FvH4_4g22470

G-quadruplex DNA unwinding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000050
Physical Location & Seq
Reverse (-)
25292893 .. 25295440
2548 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22470.t1

Sequence Viewer

Length: 768 bp
ATGAACGTAAAAAAAAAAGAGGAGACCAAGTGTGGGATCACTGTTCAAAACCTGAGAAGGGAAACTCTCAACATCACTCTTTGGGGAGACATCGCCAGATCATTCGATGTTGGGACCGTGCAAAGATCAGCTCCGCCTTTGCTTGCTGTGTTCACAAGCATGAATCCTGGAGAATATGATGGACATGTTGTGGCTTCAAAGTCGAACCATACATGCGTCTTTTTCAACCCAACCATTCCTCTGACAGGCGAGTTCTCCAAAACAGGAGACAAGGTGCGCATAACCGGTGTCATCTCCAACCATGAAACAGTTAAGAGCGGTCGAACAACCAAACCGAGTAACTGTAACAAGACAGTTTACTGCAGTGCCTCAATTCGGAAATTTGCACGAGACGGATGGTGGTATAGGAGCTGCGCAACCTCAGGCTGTTACAGGATGGTGCATAAAAATGAGGAGGCGGCCAATAAGTACTTCTGTCCAATACATGGTCTTCAAAAACCACAACCATCCTATTCAGTCAATATGACGGTCGAGGACAAAGAGAGTCGGGCCACATTGACTGTGATGGGAAGAGAGGCTGCCCAACTTTTCAACAGTAGCTGTCAAGAACTGCTAGAGAAGAGGTTCTCCCCAACTGAACAATCATTGCCTGAAGAAATTGGGGACACAATGAGGCAGGCACACCTATTTGAAATAAAGCTAAAGCCCAATCACGGTTTCATGGTCAGGAGCATTAGTTCAACGGAGAACCAGCAATTACAACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_7 Helitron_like_N Pkinase Pkinase_Tyr REPA_OB_2 WW

Protein Analysis

256

Amino Acids

28.72

Weight (kDa)

9.09

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rep_fac-A_C PF08646 121 - 237 6.8e-10 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 278, 415
AccB7I CCANNNNNTGG 1 cut(s) 485
AccBSI CCGCTC 1 cut(s) 318
AciI CCGC 3 cut(s) 134, 318, 458
AclWI GGATC 1 cut(s) 44
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 1 cut(s) 380
AcuI CTGAAG 1 cut(s) 672
AfaI GTAC 1 cut(s) 470
AfiI CCNNNNNNNGG 6 cut(s) 33, 58, 245, 375, 485, 713
AflIII ACRYGT 1 cut(s) 184
AgeI ACCGGT 1 cut(s) 284
AgsI TTSAA 7 cut(s) 47, 198, 226, 494, 592, 692, 741
AjnI CCWGG 1 cut(s) 166
AjuI GAANNNNNNNTTGG 4 cut(s) 455, 487, 701, 733
AloI GAACNNNNNNTCC 2 cut(s) 721, 753
AluBI AGCT 4 cut(s) 131, 411, 600, 700
AluI AGCT 4 cut(s) 131, 411, 600, 700
Alw26I GTCTC 4 cut(s) 17, 81, 261, 384
AlwI GGATC 1 cut(s) 44
AlwNI CAGNNNCTG 1 cut(s) 600
AoxI GGCC 2 cut(s) 459, 549
ApeKI GCWGC 2 cut(s) 411, 578
ApoI RAATTY 1 cut(s) 380
AsiGI ACCGGT 1 cut(s) 284
Asp700I GAANNNNTTC 1 cut(s) 623
AspLEI GCGC 2 cut(s) 279, 416
AspS9I GGNCC 2 cut(s) 114, 549
AvaII GGWCC 1 cut(s) 114
AxyI CCTNAGG 1 cut(s) 421
BauI CACGAG 1 cut(s) 387
BbsI GAAGAC 1 cut(s) 482
BbvI GCAGC 2 cut(s) 398, 565
BccI CCATC 5 cut(s) 173, 390, 430, 514, 559
BciT130I CCWGG 1 cut(s) 168
BcoDI GTCTC 4 cut(s) 17, 81, 261, 384
BfaI CTAG 2 cut(s) 614, 766
BfmI CTRYAG 1 cut(s) 361
BisI GCNGC 3 cut(s) 412, 459, 579
BlsI GCNGC 3 cut(s) 413, 460, 580
BmcAI AGTACT 1 cut(s) 470
Bme1390I CCNGG 1 cut(s) 168
Bme18I GGWCC 1 cut(s) 114
BmgT120I GGNCC 2 cut(s) 114, 549
BmiI GGNNCC 1 cut(s) 115
BmrFI CCNGG 1 cut(s) 168
BpiI GAAGAC 1 cut(s) 482
BpmI CTGGAG 1 cut(s) 189
BsaI GGTCTC 1 cut(s) 17
BsaWI WCCGGW 1 cut(s) 284
BsaXI ACNNNNNCTCC 6 cut(s) 14, 44, 258, 288, 721, 751
Bsc4I CCNNNNNNNGG 6 cut(s) 33, 58, 245, 375, 485, 713
Bse118I RCCGGY 1 cut(s) 284
Bse21I CCTNAGG 1 cut(s) 421
Bse3DI GCAATG 1 cut(s) 644
BseBI CCWGG 1 cut(s) 168
BseGI GGATG 3 cut(s) 401, 441, 506
BseLI CCNNNNNNNGG 6 cut(s) 33, 58, 245, 375, 485, 713
BseMI GCAATG 1 cut(s) 644
BseMII CTCAG 2 cut(s) 44, 435
BseRI GAGGAG 2 cut(s) 35, 467
BseXI GCAGC 2 cut(s) 398, 565
Bsh1285I CGRYCG 2 cut(s) 322, 531
BshFI GGCC 2 cut(s) 461, 551
BshTI ACCGGT 1 cut(s) 284
BsiEI CGRYCG 2 cut(s) 322, 531
BsiSI CCGG 1 cut(s) 285
BslFI GGGAC 2 cut(s) 127, 677
BslI CCNNNNNNNGG 6 cut(s) 33, 58, 245, 375, 485, 713
BsmAI GTCTC 4 cut(s) 17, 81, 261, 384
BsmBI CGTCTC 1 cut(s) 384
BsmFI GGGAC 2 cut(s) 127, 677
BsnI GGCC 2 cut(s) 461, 551
Bso31I GGTCTC 1 cut(s) 17
Bsp143I GATC 3 cut(s) 36, 98, 125
BspACI CCGC 3 cut(s) 134, 318, 458
BspANI GGCC 2 cut(s) 461, 551
BspCNI CTCAG 2 cut(s) 45, 434
BspLI GGNNCC 1 cut(s) 115
BspMAI CTGCAG 1 cut(s) 365
BspPI GGATC 1 cut(s) 44
BspTNI GGTCTC 1 cut(s) 17
BsrBI CCGCTC 1 cut(s) 318
BsrDI GCAATG 1 cut(s) 644
BsrFI RCCGGY 1 cut(s) 284
BssAI RCCGGY 1 cut(s) 284
BssMI GATC 3 cut(s) 36, 98, 125
BssSI CACGAG 1 cut(s) 387
Bst2BI CACGAG 1 cut(s) 387
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 9 cut(s) 43, 118, 310, 344, 355, 529, 562, 596, 716
Bst6I CTCTTC 2 cut(s) 565, 614
BstC8I GCNNGC 2 cut(s) 144, 678
BstDEI CTNAG 2 cut(s) 53, 421
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 3 cut(s) 401, 441, 506
BstHHI GCGC 2 cut(s) 279, 416
BstKTI GATC 3 cut(s) 39, 101, 128
BstMAI GTCTC 4 cut(s) 17, 81, 261, 384
BstMBI GATC 3 cut(s) 36, 98, 125
BstMCI CGRYCG 2 cut(s) 322, 531
BstNI CCWGG 1 cut(s) 168
BstNSI RCATGY 2 cut(s) 188, 216
BstSCI CCNGG 1 cut(s) 166
BstSFI CTRYAG 1 cut(s) 361
BstV1I GCAGC 2 cut(s) 398, 565
BstV2I GAAGAC 1 cut(s) 482
Bsu36I CCTNAGG 1 cut(s) 421
BsuRI GGCC 2 cut(s) 461, 551
BtgZI GCGATG 1 cut(s) 76
BtsCI GGATG 3 cut(s) 401, 441, 506
BtsI GCAGTG 1 cut(s) 370
BtsIMutI CAGTG 2 cut(s) 39, 370
Cac8I GCNNGC 2 cut(s) 144, 678
CaiI CAGNNNCTG 1 cut(s) 600
CfoI GCGC 2 cut(s) 279, 416
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 2 cut(s) 114, 549
CseI GACGC 1 cut(s) 205
Csp6I GTAC 1 cut(s) 469
CspAI ACCGGT 1 cut(s) 284
CviAII CATG 6 cut(s) 160, 185, 213, 302, 485, 721
CviQI GTAC 1 cut(s) 469
DdeI CTNAG 2 cut(s) 53, 421
DpnI GATC 3 cut(s) 38, 100, 127
DpnII GATC 3 cut(s) 36, 98, 125
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 2 cut(s) 565, 614
EarI CTCTTC 2 cut(s) 565, 614
EciI GGCGGA 1 cut(s) 123
Eco31I GGTCTC 1 cut(s) 17
Eco47I GGWCC 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 672
Eco81I CCTNAGG 1 cut(s) 421
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoRII CCWGG 1 cut(s) 166
Esp3I CGTCTC 1 cut(s) 384
FaeI CATG 6 cut(s) 163, 188, 216, 305, 488, 724
FaqI GGGAC 2 cut(s) 127, 677
FatI CATG 6 cut(s) 159, 184, 212, 301, 484, 720
Fnu4HI GCNGC 3 cut(s) 412, 459, 579
FokI GGATG 3 cut(s) 408, 448, 493
Fsp4HI GCNGC 3 cut(s) 412, 459, 579
FspAI RTGCGCAY 1 cut(s) 278
FspBI CTAG 2 cut(s) 614, 766
FspI TGCGCA 2 cut(s) 278, 415
GlaI GCGC 2 cut(s) 278, 415
GluI GCNGC 3 cut(s) 412, 459, 579
GsuI CTGGAG 1 cut(s) 189
HaeIII GGCC 2 cut(s) 461, 551
HapII CCGG 1 cut(s) 285
HgaI GACGC 1 cut(s) 205
HhaI GCGC 2 cut(s) 279, 416
Hin1II CATG 6 cut(s) 163, 188, 216, 305, 488, 724
Hin6I GCGC 2 cut(s) 277, 414
HinP1I GCGC 2 cut(s) 277, 414
HinfI GANTC 2 cut(s) 163, 544
HpaII CCGG 1 cut(s) 285
Hpy166II GTNNAC 2 cut(s) 153, 358
Hpy188I TCNGA 2 cut(s) 243, 378
Hpy188III TCNNGA 2 cut(s) 605, 727
Hpy8I GTNNAC 2 cut(s) 153, 358
HpyAV CCTTC 1 cut(s) 51
HpyCH4III ACNGT 9 cut(s) 43, 118, 310, 344, 355, 529, 562, 596, 716
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 4 cut(s) 121, 363, 386, 442
HpyF3I CTNAG 2 cut(s) 53, 421
HpySE526I ACGT 1 cut(s) 6
Hsp92II CATG 6 cut(s) 163, 188, 216, 305, 488, 724
HspAI GCGC 2 cut(s) 277, 414
Kzo9I GATC 3 cut(s) 36, 98, 125
LmnI GCTCC 3 cut(s) 136, 408, 729
Lsp1109I GCAGC 2 cut(s) 398, 565
MaeI CTAG 2 cut(s) 614, 766
MaeII ACGT 1 cut(s) 6
MaeIII GTNAC 3 cut(s) 338, 344, 428
MalI GATC 3 cut(s) 38, 100, 127
MbiI CCGCTC 1 cut(s) 318
MboI GATC 3 cut(s) 36, 98, 125
MboII GAAGA 4 cut(s) 482, 582, 631, 665
MluCI AATT 4 cut(s) 372, 380, 657, 755
MlyI GAGTC 1 cut(s) 553
MmeI TCCRAC 1 cut(s) 321
MroXI GAANNNNTTC 1 cut(s) 623
MseI TTAA 1 cut(s) 312
MslI CAYNNNNRTG 2 cut(s) 158, 447
MspI CCGG 1 cut(s) 285
MspR9I CCNGG 1 cut(s) 168
MvaI CCWGG 1 cut(s) 168
NdeII GATC 3 cut(s) 36, 98, 125
NlaIII CATG 6 cut(s) 163, 188, 216, 305, 488, 724
NlaIV GGNNCC 1 cut(s) 115
NsbI TGCGCA 2 cut(s) 278, 415
NspI RCATGY 2 cut(s) 188, 216
PciI ACATGT 1 cut(s) 184
PdmI GAANNNNTTC 1 cut(s) 623
PfeI GAWTC 1 cut(s) 163
PflMI CCANNNNNTGG 1 cut(s) 485
PfoI TCCNGGA 1 cut(s) 166
PinAI ACCGGT 1 cut(s) 284
PkrI GCNGC 3 cut(s) 413, 460, 580
PleI GAGTC 1 cut(s) 552
PpsI GAGTC 1 cut(s) 552
PscI ACATGT 1 cut(s) 184
Psp6I CCWGG 1 cut(s) 166
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 1 cut(s) 115
PspPI GGNCC 2 cut(s) 114, 549
PstI CTGCAG 1 cut(s) 365
PstNI CAGNNNCTG 1 cut(s) 600
RsaI GTAC 1 cut(s) 470
RsaNI GTAC 1 cut(s) 469
RseI CAYNNNNRTG 2 cut(s) 158, 447
SaqAI TTAA 1 cut(s) 312
SatI GCNGC 3 cut(s) 412, 459, 579
Sau3AI GATC 3 cut(s) 36, 98, 125
Sau96I GGNCC 2 cut(s) 114, 549
ScaI AGTACT 1 cut(s) 470
SchI GAGTC 1 cut(s) 553
ScrFI CCNGG 1 cut(s) 168
SfcI CTRYAG 1 cut(s) 361
SinI GGWCC 1 cut(s) 114
SmiMI CAYNNNNRTG 2 cut(s) 158, 447
Sse9I AATT 4 cut(s) 372, 380, 657, 755
SsiI CCGC 3 cut(s) 134, 318, 458
SspMI CTAG 2 cut(s) 614, 766
StyD4I CCNGG 1 cut(s) 166
TaaI ACNGT 9 cut(s) 43, 118, 310, 344, 355, 529, 562, 596, 716
TaiI ACGT 1 cut(s) 9
TaqI TCGA 4 cut(s) 105, 203, 322, 531
TasI AATT 4 cut(s) 372, 380, 657, 755
TatI WGTACW 1 cut(s) 468
TauI GCSGC 1 cut(s) 461
TfiI GAWTC 1 cut(s) 163
Tru1I TTAA 1 cut(s) 312
Tru9I TTAA 1 cut(s) 312
TscAI CASTG 2 cut(s) 46, 370
TseI GCWGC 2 cut(s) 411, 578
TspDTI ATGAA 4 cut(s) 17, 176, 318, 709
TspGWI ACGGA 2 cut(s) 408, 758
TspRI CASTG 2 cut(s) 46, 370
Van91I CCANNNNNTGG 1 cut(s) 485
VpaK11BI GGWCC 1 cut(s) 114
XagI CCTNNNNNAGG 1 cut(s) 243
XapI RAATTY 1 cut(s) 380
XceI RCATGY 2 cut(s) 188, 216
XmnI GAANNNNTTC 1 cut(s) 623
XspI CTAG 2 cut(s) 614, 766
ZrmI AGTACT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.