DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 6 - 106 | 5.4e-08 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 355 |
| AcsI | RAATTY | 2 cut(s) | 206, 408 |
| AcyI | GRCGYC | 1 cut(s) | 97 |
| AfaI | GTAC | 5 cut(s) | 12, 129, 263, 273, 285 |
| AgsI | TTSAA | 6 cut(s) | 112, 158, 298, 316, 407, 533 |
| AjnI | CCWGG | 1 cut(s) | 539 |
| AleI | CACNNNNGTG | 1 cut(s) | 464 |
| AluBI | AGCT | 1 cut(s) | 194 |
| AluI | AGCT | 1 cut(s) | 194 |
| Alw21I | GWGCWC | 1 cut(s) | 354 |
| Alw26I | GTCTC | 1 cut(s) | 73 |
| ApoI | RAATTY | 2 cut(s) | 206, 408 |
| AsuHPI | GGTGA | 1 cut(s) | 518 |
| BbsI | GAAGAC | 1 cut(s) | 486 |
| Bbv12I | GWGCWC | 1 cut(s) | 354 |
| BceAI | ACGGC | 1 cut(s) | 228 |
| BciT130I | CCWGG | 1 cut(s) | 541 |
| BcoDI | GTCTC | 1 cut(s) | 73 |
| Bme1390I | CCNGG | 1 cut(s) | 541 |
| BmrFI | CCNGG | 1 cut(s) | 541 |
| BmsI | GCATC | 2 cut(s) | 15, 139 |
| BpiI | GAAGAC | 1 cut(s) | 486 |
| Bpu10I | CCTNAGC | 1 cut(s) | 348 |
| BsaHI | GRCGYC | 1 cut(s) | 97 |
| BsaI | GGTCTC | 1 cut(s) | 73 |
| BsaJI | CCNNGG | 1 cut(s) | 162 |
| Bse118I | RCCGGY | 1 cut(s) | 69 |
| Bse1I | ACTGG | 3 cut(s) | 135, 249, 510 |
| BseBI | CCWGG | 1 cut(s) | 541 |
| BseDI | CCNNGG | 1 cut(s) | 162 |
| BseMII | CTCAG | 1 cut(s) | 339 |
| BseNI | ACTGG | 3 cut(s) | 135, 249, 510 |
| BsiHKAI | GWGCWC | 1 cut(s) | 354 |
| BsiSI | CCGG | 1 cut(s) | 70 |
| BslFI | GGGAC | 1 cut(s) | 465 |
| BsmAI | GTCTC | 1 cut(s) | 73 |
| BsmFI | GGGAC | 1 cut(s) | 465 |
| Bso31I | GGTCTC | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 1 cut(s) | 354 |
| Bsp1407I | TGTACA | 1 cut(s) | 283 |
| Bsp143I | GATC | 2 cut(s) | 51, 225 |
| BspACI | CCGC | 1 cut(s) | 355 |
| BspCNI | CTCAG | 1 cut(s) | 340 |
| BspTNI | GGTCTC | 1 cut(s) | 73 |
| BsrFI | RCCGGY | 1 cut(s) | 69 |
| BsrGI | TGTACA | 1 cut(s) | 283 |
| BsrI | ACTGG | 3 cut(s) | 135, 249, 510 |
| BssAI | RCCGGY | 1 cut(s) | 69 |
| BssECI | CCNNGG | 1 cut(s) | 162 |
| BssMI | GATC | 2 cut(s) | 51, 225 |
| BssNI | GRCGYC | 1 cut(s) | 97 |
| Bst2UI | CCWGG | 1 cut(s) | 541 |
| Bst4CI | ACNGT | 2 cut(s) | 234, 283 |
| BstACI | GRCGYC | 1 cut(s) | 97 |
| BstAUI | TGTACA | 1 cut(s) | 283 |
| BstDEI | CTNAG | 2 cut(s) | 169, 348 |
| BstKTI | GATC | 2 cut(s) | 54, 228 |
| BstMAI | GTCTC | 1 cut(s) | 73 |
| BstMBI | GATC | 2 cut(s) | 51, 225 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstNI | CCWGG | 1 cut(s) | 541 |
| BstSCI | CCNGG | 1 cut(s) | 539 |
| BstV2I | GAAGAC | 1 cut(s) | 486 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 113 |
| BtsI | GCAGTG | 1 cut(s) | 382 |
| BtsIMutI | CAGTG | 3 cut(s) | 279, 382, 471 |
| Cfr10I | RCCGGY | 1 cut(s) | 69 |
| CseI | GACGC | 1 cut(s) | 105 |
| CsiI | ACCWGGT | 1 cut(s) | 539 |
| Csp6I | GTAC | 5 cut(s) | 11, 128, 262, 272, 284 |
| CviJI | RGCY | 5 cut(s) | 31, 117, 161, 194, 243 |
| CviKI_1 | RGCY | 5 cut(s) | 31, 117, 161, 194, 243 |
| CviQI | GTAC | 5 cut(s) | 11, 128, 262, 272, 284 |
| DdeI | CTNAG | 2 cut(s) | 169, 348 |
| DpnI | GATC | 2 cut(s) | 53, 227 |
| DpnII | GATC | 2 cut(s) | 51, 225 |
| Eco31I | GGTCTC | 1 cut(s) | 73 |
| EcoRII | CCWGG | 1 cut(s) | 539 |
| FaqI | GGGAC | 1 cut(s) | 465 |
| HapII | CCGG | 1 cut(s) | 70 |
| HgaI | GACGC | 1 cut(s) | 105 |
| Hin1I | GRCGYC | 1 cut(s) | 97 |
| HincII | GTYRAC | 1 cut(s) | 493 |
| HindII | GTYRAC | 1 cut(s) | 493 |
| HpaI | GTTAAC | 1 cut(s) | 493 |
| HpaII | CCGG | 1 cut(s) | 70 |
| HphI | GGTGA | 1 cut(s) | 518 |
| Hpy166II | GTNNAC | 4 cut(s) | 128, 254, 493, 526 |
| Hpy188III | TCNNGA | 1 cut(s) | 347 |
| Hpy8I | GTNNAC | 4 cut(s) | 128, 254, 493, 526 |
| HpyAV | CCTTC | 1 cut(s) | 539 |
| HpyCH4III | ACNGT | 2 cut(s) | 234, 283 |
| HpyCH4IV | ACGT | 2 cut(s) | 260, 522 |
| HpyCH4V | TGCA | 4 cut(s) | 238, 375, 439, 469 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 2 cut(s) | 169, 348 |
| HpySE526I | ACGT | 2 cut(s) | 260, 522 |
| Hsp92I | GRCGYC | 1 cut(s) | 97 |
| KspAI | GTTAAC | 1 cut(s) | 493 |
| Kzo9I | GATC | 2 cut(s) | 51, 225 |
| LmnI | GCTCC | 1 cut(s) | 199 |
| LpnPI | CCDG | 8 cut(s) | 83, 116, 262, 339, 360, 402, 491, 526 |
| LweI | GCATC | 2 cut(s) | 15, 139 |
| MabI | ACCWGGT | 1 cut(s) | 539 |
| MaeII | ACGT | 2 cut(s) | 260, 522 |
| MaeIII | GTNAC | 1 cut(s) | 518 |
| MalI | GATC | 2 cut(s) | 53, 227 |
| MboI | GATC | 2 cut(s) | 51, 225 |
| MboII | GAAGA | 2 cut(s) | 61, 491 |
| MhlI | GDGCHC | 1 cut(s) | 354 |
| MluCI | AATT | 7 cut(s) | 23, 107, 201, 206, 380, 408, 434 |
| MnlI | CCTC | 2 cut(s) | 172, 345 |
| MseI | TTAA | 3 cut(s) | 26, 204, 492 |
| MslI | CAYNNNNRTG | 1 cut(s) | 464 |
| MspI | CCGG | 1 cut(s) | 70 |
| MspR9I | CCNGG | 1 cut(s) | 541 |
| MvaI | CCWGG | 1 cut(s) | 541 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NdeII | GATC | 2 cut(s) | 51, 225 |
| NmuCI | GTSAC | 1 cut(s) | 518 |
| OliI | CACNNNNGTG | 1 cut(s) | 464 |
| Psp6I | CCWGG | 1 cut(s) | 539 |
| PspGI | CCWGG | 1 cut(s) | 539 |
| RsaI | GTAC | 5 cut(s) | 12, 129, 263, 273, 285 |
| RsaNI | GTAC | 5 cut(s) | 11, 128, 262, 272, 284 |
| RseI | CAYNNNNRTG | 1 cut(s) | 464 |
| SaqAI | TTAA | 3 cut(s) | 26, 204, 492 |
| Sau3AI | GATC | 2 cut(s) | 51, 225 |
| ScrFI | CCNGG | 1 cut(s) | 541 |
| SduI | GDGCHC | 1 cut(s) | 354 |
| SetI | ASST | 7 cut(s) | 196, 263, 270, 337, 525, 531, 545 |
| SexAI | ACCWGGT | 1 cut(s) | 539 |
| SfaNI | GCATC | 2 cut(s) | 15, 139 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 464 |
| Sse9I | AATT | 7 cut(s) | 23, 107, 201, 206, 380, 408, 434 |
| SsiI | CCGC | 1 cut(s) | 355 |
| StyD4I | CCNGG | 1 cut(s) | 539 |
| TaaI | ACNGT | 2 cut(s) | 234, 283 |
| TaiI | ACGT | 2 cut(s) | 263, 525 |
| TaqII | GACCGA | 1 cut(s) | 154 |
| TasI | AATT | 7 cut(s) | 23, 107, 201, 206, 380, 408, 434 |
| TatI | WGTACW | 2 cut(s) | 127, 283 |
| Tru1I | TTAA | 3 cut(s) | 26, 204, 492 |
| Tru9I | TTAA | 3 cut(s) | 26, 204, 492 |
| TscAI | CASTG | 3 cut(s) | 286, 382, 471 |
| TseFI | GTSAC | 1 cut(s) | 518 |
| Tsp45I | GTSAC | 1 cut(s) | 518 |
| TspDTI | ATGAA | 2 cut(s) | 62, 153 |
| TspRI | CASTG | 3 cut(s) | 286, 382, 471 |
| XapI | RAATTY | 2 cut(s) | 206, 408 |