DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 279 |
| AciI | CCGC | 1 cut(s) | 242 |
| AcoI | YGGCCR | 1 cut(s) | 331 |
| AcsI | RAATTY | 2 cut(s) | 136, 441 |
| AfaI | GTAC | 1 cut(s) | 145 |
| AgsI | TTSAA | 1 cut(s) | 110 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw26I | GTCTC | 1 cut(s) | 179 |
| AoxI | GGCC | 1 cut(s) | 331 |
| ApoI | RAATTY | 2 cut(s) | 136, 441 |
| AsuII | TTCGAA | 1 cut(s) | 206 |
| BalI | TGGCCA | 1 cut(s) | 333 |
| BanII | GRGCYC | 1 cut(s) | 163 |
| BbsI | GAAGAC | 1 cut(s) | 215 |
| BcoDI | GTCTC | 1 cut(s) | 179 |
| BfmI | CTRYAG | 1 cut(s) | 354 |
| BmsI | GCATC | 1 cut(s) | 74 |
| BpiI | GAAGAC | 1 cut(s) | 215 |
| Bpu14I | TTCGAA | 1 cut(s) | 206 |
| BsaI | GGTCTC | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseMII | CTCAG | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 333 |
| BsmAI | GTCTC | 1 cut(s) | 179 |
| BsnI | GGCC | 1 cut(s) | 333 |
| Bso31I | GGTCTC | 1 cut(s) | 179 |
| Bsp119I | TTCGAA | 1 cut(s) | 206 |
| Bsp1286I | GDGCHC | 1 cut(s) | 163 |
| Bsp143I | GATC | 2 cut(s) | 129, 369 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 1 cut(s) | 333 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspHI | TCATGA | 1 cut(s) | 132 |
| BspT104I | TTCGAA | 1 cut(s) | 206 |
| BspTNI | GGTCTC | 1 cut(s) | 179 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 2 cut(s) | 129, 369 |
| Bst4CI | ACNGT | 2 cut(s) | 29, 214 |
| BstBI | TTCGAA | 1 cut(s) | 206 |
| BstC8I | GCNNGC | 2 cut(s) | 23, 115 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 2 cut(s) | 132, 372 |
| BstMAI | GTCTC | 1 cut(s) | 179 |
| BstMBI | GATC | 2 cut(s) | 129, 369 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 62 |
| BstSFI | CTRYAG | 1 cut(s) | 354 |
| BstV2I | GAAGAC | 1 cut(s) | 215 |
| BsuRI | GGCC | 1 cut(s) | 333 |
| BtsIMutI | CAGTG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 2 cut(s) | 23, 115 |
| CciI | TCATGA | 1 cut(s) | 132 |
| Csp6I | GTAC | 1 cut(s) | 144 |
| CviAII | CATG | 2 cut(s) | 133, 182 |
| CviJI | RGCY | 5 cut(s) | 21, 56, 161, 333, 352 |
| CviKI_1 | RGCY | 5 cut(s) | 21, 56, 161, 333, 352 |
| CviQI | GTAC | 1 cut(s) | 144 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 131, 371 |
| DpnII | GATC | 2 cut(s) | 129, 369 |
| EaeI | YGGCCR | 1 cut(s) | 331 |
| EciI | GGCGGA | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 1 cut(s) | 163 |
| Eco31I | GGTCTC | 1 cut(s) | 179 |
| Eco32I | GATATC | 1 cut(s) | 313 |
| EcoRV | GATATC | 1 cut(s) | 313 |
| EcoT38I | GRGCYC | 1 cut(s) | 163 |
| FaeI | CATG | 2 cut(s) | 136, 185 |
| FatI | CATG | 2 cut(s) | 132, 181 |
| FriOI | GRGCYC | 1 cut(s) | 163 |
| HaeIII | GGCC | 1 cut(s) | 333 |
| Hin1II | CATG | 2 cut(s) | 136, 185 |
| Hpy188I | TCNGA | 1 cut(s) | 378 |
| Hpy188III | TCNNGA | 2 cut(s) | 133, 316 |
| HpyCH4III | ACNGT | 2 cut(s) | 29, 214 |
| HpyCH4V | TGCA | 3 cut(s) | 25, 155, 271 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 62 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92II | CATG | 2 cut(s) | 136, 185 |
| Kzo9I | GATC | 2 cut(s) | 129, 369 |
| LpnPI | CCDG | 6 cut(s) | 3, 99, 257, 362, 366, 403 |
| LweI | GCATC | 1 cut(s) | 74 |
| MalI | GATC | 2 cut(s) | 131, 371 |
| MboI | GATC | 2 cut(s) | 129, 369 |
| MboII | GAAGA | 2 cut(s) | 60, 220 |
| MhlI | GDGCHC | 1 cut(s) | 163 |
| MlsI | TGGCCA | 1 cut(s) | 333 |
| MluCI | AATT | 4 cut(s) | 136, 284, 381, 441 |
| MluNI | TGGCCA | 1 cut(s) | 333 |
| MnlI | CCTC | 3 cut(s) | 303, 347, 379 |
| Mox20I | TGGCCA | 1 cut(s) | 333 |
| MscI | TGGCCA | 1 cut(s) | 333 |
| MseI | TTAA | 3 cut(s) | 219, 299, 445 |
| Msp20I | TGGCCA | 1 cut(s) | 333 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 62 |
| NdeII | GATC | 2 cut(s) | 129, 369 |
| NlaIII | CATG | 2 cut(s) | 136, 185 |
| NspV | TTCGAA | 1 cut(s) | 206 |
| PagI | TCATGA | 1 cut(s) | 132 |
| PsiI | TTATAA | 1 cut(s) | 279 |
| RsaI | GTAC | 1 cut(s) | 145 |
| RsaNI | GTAC | 1 cut(s) | 144 |
| SaqAI | TTAA | 3 cut(s) | 219, 299, 445 |
| Sau3AI | GATC | 2 cut(s) | 129, 369 |
| SduI | GDGCHC | 1 cut(s) | 163 |
| SetI | ASST | 3 cut(s) | 58, 339, 422 |
| SfaNI | GCATC | 1 cut(s) | 74 |
| SfcI | CTRYAG | 1 cut(s) | 354 |
| SfuI | TTCGAA | 1 cut(s) | 206 |
| Sse9I | AATT | 4 cut(s) | 136, 284, 381, 441 |
| SsiI | CCGC | 1 cut(s) | 242 |
| TaaI | ACNGT | 2 cut(s) | 29, 214 |
| TaqI | TCGA | 2 cut(s) | 60, 206 |
| TasI | AATT | 4 cut(s) | 136, 284, 381, 441 |
| Tru1I | TTAA | 3 cut(s) | 219, 299, 445 |
| Tru9I | TTAA | 3 cut(s) | 219, 299, 445 |
| TscAI | CASTG | 1 cut(s) | 32 |
| TspDTI | ATGAA | 4 cut(s) | 57, 102, 149, 190 |
| TspGWI | ACGGA | 1 cut(s) | 131 |
| TspRI | CASTG | 1 cut(s) | 32 |
| XapI | RAATTY | 2 cut(s) | 136, 441 |