DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 211 |
| AccI | GTMKAC | 2 cut(s) | 120, 492 |
| AclWI | GGATC | 4 cut(s) | 244, 386, 399, 591 |
| AcuI | CTGAAG | 1 cut(s) | 260 |
| AfaI | GTAC | 2 cut(s) | 191, 269 |
| AflII | CTTAAG | 1 cut(s) | 668 |
| AgsI | TTSAA | 4 cut(s) | 196, 325, 382, 435 |
| AjnI | CCWGG | 1 cut(s) | 348 |
| AluBI | AGCT | 3 cut(s) | 143, 667, 725 |
| AluI | AGCT | 3 cut(s) | 143, 667, 725 |
| AlwI | GGATC | 4 cut(s) | 244, 386, 399, 591 |
| AoxI | GGCC | 1 cut(s) | 646 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 570, 602 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 142 |
| BamHI | GGATCC | 1 cut(s) | 391 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 603, 635 |
| BccI | CCATC | 4 cut(s) | 154, 217, 503, 625 |
| BciT130I | CCWGG | 1 cut(s) | 350 |
| BfaI | CTAG | 1 cut(s) | 111 |
| BfrI | CTTAAG | 1 cut(s) | 668 |
| BfuAI | ACCTGC | 1 cut(s) | 211 |
| BmcAI | AGTACT | 1 cut(s) | 191 |
| Bme1390I | CCNGG | 1 cut(s) | 350 |
| BmiI | GGNNCC | 2 cut(s) | 27, 393 |
| BmrFI | CCNGG | 1 cut(s) | 350 |
| BpuEI | CTTGAG | 1 cut(s) | 103 |
| Bse1I | ACTGG | 3 cut(s) | 152, 171, 294 |
| Bse3DI | GCAATG | 1 cut(s) | 433 |
| BseBI | CCWGG | 1 cut(s) | 350 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseMI | GCAATG | 1 cut(s) | 433 |
| BseNI | ACTGG | 3 cut(s) | 152, 171, 294 |
| BseRI | GAGGAG | 1 cut(s) | 641 |
| BshFI | GGCC | 1 cut(s) | 648 |
| BsnI | GGCC | 1 cut(s) | 648 |
| Bsp143I | GATC | 4 cut(s) | 48, 249, 391, 596 |
| BspANI | GGCC | 1 cut(s) | 648 |
| BspHI | TCATGA | 1 cut(s) | 16 |
| BspLI | GGNNCC | 2 cut(s) | 27, 393 |
| BspMI | ACCTGC | 1 cut(s) | 211 |
| BspPI | GGATC | 4 cut(s) | 244, 386, 399, 591 |
| BspTI | CTTAAG | 1 cut(s) | 668 |
| BsrDI | GCAATG | 1 cut(s) | 433 |
| BsrI | ACTGG | 3 cut(s) | 152, 171, 294 |
| BssMI | GATC | 4 cut(s) | 48, 249, 391, 596 |
| Bst2UI | CCWGG | 1 cut(s) | 350 |
| Bst4CI | ACNGT | 5 cut(s) | 370, 461, 529, 561, 742 |
| BstAFI | CTTAAG | 1 cut(s) | 668 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 4 cut(s) | 51, 252, 394, 599 |
| BstMBI | GATC | 4 cut(s) | 48, 249, 391, 596 |
| BstNI | CCWGG | 1 cut(s) | 350 |
| BstSCI | CCNGG | 1 cut(s) | 348 |
| BstX2I | RGATCY | 3 cut(s) | 249, 391, 596 |
| BstYI | RGATCY | 3 cut(s) | 249, 391, 596 |
| BsuRI | GGCC | 1 cut(s) | 648 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsI | GCAGTG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 3 cut(s) | 105, 159, 375 |
| BveI | ACCTGC | 1 cut(s) | 211 |
| CciI | TCATGA | 1 cut(s) | 16 |
| Csp6I | GTAC | 2 cut(s) | 190, 268 |
| CviAII | CATG | 3 cut(s) | 17, 124, 496 |
| CviJI | RGCY | 7 cut(s) | 143, 274, 331, 476, 648, 667, 725 |
| CviKI_1 | RGCY | 7 cut(s) | 143, 274, 331, 476, 648, 667, 725 |
| CviQI | GTAC | 2 cut(s) | 190, 268 |
| DpnI | GATC | 4 cut(s) | 50, 251, 393, 598 |
| DpnII | GATC | 4 cut(s) | 48, 249, 391, 596 |
| DraI | TTTAAA | 1 cut(s) | 177 |
| Eco57I | CTGAAG | 1 cut(s) | 260 |
| EcoRII | CCWGG | 1 cut(s) | 348 |
| FaeI | CATG | 3 cut(s) | 20, 127, 499 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 465, 497 |
| FatI | CATG | 3 cut(s) | 16, 123, 495 |
| FblI | GTMKAC | 2 cut(s) | 120, 492 |
| FokI | GGATG | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 111 |
| HaeIII | GGCC | 1 cut(s) | 648 |
| Hin1II | CATG | 3 cut(s) | 20, 127, 499 |
| HincII | GTYRAC | 1 cut(s) | 121 |
| HindII | GTYRAC | 1 cut(s) | 121 |
| HindIII | AAGCTT | 1 cut(s) | 141 |
| HinfI | GANTC | 2 cut(s) | 373, 489 |
| Hpy166II | GTNNAC | 2 cut(s) | 121, 493 |
| Hpy188I | TCNGA | 4 cut(s) | 40, 53, 340, 488 |
| Hpy188III | TCNNGA | 4 cut(s) | 17, 66, 441, 589 |
| Hpy8I | GTNNAC | 2 cut(s) | 121, 493 |
| Hpy99I | CGWCG | 1 cut(s) | 461 |
| HpyCH4III | ACNGT | 5 cut(s) | 370, 461, 529, 561, 742 |
| HpyCH4V | TGCA | 4 cut(s) | 304, 426, 449, 576 |
| Hsp92II | CATG | 3 cut(s) | 20, 127, 499 |
| Kzo9I | GATC | 4 cut(s) | 48, 249, 391, 596 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MaeIII | GTNAC | 1 cut(s) | 370 |
| MalI | GATC | 4 cut(s) | 50, 251, 393, 598 |
| MboI | GATC | 4 cut(s) | 48, 249, 391, 596 |
| MboII | GAAGA | 3 cut(s) | 353, 692, 713 |
| MflI | RGATCY | 3 cut(s) | 249, 391, 596 |
| MluCI | AATT | 4 cut(s) | 87, 132, 435, 571 |
| MlyI | GAGTC | 2 cut(s) | 367, 498 |
| MmeI | TCCRAC | 1 cut(s) | 338 |
| MnlI | CCTC | 6 cut(s) | 70, 487, 514, 619, 638, 691 |
| MroXI | GAANNNNTTC | 1 cut(s) | 142 |
| MseI | TTAA | 4 cut(s) | 167, 176, 669, 745 |
| MspA1I | CMGCKG | 1 cut(s) | 725 |
| MspCI | CTTAAG | 1 cut(s) | 668 |
| MspR9I | CCNGG | 1 cut(s) | 350 |
| MvaI | CCWGG | 1 cut(s) | 350 |
| NdeII | GATC | 4 cut(s) | 48, 249, 391, 596 |
| NlaIII | CATG | 3 cut(s) | 20, 127, 499 |
| NlaIV | GGNNCC | 2 cut(s) | 27, 393 |
| NmuCI | GTSAC | 1 cut(s) | 370 |
| PagI | TCATGA | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 142 |
| PfoI | TCCNGGA | 1 cut(s) | 348 |
| PleI | GAGTC | 2 cut(s) | 367, 497 |
| PpsI | GAGTC | 2 cut(s) | 367, 497 |
| Psp6I | CCWGG | 1 cut(s) | 348 |
| PspGI | CCWGG | 1 cut(s) | 348 |
| PspN4I | GGNNCC | 2 cut(s) | 27, 393 |
| PsuI | RGATCY | 3 cut(s) | 249, 391, 596 |
| PvuII | CAGCTG | 1 cut(s) | 725 |
| RsaI | GTAC | 2 cut(s) | 191, 269 |
| RsaNI | GTAC | 2 cut(s) | 190, 268 |
| SalI | GTCGAC | 1 cut(s) | 119 |
| SaqAI | TTAA | 4 cut(s) | 167, 176, 669, 745 |
| Sau3AI | GATC | 4 cut(s) | 48, 249, 391, 596 |
| ScaI | AGTACT | 1 cut(s) | 191 |
| SchI | GAGTC | 2 cut(s) | 367, 498 |
| ScrFI | CCNGG | 1 cut(s) | 350 |
| SetI | ASST | 6 cut(s) | 31, 145, 205, 230, 669, 727 |
| SmlI | CTYRAG | 2 cut(s) | 82, 668 |
| SmoI | CTYRAG | 2 cut(s) | 82, 668 |
| Sse9I | AATT | 4 cut(s) | 87, 132, 435, 571 |
| SspMI | CTAG | 1 cut(s) | 111 |
| StyD4I | CCNGG | 1 cut(s) | 348 |
| TaaI | ACNGT | 5 cut(s) | 370, 461, 529, 561, 742 |
| TaqI | TCGA | 3 cut(s) | 65, 120, 376 |
| TasI | AATT | 4 cut(s) | 87, 132, 435, 571 |
| TatI | WGTACW | 2 cut(s) | 189, 267 |
| Tru1I | TTAA | 4 cut(s) | 167, 176, 669, 745 |
| Tru9I | TTAA | 4 cut(s) | 167, 176, 669, 745 |
| TscAI | CASTG | 3 cut(s) | 112, 159, 375 |
| TseFI | GTSAC | 1 cut(s) | 370 |
| Tsp45I | GTSAC | 1 cut(s) | 370 |
| TspDTI | ATGAA | 5 cut(s) | 5, 33, 226, 377, 720 |
| TspGWI | ACGGA | 1 cut(s) | 692 |
| TspRI | CASTG | 3 cut(s) | 112, 159, 375 |
| Vha464I | CTTAAG | 1 cut(s) | 668 |
| XmiI | GTMKAC | 2 cut(s) | 120, 492 |
| XmnI | GAANNNNTTC | 1 cut(s) | 142 |
| XspI | CTAG | 1 cut(s) | 111 |
| ZrmI | AGTACT | 1 cut(s) | 191 |