DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 90 |
| AccII | CGCG | 1 cut(s) | 253 |
| AclI | AACGTT | 1 cut(s) | 15 |
| AclWI | GGATC | 1 cut(s) | 653 |
| AcsI | RAATTY | 4 cut(s) | 326, 386, 695, 827 |
| AfaI | GTAC | 2 cut(s) | 426, 735 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 90 |
| AgsI | TTSAA | 8 cut(s) | 8, 20, 64, 182, 386, 391, 742, 766 |
| AjiI | CACGTC | 1 cut(s) | 707 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 496, 528 |
| AluBI | AGCT | 1 cut(s) | 692 |
| AluI | AGCT | 1 cut(s) | 692 |
| Alw21I | GWGCWC | 2 cut(s) | 406, 576 |
| Alw26I | GTCTC | 1 cut(s) | 697 |
| AlwI | GGATC | 1 cut(s) | 653 |
| AoxI | GGCC | 3 cut(s) | 54, 95, 127 |
| ApeKI | GCWGC | 3 cut(s) | 444, 524, 674 |
| ApoI | RAATTY | 4 cut(s) | 326, 386, 695, 827 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 15 |
| AspS9I | GGNCC | 1 cut(s) | 808 |
| AsuHPI | GGTGA | 1 cut(s) | 499 |
| AvaII | GGWCC | 1 cut(s) | 808 |
| BbsI | GAAGAC | 1 cut(s) | 52 |
| Bbv12I | GWGCWC | 2 cut(s) | 406, 576 |
| BbvI | GCAGC | 3 cut(s) | 431, 511, 686 |
| BccI | CCATC | 1 cut(s) | 119 |
| BceAI | ACGGC | 2 cut(s) | 41, 278 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 637, 671 |
| BciVI | GTATCC | 2 cut(s) | 91, 337 |
| BclI | TGATCA | 2 cut(s) | 289, 651 |
| BcoDI | GTCTC | 1 cut(s) | 697 |
| BfaI | CTAG | 1 cut(s) | 528 |
| BfuI | GTATCC | 2 cut(s) | 91, 337 |
| BisI | GCNGC | 3 cut(s) | 445, 525, 675 |
| BlsI | GCNGC | 3 cut(s) | 446, 526, 676 |
| BmcAI | AGTACT | 1 cut(s) | 426 |
| Bme18I | GGWCC | 1 cut(s) | 808 |
| BmgBI | CACGTC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 1 cut(s) | 808 |
| BmiI | GGNNCC | 1 cut(s) | 810 |
| BmsI | GCATC | 2 cut(s) | 151, 478 |
| BpiI | GAAGAC | 1 cut(s) | 52 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 547, 579 |
| BpmI | CTGGAG | 1 cut(s) | 632 |
| BpuEI | CTTGAG | 1 cut(s) | 402 |
| Bsa29I | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BsaAI | YACGTR | 1 cut(s) | 823 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 337, 367, 393, 423 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 90 |
| Bse1I | ACTGG | 2 cut(s) | 569, 810 |
| BseCI | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 90 |
| BseNI | ACTGG | 2 cut(s) | 569, 810 |
| BseRI | GAGGAG | 1 cut(s) | 167 |
| BseXI | GCAGC | 3 cut(s) | 431, 511, 686 |
| Bsh1236I | CGCG | 1 cut(s) | 253 |
| BshFI | GGCC | 3 cut(s) | 56, 97, 129 |
| BshVI | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BsiHKAI | GWGCWC | 2 cut(s) | 406, 576 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 90 |
| BsmAI | GTCTC | 1 cut(s) | 697 |
| BsmBI | CGTCTC | 1 cut(s) | 697 |
| BsnI | GGCC | 3 cut(s) | 56, 97, 129 |
| Bsp1286I | GDGCHC | 2 cut(s) | 406, 576 |
| Bsp143I | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| BspANI | GGCC | 3 cut(s) | 56, 97, 129 |
| BspDI | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BspFNI | CGCG | 1 cut(s) | 253 |
| BspLI | GGNNCC | 1 cut(s) | 810 |
| BspPI | GGATC | 1 cut(s) | 653 |
| BsrI | ACTGG | 2 cut(s) | 569, 810 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| Bst4CI | ACNGT | 1 cut(s) | 534 |
| Bst6I | CTCTTC | 1 cut(s) | 548 |
| BstBAI | YACGTR | 1 cut(s) | 823 |
| BstC8I | GCNNGC | 1 cut(s) | 576 |
| BstDSI | CCRYGG | 1 cut(s) | 260 |
| BstFNI | CGCG | 1 cut(s) | 253 |
| BstKTI | GATC | 5 cut(s) | 292, 654, 661, 789, 796 |
| BstMAI | GTCTC | 1 cut(s) | 697 |
| BstMBI | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| BstUI | CGCG | 1 cut(s) | 253 |
| BstV1I | GCAGC | 3 cut(s) | 431, 511, 686 |
| BstV2I | GAAGAC | 1 cut(s) | 52 |
| Bsu15I | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BsuI | GTATCC | 2 cut(s) | 91, 337 |
| BsuRI | GGCC | 3 cut(s) | 56, 97, 129 |
| BsuTUI | ATCGAT | 3 cut(s) | 455, 657, 785 |
| BtgI | CCRYGG | 1 cut(s) | 260 |
| BtrI | CACGTC | 1 cut(s) | 707 |
| BtsIMutI | CAGTG | 2 cut(s) | 576, 847 |
| Cac8I | GCNNGC | 1 cut(s) | 576 |
| Cfr13I | GGNCC | 1 cut(s) | 808 |
| ClaI | ATCGAT | 3 cut(s) | 455, 657, 785 |
| Csp6I | GTAC | 2 cut(s) | 425, 734 |
| CviAII | CATG | 4 cut(s) | 377, 521, 649, 833 |
| CviJI | RGCY | 6 cut(s) | 56, 97, 129, 265, 444, 692 |
| CviKI_1 | RGCY | 6 cut(s) | 56, 97, 129, 265, 444, 692 |
| CviQI | GTAC | 2 cut(s) | 425, 734 |
| DpnI | GATC | 5 cut(s) | 291, 653, 660, 788, 795 |
| DpnII | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| DraI | TTTAAA | 2 cut(s) | 109, 331 |
| Eam1104I | CTCTTC | 1 cut(s) | 548 |
| EarI | CTCTTC | 1 cut(s) | 548 |
| Eco47I | GGWCC | 1 cut(s) | 808 |
| EcoRI | GAATTC | 1 cut(s) | 386 |
| Esp3I | CGTCTC | 1 cut(s) | 697 |
| FaeI | CATG | 4 cut(s) | 380, 524, 652, 836 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 332, 364, 411, 443 |
| FatI | CATG | 4 cut(s) | 376, 520, 648, 832 |
| FbaI | TGATCA | 2 cut(s) | 289, 651 |
| Fnu4HI | GCNGC | 3 cut(s) | 445, 525, 675 |
| Fsp4HI | GCNGC | 3 cut(s) | 445, 525, 675 |
| FspBI | CTAG | 1 cut(s) | 528 |
| GluI | GCNGC | 3 cut(s) | 445, 525, 675 |
| GsuI | CTGGAG | 1 cut(s) | 632 |
| HaeIII | GGCC | 3 cut(s) | 56, 97, 129 |
| Hin1II | CATG | 4 cut(s) | 380, 524, 652, 836 |
| HinfI | GANTC | 6 cut(s) | 185, 317, 457, 504, 618, 815 |
| HphI | GGTGA | 1 cut(s) | 499 |
| Hpy166II | GTNNAC | 1 cut(s) | 412 |
| Hpy188I | TCNGA | 3 cut(s) | 190, 357, 798 |
| Hpy188III | TCNNGA | 8 cut(s) | 35, 84, 170, 383, 419, 611, 702, 721 |
| Hpy8I | GTNNAC | 1 cut(s) | 412 |
| HpyAV | CCTTC | 3 cut(s) | 140, 358, 478 |
| HpyCH4III | ACNGT | 1 cut(s) | 534 |
| HpyCH4IV | ACGT | 4 cut(s) | 15, 201, 706, 822 |
| HpyCH4V | TGCA | 5 cut(s) | 164, 207, 217, 447, 648 |
| HpySE526I | ACGT | 4 cut(s) | 15, 201, 706, 822 |
| Hsp92II | CATG | 4 cut(s) | 380, 524, 652, 836 |
| Ksp22I | TGATCA | 2 cut(s) | 289, 651 |
| Kzo9I | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| LmnI | GCTCC | 2 cut(s) | 401, 613 |
| Lsp1109I | GCAGC | 3 cut(s) | 431, 511, 686 |
| LweI | GCATC | 2 cut(s) | 151, 478 |
| MaeI | CTAG | 1 cut(s) | 528 |
| MaeII | ACGT | 4 cut(s) | 15, 201, 706, 822 |
| MaeIII | GTNAC | 1 cut(s) | 619 |
| MalI | GATC | 5 cut(s) | 291, 653, 660, 788, 795 |
| MboI | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| MboII | GAAGA | 6 cut(s) | 20, 52, 194, 565, 770, 778 |
| MhlI | GDGCHC | 2 cut(s) | 406, 576 |
| MlyI | GAGTC | 1 cut(s) | 627 |
| MnlI | CCTC | 6 cut(s) | 63, 87, 145, 148, 363, 487 |
| MroXI | GAANNNNTTC | 1 cut(s) | 15 |
| MseI | TTAA | 7 cut(s) | 108, 143, 330, 339, 477, 500, 593 |
| MvnI | CGCG | 1 cut(s) | 253 |
| NdeII | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| NlaIII | CATG | 4 cut(s) | 380, 524, 652, 836 |
| NlaIV | GGNNCC | 1 cut(s) | 810 |
| NmuCI | GTSAC | 1 cut(s) | 619 |
| PdmI | GAANNNNTTC | 1 cut(s) | 15 |
| PfeI | GAWTC | 5 cut(s) | 185, 317, 457, 504, 815 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 90 |
| PkrI | GCNGC | 3 cut(s) | 446, 526, 676 |
| PleI | GAGTC | 1 cut(s) | 626 |
| PpsI | GAGTC | 1 cut(s) | 626 |
| Ppu21I | YACGTR | 1 cut(s) | 823 |
| Psp1406I | AACGTT | 1 cut(s) | 15 |
| PspN4I | GGNNCC | 1 cut(s) | 810 |
| PspPI | GGNCC | 1 cut(s) | 808 |
| RsaI | GTAC | 2 cut(s) | 426, 735 |
| RsaNI | GTAC | 2 cut(s) | 425, 734 |
| SaqAI | TTAA | 7 cut(s) | 108, 143, 330, 339, 477, 500, 593 |
| SatI | GCNGC | 3 cut(s) | 445, 525, 675 |
| Sau3AI | GATC | 5 cut(s) | 289, 651, 658, 786, 793 |
| Sau96I | GGNCC | 1 cut(s) | 808 |
| ScaI | AGTACT | 1 cut(s) | 426 |
| SchI | GAGTC | 1 cut(s) | 627 |
| SduI | GDGCHC | 2 cut(s) | 406, 576 |
| SetI | ASST | 9 cut(s) | 18, 25, 204, 350, 512, 592, 694, 709, 825 |
| SfaNI | GCATC | 2 cut(s) | 151, 478 |
| SinI | GGWCC | 1 cut(s) | 808 |
| SmlI | CTYRAG | 1 cut(s) | 417 |
| SmoI | CTYRAG | 1 cut(s) | 417 |
| SspMI | CTAG | 1 cut(s) | 528 |
| TaaI | ACNGT | 1 cut(s) | 534 |
| TaiI | ACGT | 4 cut(s) | 18, 204, 709, 825 |
| TaqI | TCGA | 5 cut(s) | 272, 455, 657, 701, 785 |
| TatI | WGTACW | 1 cut(s) | 424 |
| TfiI | GAWTC | 5 cut(s) | 185, 317, 457, 504, 815 |
| Tru1I | TTAA | 7 cut(s) | 108, 143, 330, 339, 477, 500, 593 |
| Tru9I | TTAA | 7 cut(s) | 108, 143, 330, 339, 477, 500, 593 |
| TscAI | CASTG | 2 cut(s) | 576, 847 |
| TseFI | GTSAC | 1 cut(s) | 619 |
| TseI | GCWGC | 3 cut(s) | 444, 524, 674 |
| Tsp45I | GTSAC | 1 cut(s) | 619 |
| TspDTI | ATGAA | 4 cut(s) | 330, 365, 807, 821 |
| TspGWI | ACGGA | 2 cut(s) | 296, 504 |
| TspRI | CASTG | 2 cut(s) | 576, 847 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 1 cut(s) | 808 |
| XapI | RAATTY | 4 cut(s) | 326, 386, 695, 827 |
| XmnI | GAANNNNTTC | 1 cut(s) | 15 |
| XspI | CTAG | 1 cut(s) | 528 |
| ZrmI | AGTACT | 1 cut(s) | 426 |