Rroxscaffold_6G00407660

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000050
Physical Location & Seq
Forward (+)
30314212 .. 30329517
15306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00407660.1

Sequence Viewer

Length: 846 bp
ATGGAGATCGGAGCGACCACGGATCCAAAAACGGATCCTACCGGATTTCCCCGATTCCGACATGCTAATATTGAAGCTCCTGTTCCCGAGCACAACAATGAGGTGCCCGAAGCTACTTTGCAAATGTCAATGCAGATCCAGGCATCATCTATGAACATGCCAAACTTCAACAATGAGTTGCTCGTAGAACAAGTAACTCCATCGAGCACAAATCACAGCTGCATAATCATTGATCCGGACATTGACCAAAAAGAAGAGTACGAGGAAGAATTCTCAAAAGCGGGGGATAAGTCGAAATTGCTACCGACACCATTCAAGCAACCACTCCACCGGAAGCCGGATCATGCAACAAAAACGGTTTCACAGCTCAACACCGTTAATCCACATGAATACCGGCAAGAAGCGCTCATCGCAATGCATGGATTTGTAGATTTCCTACATACAACGGCTGGTGGTACAAAGAAGAGATCGGAGATCCGAGAAGGGAGTATTGAAGATTTGGTAGGAAAAAGGCCGAAGATTGAAGAGAAGAAGGTCAAGATTGAGGAGAATAAGGTTGAAGCCGAAATTGCTACCGACACCATTCAAGCAACCACTCCACCAGAAGCCGATCATGCAACAAAAACAGTTTCACAGCTCAACACCGTTAATCCACATGAATACCAGCAAGAAGCGCTCATCGCAATGCATGGATTTGTAGATTTCCTACATACAACGGCTGGTGGTACAAAGGTTGCCCGACCCGCCGCAAGGAACTCAAGCCAAAAGAGGATACTAATCGGCTTAGCCGTAATCGTCACGACATACAAACGCCTCTCCCATGCTACGAGTATACATGACGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

281

Amino Acids

31.28

Weight (kDa)

5.87

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 103
AccI GTMKAC 1 cut(s) 832
AccIII TCCGGA 1 cut(s) 235
AciI CCGC 3 cut(s) 281, 744, 747
AclWI GGATC 8 cut(s) 17, 29, 30, 42, 130, 227, 348, 469
AcsI RAATTY 1 cut(s) 269
AfaI GTAC 3 cut(s) 260, 457, 727
AfeI AGCGCT 2 cut(s) 405, 675
AfiI CCNNNNNNNGG 2 cut(s) 337, 750
AgsI TTSAA 7 cut(s) 74, 169, 316, 494, 524, 560, 587
AjnI CCWGG 1 cut(s) 138
AluBI AGCT 5 cut(s) 77, 113, 219, 367, 637
AluI AGCT 5 cut(s) 77, 113, 219, 367, 637
Alw21I GWGCWC 2 cut(s) 93, 209
AlwI GGATC 8 cut(s) 17, 29, 30, 42, 130, 227, 348, 469
Ama87I CYCGRG 1 cut(s) 86
Aor13HI TCCGGA 1 cut(s) 235
Aor51HI AGCGCT 2 cut(s) 405, 675
AoxI GGCC 1 cut(s) 512
ApeKI GCWGC 1 cut(s) 219
ApoI RAATTY 1 cut(s) 269
AspLEI GCGC 2 cut(s) 406, 676
AvaI CYCGRG 1 cut(s) 86
BaeGI GKGCMC 1 cut(s) 108
BaeI ACNNNNGTAYC 2 cut(s) 717, 750
BamHI GGATCC 2 cut(s) 22, 34
BanI GGYRCC 1 cut(s) 103
Bbv12I GWGCWC 2 cut(s) 93, 209
BbvI GCAGC 1 cut(s) 206
BccI CCATC 1 cut(s) 208
BceAI ACGGC 3 cut(s) 462, 732, 773
BciT130I CCWGG 1 cut(s) 140
BciVI GTATCC 1 cut(s) 765
BfoI RGCGCY 2 cut(s) 407, 677
BfuI GTATCC 1 cut(s) 765
BisI GCNGC 2 cut(s) 220, 747
BlpI GCTNAGC 1 cut(s) 784
BlsI GCNGC 2 cut(s) 221, 748
Bme1390I CCNGG 1 cut(s) 140
BmeT110I CYCGRG 1 cut(s) 86
BmiI GGNNCC 3 cut(s) 24, 36, 105
BmrFI CCNGG 1 cut(s) 140
BmsI GCATC 1 cut(s) 152
Bpu1102I GCTNAGC 1 cut(s) 784
BpuEI CTTGAG 1 cut(s) 742
BsaBI GATNNNNATC 1 cut(s) 776
BsaJI CCNNGG 1 cut(s) 18
BsaWI WCCGGW 3 cut(s) 41, 235, 330
Bsc4I CCNNNNNNNGG 2 cut(s) 337, 750
Bse118I RCCGGY 1 cut(s) 393
Bse3DI GCAATG 2 cut(s) 420, 690
Bse8I GATNNNNATC 1 cut(s) 776
BseAI TCCGGA 1 cut(s) 235
BseBI CCWGG 1 cut(s) 140
BseDI CCNNGG 1 cut(s) 18
BseJI GATNNNNATC 1 cut(s) 776
BseLI CCNNNNNNNGG 2 cut(s) 337, 750
BseMI GCAATG 2 cut(s) 420, 690
BseRI GAGGAG 1 cut(s) 560
BseSI GKGCMC 1 cut(s) 108
BseXI GCAGC 1 cut(s) 206
BshFI GGCC 1 cut(s) 514
BshNI GGYRCC 1 cut(s) 103
BsiHKAI GWGCWC 2 cut(s) 93, 209
BsiHKCI CYCGRG 1 cut(s) 86
BsiSI CCGG 5 cut(s) 42, 236, 331, 338, 394
BslI CCNNNNNNNGG 2 cut(s) 337, 750
BsnI GGCC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 86
Bsp1286I GDGCHC 3 cut(s) 93, 108, 209
Bsp13I TCCGGA 1 cut(s) 235
Bsp143I GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
Bsp1720I GCTNAGC 1 cut(s) 784
BspACI CCGC 3 cut(s) 281, 744, 747
BspANI GGCC 1 cut(s) 514
BspEI TCCGGA 1 cut(s) 235
BspLI GGNNCC 3 cut(s) 24, 36, 105
BspPI GGATC 8 cut(s) 17, 29, 30, 42, 130, 227, 348, 469
BspT107I GGYRCC 1 cut(s) 103
BsrDI GCAATG 2 cut(s) 420, 690
BsrFI RCCGGY 1 cut(s) 393
BssAI RCCGGY 1 cut(s) 393
BssECI CCNNGG 1 cut(s) 18
BssMI GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
BssNAI GTATAC 1 cut(s) 833
Bst1107I GTATAC 1 cut(s) 833
Bst2UI CCWGG 1 cut(s) 140
Bst4CI ACNGT 4 cut(s) 358, 376, 628, 646
Bst6I CTCTTC 3 cut(s) 249, 458, 519
BstDEI CTNAG 1 cut(s) 784
BstDSI CCRYGG 1 cut(s) 18
BstH2I RGCGCY 2 cut(s) 407, 677
BstHHI GCGC 2 cut(s) 406, 676
BstKTI GATC 9 cut(s) 9, 25, 37, 138, 235, 343, 470, 477, 613
BstMBI GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
BstMWI GCNNNNNNNGC 7 cut(s) 403, 410, 569, 614, 673, 680, 743
BstNI CCWGG 1 cut(s) 140
BstNSI RCATGY 2 cut(s) 65, 160
BstSCI CCNGG 1 cut(s) 138
BstSLI GKGCMC 1 cut(s) 108
BstV1I GCAGC 1 cut(s) 206
BstX2I RGATCY 4 cut(s) 22, 34, 135, 474
BstYI RGATCY 4 cut(s) 22, 34, 135, 474
BstZ17I GTATAC 1 cut(s) 833
BsuI GTATCC 1 cut(s) 765
BsuRI GGCC 1 cut(s) 514
BtgI CCRYGG 1 cut(s) 18
BtgZI GCGATG 2 cut(s) 394, 664
CfoI GCGC 2 cut(s) 406, 676
Cfr10I RCCGGY 1 cut(s) 393
Csp6I GTAC 3 cut(s) 259, 456, 726
CviQI GTAC 3 cut(s) 259, 456, 726
DdeI CTNAG 1 cut(s) 784
DpnI GATC 9 cut(s) 8, 24, 36, 137, 234, 342, 469, 476, 612
DpnII GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
Eam1104I CTCTTC 3 cut(s) 249, 458, 519
EarI CTCTTC 3 cut(s) 249, 458, 519
Eco47III AGCGCT 2 cut(s) 405, 675
Eco88I CYCGRG 1 cut(s) 86
EcoRI GAATTC 1 cut(s) 269
EcoRII CCWGG 1 cut(s) 138
EcoT22I ATGCAT 2 cut(s) 420, 690
FauI CCCGC 2 cut(s) 274, 751
FblI GTMKAC 1 cut(s) 832
Fnu4HI GCNGC 2 cut(s) 220, 747
Fsp4HI GCNGC 2 cut(s) 220, 747
GlaI GCGC 2 cut(s) 405, 675
GluI GCNGC 2 cut(s) 220, 747
HaeII RGCGCY 2 cut(s) 407, 677
HaeIII GGCC 1 cut(s) 514
HapII CCGG 5 cut(s) 42, 236, 331, 338, 394
HhaI GCGC 2 cut(s) 406, 676
Hin6I GCGC 2 cut(s) 404, 674
HinP1I GCGC 2 cut(s) 404, 674
HinfI GANTC 1 cut(s) 54
HpaII CCGG 5 cut(s) 42, 236, 331, 338, 394
Hpy166II GTNNAC 1 cut(s) 833
Hpy188I TCNGA 4 cut(s) 11, 59, 472, 479
Hpy188III TCNNGA 4 cut(s) 86, 236, 538, 799
Hpy8I GTNNAC 1 cut(s) 833
HpyAV CCTTC 2 cut(s) 476, 526
HpyCH4III ACNGT 4 cut(s) 358, 376, 628, 646
HpyCH4V TGCA 7 cut(s) 121, 133, 222, 347, 418, 617, 688
HpyF10VI GCNNNNNNNGC 7 cut(s) 403, 410, 569, 614, 673, 680, 743
HpyF3I CTNAG 1 cut(s) 784
HspAI GCGC 2 cut(s) 404, 674
Kpn2I TCCGGA 1 cut(s) 235
Kzo9I GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
LmnI GCTCC 2 cut(s) 11, 82
Lsp1109I GCAGC 1 cut(s) 206
LweI GCATC 1 cut(s) 152
MaeIII GTNAC 2 cut(s) 193, 796
MalI GATC 9 cut(s) 8, 24, 36, 137, 234, 342, 469, 476, 612
MboI GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
MboII GAAGA 7 cut(s) 266, 278, 475, 506, 529, 536, 541
MflI RGATCY 4 cut(s) 22, 34, 135, 474
MhlI GDGCHC 3 cut(s) 93, 108, 209
MluCI AATT 3 cut(s) 269, 296, 567
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 5 cut(s) 94, 256, 538, 762, 824
Mph1103I ATGCAT 2 cut(s) 420, 690
MroI TCCGGA 1 cut(s) 235
MseI TTAA 2 cut(s) 378, 648
MslI CAYNNNNRTG 3 cut(s) 96, 413, 683
MspA1I CMGCKG 1 cut(s) 219
MspI CCGG 5 cut(s) 42, 236, 331, 338, 394
MspR9I CCNGG 1 cut(s) 140
MvaI CCWGG 1 cut(s) 140
MwoI GCNNNNNNNGC 7 cut(s) 403, 410, 569, 614, 673, 680, 743
NdeII GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
NlaIV GGNNCC 3 cut(s) 24, 36, 105
NmuCI GTSAC 1 cut(s) 796
NsiI ATGCAT 2 cut(s) 420, 690
NspI RCATGY 2 cut(s) 65, 160
PcsI WCGNNNNNNNCGW 1 cut(s) 786
PfeI GAWTC 1 cut(s) 54
PkrI GCNGC 2 cut(s) 221, 748
Psp6I CCWGG 1 cut(s) 138
PspGI CCWGG 1 cut(s) 138
PspN4I GGNNCC 3 cut(s) 24, 36, 105
PsuI RGATCY 4 cut(s) 22, 34, 135, 474
PvuII CAGCTG 1 cut(s) 219
RsaI GTAC 3 cut(s) 260, 457, 727
RsaNI GTAC 3 cut(s) 259, 456, 726
RseI CAYNNNNRTG 3 cut(s) 96, 413, 683
SaqAI TTAA 2 cut(s) 378, 648
SatI GCNGC 2 cut(s) 220, 747
Sau3AI GATC 9 cut(s) 6, 22, 34, 135, 232, 340, 467, 474, 610
ScrFI CCNGG 1 cut(s) 140
SduI GDGCHC 3 cut(s) 93, 108, 209
SetI ASST 9 cut(s) 79, 105, 115, 221, 369, 537, 558, 639, 735
SfaNI GCATC 1 cut(s) 152
SmiMI CAYNNNNRTG 3 cut(s) 96, 413, 683
SmlI CTYRAG 1 cut(s) 757
SmoI CTYRAG 1 cut(s) 757
Sse9I AATT 3 cut(s) 269, 296, 567
SsiI CCGC 3 cut(s) 281, 744, 747
SspI AATATT 1 cut(s) 70
StyD4I CCNGG 1 cut(s) 138
TaaI ACNGT 4 cut(s) 358, 376, 628, 646
TaqI TCGA 2 cut(s) 203, 293
TasI AATT 3 cut(s) 269, 296, 567
TauI GCSGC 1 cut(s) 749
TfiI GAWTC 1 cut(s) 54
Tru1I TTAA 2 cut(s) 378, 648
Tru9I TTAA 2 cut(s) 378, 648
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 1 cut(s) 219
Tsp45I GTSAC 1 cut(s) 796
TspDTI ATGAA 3 cut(s) 167, 402, 672
TspGWI ACGGA 2 cut(s) 35, 47
XapI RAATTY 1 cut(s) 269
XceI RCATGY 2 cut(s) 65, 160
XmiI GTMKAC 1 cut(s) 832
Zsp2I ATGCAT 2 cut(s) 420, 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.