pycom01g12270

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
13051543 .. 13055296
3754 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g12270.4

Sequence Viewer

Length: 1539 bp
ATGTTATCCCACTCATTTAATGCGGTTCACGGAACCATCAACGGTCGAGACATCCAATTTTTTTTGGACCATCTAAGTGTCGGCAATGCATATGAAATCAACAAATTTCGTGTCATTCACAACAAGAGATCGAGCAAGGTTGTCCCTCATGCAGCTATCATTGAATTGAATAGGAAAACCACAATCGTTCCTATTCACAAAACAAGTCAAGAACTCCCAATGCACTGGTTCAATTTAATTGAGCTTAATCAACTTCATCAAAGAATCGACAACGATGTTGAGCTTACAGATGTGTTTGGTTGCCTAACGGCTGTGCAGCCAACTGAAGAAATCACTATCCAGAACACAAGACTTGCAAAGAAGAGAAATCTAAACTTGCAAAACATTAGAGACGAAACAGTGAGAATAACCTTATCGGGAGAGACTGCAACAGGTTTTGAGACCAGTGGAATACAAGTACTTTTGCCACCCGTATTTTGTGCTTTCACAAGCCTGAAAGTAAAACAATACCAAGGAAAACCTGTTCTCGGAAGCACAGGATCAATCGTTTGTGTTTTCAATCCAGAGATTCCACAACTCTCTGAATACAAACACAAGTTTAAGCATAGCAGATCACCTCTTCAAATCCTGCCCACCTCAGCTGAGATGTATACGGGCCGTGCAGTCAGTGCTACTACTGAGTCAAAAACAATTGACAAATTGCTTTTACTTGATCCTGCCTTGCACAAGAATGCAAGTTTCGTATGCCAAGCAACTATTGTTGAATTCGATTTGACTAAAGGCTGGTGGTACAAATCATGCCCGTCTTGCCATAAAGTTGTCAAGAAAAACTCTGAATCGTTTGAGTGCAATGAACATGGGTTCATAAACAGATTACCCGAACCATGGTTCCAAATAGATCTTATTGTGGAAGATAGCACAAATCAGCACAACTTCCTCATGATAGGAAGACATGCCGAAAAAATACTTCGTGTTTCTTGCCACACTCTGGTGATAGAGGATGGACATGAGGATCCTTTCATACTTCCACCAGCTCTAAAAAATTTGGTCGGCACAACAAAACAATTTCAGCTCTCTTTTGGAAATCAAAACACTGACTTTGGAAAGACAGACTTCATAGTTCATGGACTACTCCAAGATCAACCGCTTTCGAGCCCAACAATTGCCTTGGTCACACCAAAAACACCTACTCCCTCCGTAGGAATACATATTATGACTCAAGCGACCCCCAGCCCAATGATGCCTTCTCACCGACCAAATCAACAACCCCAGTTAGTTGCACCCACAAAGACTTCAAAAAGAGCATTGTTTCCTAATGAACCGGACAAATCTAACAGCAAAAAACCTCGCGGCGACCAAACAGACACAACCAATTCTGCTATAATTGCTAAAGAATTCCACAATCTGGTTGTCCCCAAAATTGAACCAGCAGACAAAGTGCCGATAGCCGCACTCAGAGCAAAATCTCAAACCAAAAAAACCAAAGATAGTGCGGAAGATGTCCACTCTCAGAAAAAGTTAACACCACAATCTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

513

Amino Acids

57.3

Weight (kDa)

8.99

Isoelectric Point (pI)

51.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 988, 1405
AccI GTMKAC 1 cut(s) 650
AccII CGCG 1 cut(s) 1350
AciI CCGC 5 cut(s) 23, 1145, 1350, 1449, 1493
AclWI GGATC 4 cut(s) 547, 707, 1007, 1020
AcsI RAATTY 4 cut(s) 104, 764, 1042, 1394
AcuI CTGAAG 1 cut(s) 345
AfaI GTAC 2 cut(s) 459, 791
AfiI CCNNNNNNNGG 5 cut(s) 527, 885, 988, 1199, 1405
AgsI TTSAA 8 cut(s) 164, 169, 232, 559, 623, 764, 1296, 1424
AjuI GAANNNNNNNTTGG 2 cut(s) 1228, 1260
AleI CACNNNNGTG 1 cut(s) 989
AloI GAACNNNNNNTCC 4 cut(s) 507, 539, 873, 905
AluBI AGCT 6 cut(s) 155, 244, 283, 641, 1034, 1072
AluI AGCT 6 cut(s) 155, 244, 283, 641, 1034, 1072
Alw26I GTCTC 4 cut(s) 42, 384, 416, 434
AlwI GGATC 4 cut(s) 547, 707, 1007, 1020
AoxI GGCC 1 cut(s) 655
ApeKI GCWGC 2 cut(s) 152, 316
ApoI RAATTY 4 cut(s) 104, 764, 1042, 1394
ArsI GACNNNNNNTTYG 2 cut(s) 96, 128
AspS9I GGNCC 2 cut(s) 67, 655
AsuHPI GGTGA 3 cut(s) 606, 1003, 1241
AvaII GGWCC 1 cut(s) 67
BamHI GGATCC 1 cut(s) 1012
BanII GRGCYC 1 cut(s) 1157
BbsI GAAGAC 1 cut(s) 955
BbvCI CCTCAGC 1 cut(s) 637
BbvI GCAGC 2 cut(s) 164, 328
BccI CCATC 3 cut(s) 44, 78, 995
BceAI ACGGC 2 cut(s) 324, 642
BcoDI GTCTC 4 cut(s) 42, 384, 416, 434
BglII AGATCT 1 cut(s) 898
BisI GCNGC 4 cut(s) 153, 317, 1351, 1449
BlsI GCNGC 4 cut(s) 154, 318, 1352, 1450
BmcAI AGTACT 1 cut(s) 459
Bme18I GGWCC 1 cut(s) 67
BmgT120I GGNCC 2 cut(s) 67, 655
BmiI GGNNCC 3 cut(s) 34, 890, 1014
BmrI ACTGGG 1 cut(s) 1264
BmsI GCATC 1 cut(s) 1230
BmuI ACTGGG 1 cut(s) 1264
BpiI GAAGAC 1 cut(s) 955
Bpu10I CCTNAGC 1 cut(s) 637
BpuEI CTTGAG 1 cut(s) 1203
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 3 cut(s) 511, 884, 1167
BsaWI WCCGGW 1 cut(s) 1321
BsaXI ACNNNNNCTCC 2 cut(s) 1174, 1204
Bsc4I CCNNNNNNNGG 5 cut(s) 527, 885, 988, 1199, 1405
Bse1I ACTGG 3 cut(s) 230, 444, 1270
Bse3DI GCAATG 2 cut(s) 91, 856
BseDI CCNNGG 3 cut(s) 511, 884, 1167
BseGI GGATG 2 cut(s) 51, 1006
BseLI CCNNNNNNNGG 5 cut(s) 527, 885, 988, 1199, 1405
BseMI GCAATG 2 cut(s) 91, 856
BseMII CTCAG 5 cut(s) 633, 651, 669, 1468, 1523
BseNI ACTGG 3 cut(s) 230, 444, 1270
BseXI GCAGC 2 cut(s) 164, 328
BseYI CCCAGC 1 cut(s) 1229
BsgI GTGCAG 2 cut(s) 335, 681
Bsh1236I CGCG 1 cut(s) 1350
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 1 cut(s) 657
BsiEI CGRYCG 1 cut(s) 46
BsiSI CCGG 1 cut(s) 1322
BslFI GGGAC 2 cut(s) 128, 1397
BslI CCNNNNNNNGG 5 cut(s) 527, 885, 988, 1199, 1405
BsmAI GTCTC 4 cut(s) 42, 384, 416, 434
BsmBI CGTCTC 1 cut(s) 384
BsmFI GGGAC 2 cut(s) 128, 1397
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 1 cut(s) 657
Bso31I GGTCTC 1 cut(s) 434
Bsp1286I GDGCHC 1 cut(s) 1157
Bsp143I GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
Bsp19I CCATGG 1 cut(s) 884
BspACI CCGC 5 cut(s) 23, 1145, 1350, 1449, 1493
BspANI GGCC 1 cut(s) 657
BspCNI CTCAG 5 cut(s) 634, 650, 670, 1467, 1522
BspFNI CGCG 1 cut(s) 1350
BspHI TCATGA 1 cut(s) 939
BspLI GGNNCC 3 cut(s) 34, 890, 1014
BspPI GGATC 4 cut(s) 547, 707, 1007, 1020
BspTNI GGTCTC 1 cut(s) 434
BsrDI GCAATG 2 cut(s) 91, 856
BsrI ACTGG 3 cut(s) 230, 444, 1270
BssECI CCNNGG 3 cut(s) 511, 884, 1167
BssMI GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
BssNAI GTATAC 1 cut(s) 651
BssT1I CCWWGG 3 cut(s) 511, 884, 1167
Bst1107I GTATAC 1 cut(s) 651
Bst4CI ACNGT 2 cut(s) 44, 400
Bst6I CTCTTC 2 cut(s) 356, 624
BstAPI GCANNNNNTGC 1 cut(s) 668
BstDEI CTNAG 6 cut(s) 74, 637, 642, 678, 1454, 1509
BstDSI CCRYGG 1 cut(s) 884
BstF5I GGATG 2 cut(s) 51, 1006
BstFNI CGCG 1 cut(s) 1350
BstKTI GATC 7 cut(s) 131, 542, 614, 715, 901, 1015, 1141
BstMAI GTCTC 4 cut(s) 42, 384, 416, 434
BstMBI GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
BstMCI CGRYCG 1 cut(s) 46
BstMWI GCNNNNNNNGC 4 cut(s) 668, 807, 1385, 1457
BstNSI RCATGY 1 cut(s) 956
BstUI CGCG 1 cut(s) 1350
BstV1I GCAGC 2 cut(s) 164, 328
BstV2I GAAGAC 1 cut(s) 955
BstX2I RGATCY 2 cut(s) 898, 1012
BstXI CCANNNNNNTGG 1 cut(s) 225
BstYI RGATCY 2 cut(s) 898, 1012
BstZ17I GTATAC 1 cut(s) 651
BsuRI GGCC 1 cut(s) 657
BtgI CCRYGG 1 cut(s) 884
BtsCI GGATG 2 cut(s) 51, 1006
BtsIMutI CAGTG 5 cut(s) 223, 405, 451, 673, 1092
CciI TCATGA 1 cut(s) 939
Cfr13I GGNCC 2 cut(s) 67, 655
Csp6I GTAC 2 cut(s) 458, 790
CviAII CATG 8 cut(s) 149, 798, 857, 885, 940, 953, 1007, 1124
CviQI GTAC 2 cut(s) 458, 790
DdeI CTNAG 6 cut(s) 74, 637, 642, 678, 1454, 1509
DpnI GATC 7 cut(s) 130, 541, 613, 714, 900, 1014, 1140
DpnII GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
Eam1104I CTCTTC 2 cut(s) 356, 624
EarI CTCTTC 2 cut(s) 356, 624
Eco130I CCWWGG 3 cut(s) 511, 884, 1167
Eco24I GRGCYC 1 cut(s) 1157
Eco31I GGTCTC 1 cut(s) 434
Eco47I GGWCC 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 345
EcoRI GAATTC 2 cut(s) 764, 1394
EcoT14I CCWWGG 3 cut(s) 511, 884, 1167
EcoT22I ATGCAT 1 cut(s) 91
EcoT38I GRGCYC 1 cut(s) 1157
ErhI CCWWGG 3 cut(s) 511, 884, 1167
Esp3I CGTCTC 1 cut(s) 384
FaeI CATG 8 cut(s) 152, 801, 860, 888, 943, 956, 1010, 1127
FalI AAGNNNNNCTT 2 cut(s) 1097, 1129
FaqI GGGAC 2 cut(s) 128, 1397
FatI CATG 8 cut(s) 148, 797, 856, 884, 939, 952, 1006, 1123
FauNDI CATATG 1 cut(s) 91
FblI GTMKAC 1 cut(s) 650
Fnu4HI GCNGC 4 cut(s) 153, 317, 1351, 1449
FokI GGATG 2 cut(s) 38, 1013
FriOI GRGCYC 1 cut(s) 1157
Fsp4HI GCNGC 4 cut(s) 153, 317, 1351, 1449
GluI GCNGC 4 cut(s) 153, 317, 1351, 1449
GsaI CCCAGC 1 cut(s) 1233
HaeIII GGCC 1 cut(s) 657
HapII CCGG 1 cut(s) 1322
Hin1II CATG 8 cut(s) 152, 801, 860, 888, 943, 956, 1010, 1127
HincII GTYRAC 1 cut(s) 1521
HindII GTYRAC 1 cut(s) 1521
HinfI GANTC 5 cut(s) 264, 568, 680, 836, 1216
HpaI GTTAAC 1 cut(s) 1521
HpaII CCGG 1 cut(s) 1322
HphI GGTGA 3 cut(s) 606, 1003, 1241
Hpy166II GTNNAC 4 cut(s) 28, 651, 1504, 1521
Hpy188I TCNGA 5 cut(s) 530, 583, 835, 1457, 1512
Hpy188III TCNNGA 7 cut(s) 47, 209, 340, 417, 563, 823, 940
Hpy8I GTNNAC 4 cut(s) 28, 651, 1504, 1521
HpyAV CCTTC 1 cut(s) 1254
HpyCH4III ACNGT 2 cut(s) 44, 400
HpyF10VI GCNNNNNNNGC 4 cut(s) 668, 807, 1385, 1457
HpyF3I CTNAG 6 cut(s) 74, 637, 642, 678, 1454, 1509
Hsp92II CATG 8 cut(s) 152, 801, 860, 888, 943, 956, 1010, 1127
KspAI GTTAAC 1 cut(s) 1521
Kzo9I GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
Lsp1109I GCAGC 2 cut(s) 164, 328
LweI GCATC 1 cut(s) 1230
MaeIII GTNAC 1 cut(s) 1171
MalI GATC 7 cut(s) 130, 541, 613, 714, 900, 1014, 1140
MboI GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
MboII GAAGA 6 cut(s) 338, 373, 611, 923, 960, 1508
MfeI CAATTG 2 cut(s) 690, 1161
MflI RGATCY 2 cut(s) 898, 1012
MhlI GDGCHC 1 cut(s) 1157
MlyI GAGTC 2 cut(s) 689, 1210
MnlI CCTC 8 cut(s) 156, 627, 646, 947, 991, 1003, 1204, 1356
Mph1103I ATGCAT 1 cut(s) 91
MseI TTAA 5 cut(s) 18, 236, 246, 600, 1520
MslI CAYNNNNRTG 3 cut(s) 75, 729, 989
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 1 cut(s) 1322
MunI CAATTG 2 cut(s) 690, 1161
Mva1269I GAATGC 1 cut(s) 736
MvnI CGCG 1 cut(s) 1350
MwoI GCNNNNNNNGC 4 cut(s) 668, 807, 1385, 1457
NcoI CCATGG 1 cut(s) 884
NdeI CATATG 1 cut(s) 91
NdeII GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
NlaIII CATG 8 cut(s) 152, 801, 860, 888, 943, 956, 1010, 1127
NlaIV GGNNCC 3 cut(s) 34, 890, 1014
NmuCI GTSAC 1 cut(s) 1171
NsiI ATGCAT 1 cut(s) 91
NspI RCATGY 1 cut(s) 956
OliI CACNNNNGTG 1 cut(s) 989
PagI TCATGA 1 cut(s) 939
PctI GAATGC 1 cut(s) 736
PfeI GAWTC 3 cut(s) 264, 568, 836
PflMI CCANNNNNTGG 2 cut(s) 988, 1405
PkrI GCNGC 4 cut(s) 154, 318, 1352, 1450
PleI GAGTC 2 cut(s) 688, 1210
PpsI GAGTC 2 cut(s) 688, 1210
PspFI CCCAGC 1 cut(s) 1229
PspN4I GGNNCC 3 cut(s) 34, 890, 1014
PspPI GGNCC 2 cut(s) 67, 655
PsuI RGATCY 2 cut(s) 898, 1012
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 2 cut(s) 459, 791
RsaNI GTAC 2 cut(s) 458, 790
RseI CAYNNNNRTG 3 cut(s) 75, 729, 989
SaqAI TTAA 5 cut(s) 18, 236, 246, 600, 1520
SatI GCNGC 4 cut(s) 153, 317, 1351, 1449
Sau3AI GATC 7 cut(s) 128, 539, 611, 712, 898, 1012, 1138
Sau96I GGNCC 2 cut(s) 67, 655
ScaI AGTACT 1 cut(s) 459
SchI GAGTC 2 cut(s) 689, 1210
SduI GDGCHC 1 cut(s) 1157
SfaNI GCATC 1 cut(s) 1230
SinI GGWCC 1 cut(s) 67
SmiMI CAYNNNNRTG 3 cut(s) 75, 729, 989
SmlI CTYRAG 1 cut(s) 1218
SmoI CTYRAG 1 cut(s) 1218
SsiI CCGC 5 cut(s) 23, 1145, 1350, 1449, 1493
StyI CCWWGG 3 cut(s) 511, 884, 1167
TaaI ACNGT 2 cut(s) 44, 400
TaqI TCGA 5 cut(s) 46, 131, 267, 768, 1151
TatI WGTACW 1 cut(s) 457
TauI GCSGC 2 cut(s) 1353, 1451
TfiI GAWTC 3 cut(s) 264, 568, 836
Tru1I TTAA 5 cut(s) 18, 236, 246, 600, 1520
Tru9I TTAA 5 cut(s) 18, 236, 246, 600, 1520
TscAI CASTG 5 cut(s) 230, 405, 451, 673, 1099
TseFI GTSAC 1 cut(s) 1171
TseI GCWGC 2 cut(s) 152, 316
Tsp45I GTSAC 1 cut(s) 1171
TspDTI ATGAA 8 cut(s) 108, 245, 853, 867, 1009, 1105, 1112, 1332
TspGWI ACGGA 3 cut(s) 45, 1186, 1524
TspRI CASTG 5 cut(s) 230, 405, 451, 673, 1099
Van91I CCANNNNNTGG 2 cut(s) 988, 1405
VpaK11BI GGWCC 1 cut(s) 67
XapI RAATTY 4 cut(s) 104, 764, 1042, 1394
XceI RCATGY 1 cut(s) 956
XmiI GTMKAC 1 cut(s) 650
ZrmI AGTACT 1 cut(s) 459
Zsp2I ATGCAT 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.