DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 454 |
| AcuI | CTGAAG | 4 cut(s) | 9, 90, 245, 277 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AgsI | TTSAA | 7 cut(s) | 134, 261, 330, 445, 463, 585, 633 |
| AluBI | AGCT | 5 cut(s) | 155, 246, 512, 592, 627 |
| AluI | AGCT | 5 cut(s) | 155, 246, 512, 592, 627 |
| Alw21I | GWGCWC | 1 cut(s) | 629 |
| Alw26I | GTCTC | 1 cut(s) | 33 |
| AoxI | GGCC | 1 cut(s) | 454 |
| AseI | ATTAAT | 1 cut(s) | 344 |
| AsuHPI | GGTGA | 2 cut(s) | 166, 528 |
| BalI | TGGCCA | 1 cut(s) | 456 |
| BanII | GRGCYC | 1 cut(s) | 629 |
| Bbv12I | GWGCWC | 1 cut(s) | 629 |
| BbvCI | CCTCAGC | 1 cut(s) | 334 |
| BccI | CCATC | 3 cut(s) | 180, 541, 541 |
| BclI | TGATCA | 1 cut(s) | 171 |
| BcoDI | GTCTC | 1 cut(s) | 33 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BpmI | CTGGAG | 1 cut(s) | 414 |
| Bpu10I | CCTNAGC | 1 cut(s) | 334 |
| BseGI | GGATG | 2 cut(s) | 191, 525 |
| BseMII | CTCAG | 2 cut(s) | 348, 631 |
| BsgI | GTGCAG | 1 cut(s) | 264 |
| Bsh1285I | CGRYCG | 1 cut(s) | 490 |
| BshFI | GGCC | 1 cut(s) | 456 |
| BsiEI | CGRYCG | 1 cut(s) | 490 |
| BsiHKAI | GWGCWC | 1 cut(s) | 629 |
| BsmAI | GTCTC | 1 cut(s) | 33 |
| BsnI | GGCC | 1 cut(s) | 456 |
| Bsp1286I | GDGCHC | 1 cut(s) | 629 |
| Bsp143I | GATC | 2 cut(s) | 171, 396 |
| BspANI | GGCC | 1 cut(s) | 456 |
| BspCNI | CTCAG | 2 cut(s) | 347, 630 |
| BspQI | GCTCTTC | 1 cut(s) | 634 |
| BssMI | GATC | 2 cut(s) | 171, 396 |
| Bst4CI | ACNGT | 2 cut(s) | 96, 142 |
| Bst6I | CTCTTC | 1 cut(s) | 634 |
| BstC8I | GCNNGC | 2 cut(s) | 202, 248 |
| BstDEI | CTNAG | 2 cut(s) | 334, 617 |
| BstF5I | GGATG | 2 cut(s) | 191, 525 |
| BstKTI | GATC | 2 cut(s) | 174, 399 |
| BstMAI | GTCTC | 1 cut(s) | 33 |
| BstMBI | GATC | 2 cut(s) | 171, 396 |
| BstMCI | CGRYCG | 1 cut(s) | 490 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 210 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BsuRI | GGCC | 1 cut(s) | 456 |
| BtsCI | GGATG | 2 cut(s) | 191, 525 |
| BtsIMutI | CAGTG | 2 cut(s) | 33, 66 |
| Cac8I | GCNNGC | 2 cut(s) | 202, 248 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 3 cut(s) | 20, 208, 266 |
| CviJI | RGCY | 9 cut(s) | 155, 200, 246, 270, 338, 456, 512, 592, 627 |
| CviKI_1 | RGCY | 9 cut(s) | 155, 200, 246, 270, 338, 456, 512, 592, 627 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 2 cut(s) | 334, 617 |
| DpnI | GATC | 2 cut(s) | 173, 398 |
| DpnII | GATC | 2 cut(s) | 171, 396 |
| EaeI | YGGCCR | 1 cut(s) | 454 |
| Eam1104I | CTCTTC | 1 cut(s) | 634 |
| EarI | CTCTTC | 1 cut(s) | 634 |
| Ecl136II | GAGCTC | 1 cut(s) | 627 |
| Eco24I | GRGCYC | 1 cut(s) | 629 |
| Eco53kI | GAGCTC | 1 cut(s) | 627 |
| Eco57I | CTGAAG | 4 cut(s) | 9, 90, 245, 277 |
| EcoICRI | GAGCTC | 1 cut(s) | 627 |
| EcoT38I | GRGCYC | 1 cut(s) | 629 |
| FaeI | CATG | 3 cut(s) | 23, 211, 269 |
| FaiI | YATR | 9 cut(s) | 21, 45, 84, 102, 124, 209, 267, 341, 479 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 254, 286 |
| FatI | CATG | 3 cut(s) | 19, 207, 265 |
| FbaI | TGATCA | 1 cut(s) | 171 |
| FokI | GGATG | 2 cut(s) | 198, 512 |
| FriOI | GRGCYC | 1 cut(s) | 629 |
| GsuI | CTGGAG | 1 cut(s) | 414 |
| HaeIII | GGCC | 1 cut(s) | 456 |
| Hin1II | CATG | 3 cut(s) | 23, 211, 269 |
| HincII | GTYRAC | 1 cut(s) | 614 |
| HindII | GTYRAC | 1 cut(s) | 614 |
| HinfI | GANTC | 4 cut(s) | 119, 326, 375, 610 |
| HphI | GGTGA | 2 cut(s) | 166, 528 |
| Hpy166II | GTNNAC | 1 cut(s) | 614 |
| Hpy188I | TCNGA | 2 cut(s) | 296, 620 |
| Hpy188III | TCNNGA | 5 cut(s) | 274, 311, 431, 445, 521 |
| Hpy8I | GTNNAC | 1 cut(s) | 614 |
| HpyAV | CCTTC | 6 cut(s) | 25, 29, 65, 301, 398, 591 |
| HpyCH4III | ACNGT | 2 cut(s) | 96, 142 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 281, 307, 597 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 210 |
| HpyF3I | CTNAG | 2 cut(s) | 334, 617 |
| Hsp92II | CATG | 3 cut(s) | 23, 211, 269 |
| Ksp22I | TGATCA | 1 cut(s) | 171 |
| Kzo9I | GATC | 2 cut(s) | 171, 396 |
| LguI | GCTCTTC | 1 cut(s) | 634 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeIII | GTNAC | 4 cut(s) | 376, 407, 550, 559 |
| MalI | GATC | 2 cut(s) | 173, 398 |
| MboI | GATC | 2 cut(s) | 171, 396 |
| MboII | GAAGA | 5 cut(s) | 59, 326, 413, 433, 621 |
| MhlI | GDGCHC | 1 cut(s) | 629 |
| MlsI | TGGCCA | 1 cut(s) | 456 |
| MluCI | AATT | 5 cut(s) | 87, 129, 159, 458, 634 |
| MluNI | TGGCCA | 1 cut(s) | 456 |
| MlyI | GAGTC | 2 cut(s) | 384, 619 |
| MmeI | TCCRAC | 1 cut(s) | 553 |
| MnlI | CCTC | 3 cut(s) | 295, 343, 438 |
| Mox20I | TGGCCA | 1 cut(s) | 456 |
| MscI | TGGCCA | 1 cut(s) | 456 |
| MseI | TTAA | 2 cut(s) | 344, 482 |
| Msp20I | TGGCCA | 1 cut(s) | 456 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 210 |
| NdeII | GATC | 2 cut(s) | 171, 396 |
| NlaIII | CATG | 3 cut(s) | 23, 211, 269 |
| NmuCI | GTSAC | 2 cut(s) | 376, 559 |
| PciSI | GCTCTTC | 1 cut(s) | 634 |
| PfeI | GAWTC | 2 cut(s) | 119, 326 |
| PleI | GAGTC | 2 cut(s) | 383, 618 |
| PpsI | GAGTC | 2 cut(s) | 383, 618 |
| PshBI | ATTAAT | 1 cut(s) | 344 |
| Psp124BI | GAGCTC | 1 cut(s) | 629 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| SacI | GAGCTC | 1 cut(s) | 629 |
| SapI | GCTCTTC | 1 cut(s) | 634 |
| SaqAI | TTAA | 2 cut(s) | 344, 482 |
| Sau3AI | GATC | 2 cut(s) | 171, 396 |
| SchI | GAGTC | 2 cut(s) | 384, 619 |
| SduI | GDGCHC | 1 cut(s) | 629 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| Sse9I | AATT | 5 cut(s) | 87, 129, 159, 458, 634 |
| SstI | GAGCTC | 1 cut(s) | 629 |
| TaaI | ACNGT | 2 cut(s) | 96, 142 |
| TaqI | TCGA | 2 cut(s) | 312, 399 |
| TaqII | GACCGA | 1 cut(s) | 504 |
| TasI | AATT | 5 cut(s) | 87, 129, 159, 458, 634 |
| TfiI | GAWTC | 2 cut(s) | 119, 326 |
| Tru1I | TTAA | 2 cut(s) | 344, 482 |
| Tru9I | TTAA | 2 cut(s) | 344, 482 |
| TscAI | CASTG | 2 cut(s) | 33, 73 |
| TseFI | GTSAC | 2 cut(s) | 376, 559 |
| Tsp45I | GTSAC | 2 cut(s) | 376, 559 |
| TspDTI | ATGAA | 3 cut(s) | 8, 60, 99 |
| TspRI | CASTG | 2 cut(s) | 33, 73 |
| VspI | ATTAAT | 1 cut(s) | 344 |