG | 1 cut(s) | 323 |
| BfoI | RGCGCY | 1 cut(s) | 411 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| BmiI | GGNNCC | 1 cut(s) | 444 |
| BmrI | ACTGGG | 1 cut(s) | 463 |
| BmuI | ACTGGG | 1 cut(s) | 463 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 453 |
| Bse1I | ACTGG | 1 cut(s) | 458 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 453 |
| BseNI | ACTGG | 1 cut(s) | 458 |
| BseXI | GCAGC | 1 cut(s) | 274 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 453 |
| Bsp1407I | TGTACA | 1 cut(s) | 19 |
| Bsp143I | GATC | 2 cut(s) | 325, 442 |
| BspHI | TCATGA | 1 cut(s) | 177 |
| BspLI | GGNNCC | 1 cut(s) | 444 |
| BspPI | GGATC | 3 cut(s) | 320, 437, 450 |
| BsrGI | TGTACA | 1 cut(s) | 19 |
| BsrI | ACTGG | 1 cut(s) | 458 |
| BssMI | GATC | 2 cut(s) | 325, 442 |
| Bst6I | CTCTTC | 2 cut(s) | 93, 256 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 128 |
| BstAUI | TGTACA | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 1 cut(s) | 412 |
| BstDEI | CTNAG | 1 cut(s) | 515 |
| BstH2I | RGCGCY | 1 cut(s) | 411 |
| BstHHI | GCGC | 1 cut(s) | 410 |
| BstKTI | GATC | 2 cut(s) | 328, 445 |
| BstMBI | GATC | 2 cut(s) | 325, 442 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 128, 269 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BstV1I | GCAGC | 1 cut(s) | 274 |
| BstX2I | RGATCY | 2 cut(s) | 325, 442 |
| BstYI | RGATCY | 2 cut(s) | 325, 442 |
| Cac8I | GCNNGC | 1 cut(s) | 412 |
| CaiI | CAGNNNCTG | 1 cut(s) | 230 |
| CciI | TCATGA | 1 cut(s) | 177 |
| CfoI | GCGC | 1 cut(s) | 410 |
| Csp6I | GTAC | 2 cut(s) | 20, 503 |
| CviAII | CATG | 3 cut(s) | 178, 260, 477 |
| CviJI | RGCY | 6 cut(s) | 155, 230, 272, 287, 317, 484 |
| CviKI_1 | RGCY | 6 cut(s) | 155, 230, 272, 287, 317, 484 |
| CviQI | GTAC | 2 cut(s) | 20, 503 |
| DdeI | CTNAG | 1 cut(s) | 515 |
| DpnI | GATC | 2 cut(s) | 327, 444 |
| DpnII | GATC | 2 cut(s) | 325, 442 |
| Eam1104I | CTCTTC | 2 cut(s) | 93, 256 |
| EarI | CTCTTC | 2 cut(s) | 93, 256 |
| Eco47III | AGCGCT | 1 cut(s) | 409 |
| Eco57I | CTGAAG | 2 cut(s) | 177, 294 |
| FaeI | CATG | 3 cut(s) | 181, 263, 480 |
| FaiI | YATR | 8 cut(s) | 11, 74, 118, 179, 261, 393, 405, 478 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 127, 159 |
| FatI | CATG | 3 cut(s) | 177, 259, 476 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| FspBI | CTAG | 1 cut(s) | 323 |
| GlaI | GCGC | 1 cut(s) | 409 |
| GluI | GCNGC | 1 cut(s) | 288 |
| HaeII | RGCGCY | 1 cut(s) | 411 |
| HhaI | GCGC | 1 cut(s) | 410 |
| Hin1II | CATG | 3 cut(s) | 181, 263, 480 |
| Hin6I | GCGC | 1 cut(s) | 408 |
| HinP1I | GCGC | 1 cut(s) | 408 |
| HincII | GTYRAC | 1 cut(s) | 512 |
| HindII | GTYRAC | 1 cut(s) | 512 |
| Hpy166II | GTNNAC | 1 cut(s) | 512 |
| Hpy188I | TCNGA | 3 cut(s) | 51, 84, 493 |
| Hpy188III | TCNNGA | 6 cut(s) | 29, 91, 178, 323, 329, 522 |
| Hpy8I | GTNNAC | 1 cut(s) | 512 |
| HpyCH4IV | ACGT | 1 cut(s) | 113 |
| HpyCH4V | TGCA | 4 cut(s) | 131, 222, 360, 436 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 128, 269 |
| HpyF3I | CTNAG | 1 cut(s) | 515 |
| HpySE526I | ACGT | 1 cut(s) | 113 |
| Hsp92II | CATG | 3 cut(s) | 181, 263, 480 |
| HspAI | GCGC | 1 cut(s) | 408 |
| Kzo9I | GATC | 2 cut(s) | 325, 442 |
| LpnPI | CCDG | 5 cut(s) | 14, 76, 269, 342, 439 |
| Lsp1109I | GCAGC | 1 cut(s) | 274 |
| MaeI | CTAG | 1 cut(s) | 323 |
| MaeII | ACGT | 1 cut(s) | 113 |
| MaeIII | GTNAC | 2 cut(s) | 109, 298 |
| MalI | GATC | 2 cut(s) | 327, 444 |
| MboI | GATC | 2 cut(s) | 325, 442 |
| MboII | GAAGA | 3 cut(s) | 110, 135, 243 |
| MfeI | CAATTG | 2 cut(s) | 217, 459 |
| MflI | RGATCY | 2 cut(s) | 325, 442 |
| MluCI | AATT | 6 cut(s) | 42, 217, 311, 418, 459, 487 |
| MmeI | TCCRAC | 1 cut(s) | 516 |
| MnlI | CCTC | 3 cut(s) | 220, 259, 301 |
| MseI | TTAA | 2 cut(s) | 45, 188 |
| MslI | CAYNNNNRTG | 2 cut(s) | 264, 355 |
| MspA1I | CMGCKG | 1 cut(s) | 155 |
| MunI | CAATTG | 2 cut(s) | 217, 459 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 128, 269 |
| NdeII | GATC | 2 cut(s) | 325, 442 |
| NlaIII | CATG | 3 cut(s) | 181, 263, 480 |
| NlaIV | GGNNCC | 1 cut(s) | 444 |
| NmuCI | GTSAC | 1 cut(s) | 298 |
| NspI | RCATGY | 1 cut(s) | 263 |
| PagI | TCATGA | 1 cut(s) | 177 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 453 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| PshBI | ATTAAT | 1 cut(s) | 45 |
| PspN4I | GGNNCC | 1 cut(s) | 444 |
| PstNI | CAGNNNCTG | 1 cut(s) | 230 |
| PsuI | RGATCY | 2 cut(s) | 325, 442 |
| PvuII | CAGCTG | 1 cut(s) | 155 |
| RsaI | GTAC | 2 cut(s) | 21, 504 |
| RsaNI | GTAC | 2 cut(s) | 20, 503 |
| RseI | CAYNNNNRTG | 2 cut(s) | 264, 355 |
| SaqAI | TTAA | 2 cut(s) | 45, 188 |
| SatI | GCNGC | 1 cut(s) | 288 |
| Sau3AI | GATC | 2 cut(s) | 325, 442 |
| SetI | ASST | 4 cut(s) | 116, 157, 274, 319 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 264, 355 |
| Sse9I | AATT | 6 cut(s) | 42, 217, 311, 418, 459, 487 |
| SspMI | CTAG | 1 cut(s) | 323 |
| TaiI | ACGT | 1 cut(s) | 116 |
| TaqI | TCGA | 2 cut(s) | 57, 306 |
| TasI | AATT | 6 cut(s) | 42, 217, 311, 418, 459, 487 |
| TatI | WGTACW | 1 cut(s) | 19 |
| Tru1I | TTAA | 2 cut(s) | 45, 188 |
| Tru9I | TTAA | 2 cut(s) | 45, 188 |
| TseFI | GTSAC | 1 cut(s) | 298 |
| TseI | GCWGC | 1 cut(s) | 287 |
| Tsp45I | GTSAC | 1 cut(s) | 298 |
| TspDTI | ATGAA | 1 cut(s) | 282 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 453 |
| VspI | ATTAAT | 1 cut(s) | 45 |
| XapI | RAATTY | 1 cut(s) | 487 |
| XbaI | TCTAGA | 1 cut(s) | 322 |
| XceI | RCATGY | 1 cut(s) | 263 |
| XspI | CTAG | 1 cut(s) | 323 |