DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 269 |
| AfaI | GTAC | 1 cut(s) | 237 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 223 |
| AgsI | TTSAA | 2 cut(s) | 248, 290 |
| AluBI | AGCT | 4 cut(s) | 172, 196, 242, 404 |
| AluI | AGCT | 4 cut(s) | 172, 196, 242, 404 |
| Alw26I | GTCTC | 1 cut(s) | 302 |
| AlwI | GGATC | 1 cut(s) | 269 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 278 |
| AoxI | GGCC | 1 cut(s) | 151 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 75, 107 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 108, 140 |
| BccI | CCATC | 1 cut(s) | 182 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 302 |
| BfaI | CTAG | 1 cut(s) | 354 |
| BpuEI | CTTGAG | 1 cut(s) | 158 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 223 |
| BseMII | CTCAG | 1 cut(s) | 297 |
| BseRI | GAGGAG | 1 cut(s) | 146 |
| BseYI | CCCAGC | 1 cut(s) | 256 |
| BshFI | GGCC | 1 cut(s) | 153 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 223 |
| BsmAI | GTCTC | 1 cut(s) | 302 |
| BsnI | GGCC | 1 cut(s) | 153 |
| Bsp143I | GATC | 3 cut(s) | 16, 101, 274 |
| BspANI | GGCC | 1 cut(s) | 153 |
| BspCNI | CTCAG | 1 cut(s) | 298 |
| BspPI | GGATC | 1 cut(s) | 269 |
| BssMI | GATC | 3 cut(s) | 16, 101, 274 |
| Bst4CI | ACNGT | 3 cut(s) | 34, 66, 421 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstKTI | GATC | 3 cut(s) | 19, 104, 277 |
| BstMAI | GTCTC | 1 cut(s) | 302 |
| BstMBI | GATC | 3 cut(s) | 16, 101, 274 |
| BstX2I | RGATCY | 1 cut(s) | 274 |
| BstYI | RGATCY | 1 cut(s) | 274 |
| BsuRI | GGCC | 1 cut(s) | 153 |
| CaiI | CAGNNNCTG | 1 cut(s) | 278 |
| Csp6I | GTAC | 1 cut(s) | 236 |
| CviJI | RGCY | 5 cut(s) | 153, 172, 196, 242, 404 |
| CviKI_1 | RGCY | 5 cut(s) | 153, 172, 196, 242, 404 |
| CviQI | GTAC | 1 cut(s) | 236 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DpnI | GATC | 3 cut(s) | 18, 103, 276 |
| DpnII | GATC | 3 cut(s) | 16, 101, 274 |
| Eco32I | GATATC | 1 cut(s) | 211 |
| EcoRV | GATATC | 1 cut(s) | 211 |
| FaiI | YATR | 6 cut(s) | 41, 106, 222, 224, 266, 332 |
| FauNDI | CATATG | 1 cut(s) | 222 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| FspBI | CTAG | 1 cut(s) | 354 |
| GsaI | CCCAGC | 1 cut(s) | 260 |
| HaeIII | GGCC | 1 cut(s) | 153 |
| HinfI | GANTC | 1 cut(s) | 227 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 1 cut(s) | 337 |
| Hpy188III | TCNNGA | 2 cut(s) | 175, 354 |
| HpyCH4III | ACNGT | 3 cut(s) | 34, 66, 421 |
| HpyCH4V | TGCA | 1 cut(s) | 81 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 3 cut(s) | 16, 101, 274 |
| LpnPI | CCDG | 6 cut(s) | 66, 141, 252, 270, 285, 291 |
| MaeI | CTAG | 1 cut(s) | 354 |
| MalI | GATC | 3 cut(s) | 18, 103, 276 |
| MboI | GATC | 3 cut(s) | 16, 101, 274 |
| MboII | GAAGA | 3 cut(s) | 197, 205, 389 |
| MflI | RGATCY | 1 cut(s) | 274 |
| MlyI | GAGTC | 1 cut(s) | 236 |
| MnlI | CCTC | 7 cut(s) | 19, 124, 143, 241, 314, 355, 367 |
| MseI | TTAA | 1 cut(s) | 424 |
| MspA1I | CMGCKG | 1 cut(s) | 404 |
| NdeI | CATATG | 1 cut(s) | 222 |
| NdeII | GATC | 3 cut(s) | 16, 101, 274 |
| PleI | GAGTC | 1 cut(s) | 235 |
| PpsI | GAGTC | 1 cut(s) | 235 |
| PspFI | CCCAGC | 1 cut(s) | 256 |
| PstNI | CAGNNNCTG | 1 cut(s) | 278 |
| PsuI | RGATCY | 1 cut(s) | 274 |
| PvuII | CAGCTG | 1 cut(s) | 404 |
| RsaI | GTAC | 1 cut(s) | 237 |
| RsaNI | GTAC | 1 cut(s) | 236 |
| SaqAI | TTAA | 1 cut(s) | 424 |
| Sau3AI | GATC | 3 cut(s) | 16, 101, 274 |
| SchI | GAGTC | 1 cut(s) | 236 |
| SetI | ASST | 4 cut(s) | 174, 198, 244, 406 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| SspMI | CTAG | 1 cut(s) | 354 |
| TaaI | ACNGT | 3 cut(s) | 34, 66, 421 |
| Tru1I | TTAA | 1 cut(s) | 424 |
| Tru9I | TTAA | 1 cut(s) | 424 |
| TspDTI | ATGAA | 2 cut(s) | 319, 396 |
| XbaI | TCTAGA | 1 cut(s) | 353 |
| XspI | CTAG | 1 cut(s) | 354 |