DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 18 - 116 | 1.3e-14 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 466 |
| AcsI | RAATTY | 3 cut(s) | 13, 375, 404 |
| AfaI | GTAC | 1 cut(s) | 524 |
| AgsI | TTSAA | 5 cut(s) | 10, 298, 331, 350, 359 |
| AjnI | CCWGG | 1 cut(s) | 285 |
| AluBI | AGCT | 2 cut(s) | 119, 578 |
| AluI | AGCT | 2 cut(s) | 119, 578 |
| Alw26I | GTCTC | 2 cut(s) | 155, 506 |
| ApoI | RAATTY | 3 cut(s) | 13, 375, 404 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BbsI | GAAGAC | 1 cut(s) | 40 |
| BccI | CCATC | 2 cut(s) | 140, 472 |
| BciT130I | CCWGG | 1 cut(s) | 287 |
| BclI | TGATCA | 3 cut(s) | 307, 409, 433 |
| BcoDI | GTCTC | 2 cut(s) | 155, 506 |
| BfuAI | ACCTGC | 1 cut(s) | 466 |
| Bme1390I | CCNGG | 1 cut(s) | 287 |
| BmiI | GGNNCC | 1 cut(s) | 66 |
| BmrFI | CCNGG | 1 cut(s) | 287 |
| BpiI | GAAGAC | 1 cut(s) | 40 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| Bse3DI | GCAATG | 1 cut(s) | 342 |
| BseBI | CCWGG | 1 cut(s) | 287 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseMI | GCAATG | 1 cut(s) | 342 |
| BsmAI | GTCTC | 2 cut(s) | 155, 506 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| Bsp143I | GATC | 4 cut(s) | 87, 307, 409, 433 |
| BspHI | TCATGA | 2 cut(s) | 55, 532 |
| BspLI | GGNNCC | 1 cut(s) | 66 |
| BspMI | ACCTGC | 1 cut(s) | 466 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BsrDI | GCAATG | 1 cut(s) | 342 |
| BssMI | GATC | 4 cut(s) | 87, 307, 409, 433 |
| Bst2UI | CCWGG | 1 cut(s) | 287 |
| Bst4CI | ACNGT | 1 cut(s) | 595 |
| BstC8I | GCNNGC | 1 cut(s) | 424 |
| BstDEI | CTNAG | 1 cut(s) | 120 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstKTI | GATC | 4 cut(s) | 90, 310, 412, 436 |
| BstMAI | GTCTC | 2 cut(s) | 155, 506 |
| BstMBI | GATC | 4 cut(s) | 87, 307, 409, 433 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 191 |
| BstNI | CCWGG | 1 cut(s) | 287 |
| BstSCI | CCNGG | 1 cut(s) | 285 |
| BstV2I | GAAGAC | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| BveI | ACCTGC | 1 cut(s) | 466 |
| Cac8I | GCNNGC | 1 cut(s) | 424 |
| CciI | TCATGA | 2 cut(s) | 55, 532 |
| CseI | GACGC | 1 cut(s) | 191 |
| Csp6I | GTAC | 1 cut(s) | 523 |
| CviAII | CATG | 5 cut(s) | 40, 56, 191, 427, 533 |
| CviJI | RGCY | 3 cut(s) | 119, 529, 578 |
| CviKI_1 | RGCY | 3 cut(s) | 119, 529, 578 |
| CviQI | GTAC | 1 cut(s) | 523 |
| DdeI | CTNAG | 1 cut(s) | 120 |
| DpnI | GATC | 4 cut(s) | 89, 309, 411, 435 |
| DpnII | GATC | 4 cut(s) | 87, 307, 409, 433 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 1 cut(s) | 285 |
| FaeI | CATG | 5 cut(s) | 43, 59, 194, 430, 536 |
| FaiI | YATR | 9 cut(s) | 41, 57, 101, 129, 192, 255, 428, 438, 534 |
| FatI | CATG | 5 cut(s) | 39, 55, 190, 426, 532 |
| FbaI | TGATCA | 3 cut(s) | 307, 409, 433 |
| FokI | GGATG | 1 cut(s) | 56 |
| HgaI | GACGC | 1 cut(s) | 191 |
| Hin1II | CATG | 5 cut(s) | 43, 59, 194, 430, 536 |
| HinfI | GANTC | 4 cut(s) | 206, 301, 316, 390 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy166II | GTNNAC | 1 cut(s) | 226 |
| Hpy188I | TCNGA | 4 cut(s) | 79, 92, 211, 315 |
| Hpy188III | TCNNGA | 7 cut(s) | 56, 105, 163, 298, 305, 380, 533 |
| Hpy8I | GTNNAC | 1 cut(s) | 226 |
| HpyAV | CCTTC | 1 cut(s) | 353 |
| HpyCH4III | ACNGT | 1 cut(s) | 595 |
| HpyCH4V | TGCA | 2 cut(s) | 194, 335 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 191 |
| HpyF3I | CTNAG | 1 cut(s) | 120 |
| Hsp92II | CATG | 5 cut(s) | 43, 59, 194, 430, 536 |
| Ksp22I | TGATCA | 3 cut(s) | 307, 409, 433 |
| Kzo9I | GATC | 4 cut(s) | 87, 307, 409, 433 |
| LpnPI | CCDG | 9 cut(s) | 44, 272, 299, 384, 393, 471, 496, 511, 522 |
| MaeIII | GTNAC | 1 cut(s) | 179 |
| MalI | GATC | 4 cut(s) | 89, 309, 411, 435 |
| MboI | GATC | 4 cut(s) | 87, 307, 409, 433 |
| MboII | GAAGA | 4 cut(s) | 22, 40, 262, 563 |
| MluCI | AATT | 6 cut(s) | 13, 195, 265, 375, 404, 441 |
| MlyI | GAGTC | 1 cut(s) | 325 |
| MnlI | CCTC | 3 cut(s) | 35, 529, 541 |
| MseI | TTAA | 1 cut(s) | 598 |
| MspA1I | CMGCKG | 1 cut(s) | 578 |
| MspR9I | CCNGG | 1 cut(s) | 287 |
| MvaI | CCWGG | 1 cut(s) | 287 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 191 |
| NdeII | GATC | 4 cut(s) | 87, 307, 409, 433 |
| NlaIII | CATG | 5 cut(s) | 43, 59, 194, 430, 536 |
| NlaIV | GGNNCC | 1 cut(s) | 66 |
| NmuCI | GTSAC | 1 cut(s) | 179 |
| PagI | TCATGA | 2 cut(s) | 55, 532 |
| PfeI | GAWTC | 3 cut(s) | 206, 301, 390 |
| PleI | GAGTC | 1 cut(s) | 324 |
| PpsI | GAGTC | 1 cut(s) | 324 |
| Psp6I | CCWGG | 1 cut(s) | 285 |
| PspGI | CCWGG | 1 cut(s) | 285 |
| PspN4I | GGNNCC | 1 cut(s) | 66 |
| PvuII | CAGCTG | 1 cut(s) | 578 |
| RsaI | GTAC | 1 cut(s) | 524 |
| RsaNI | GTAC | 1 cut(s) | 523 |
| SaqAI | TTAA | 1 cut(s) | 598 |
| Sau3AI | GATC | 4 cut(s) | 87, 307, 409, 433 |
| SchI | GAGTC | 1 cut(s) | 325 |
| ScrFI | CCNGG | 1 cut(s) | 287 |
| SetI | ASST | 7 cut(s) | 27, 70, 121, 252, 460, 485, 580 |
| Sse9I | AATT | 6 cut(s) | 13, 195, 265, 375, 404, 441 |
| StyD4I | CCNGG | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 595 |
| TaqI | TCGA | 2 cut(s) | 104, 417 |
| TasI | AATT | 6 cut(s) | 13, 195, 265, 375, 404, 441 |
| TatI | WGTACW | 1 cut(s) | 522 |
| TfiI | GAWTC | 3 cut(s) | 206, 301, 390 |
| Tru1I | TTAA | 1 cut(s) | 598 |
| Tru9I | TTAA | 1 cut(s) | 598 |
| TseFI | GTSAC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 179 |
| TspGWI | ACGGA | 1 cut(s) | 314 |
| XapI | RAATTY | 3 cut(s) | 13, 375, 404 |