DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 310 |
| AcsI | RAATTY | 1 cut(s) | 363 |
| AcyI | GRCGYC | 1 cut(s) | 52 |
| AfaI | GTAC | 3 cut(s) | 84, 218, 240 |
| AgeI | ACCGGT | 1 cut(s) | 85 |
| AgsI | TTSAA | 5 cut(s) | 67, 113, 253, 271, 362 |
| AluBI | AGCT | 1 cut(s) | 149 |
| AluI | AGCT | 1 cut(s) | 149 |
| Alw21I | GWGCWC | 1 cut(s) | 309 |
| Alw26I | GTCTC | 1 cut(s) | 28 |
| ApoI | RAATTY | 1 cut(s) | 363 |
| AsiGI | ACCGGT | 1 cut(s) | 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 309 |
| BceAI | ACGGC | 1 cut(s) | 183 |
| BcoDI | GTCTC | 1 cut(s) | 28 |
| BmsI | GCATC | 1 cut(s) | 94 |
| Bpu10I | CCTNAGC | 1 cut(s) | 303 |
| BsaHI | GRCGYC | 1 cut(s) | 52 |
| BsaI | GGTCTC | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| BsaWI | WCCGGW | 1 cut(s) | 85 |
| Bse118I | RCCGGY | 2 cut(s) | 24, 85 |
| Bse1I | ACTGG | 1 cut(s) | 204 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 1 cut(s) | 204 |
| BshTI | ACCGGT | 1 cut(s) | 85 |
| BsiHKAI | GWGCWC | 1 cut(s) | 309 |
| BsiSI | CCGG | 2 cut(s) | 25, 86 |
| BsmAI | GTCTC | 1 cut(s) | 28 |
| Bso31I | GGTCTC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 1 cut(s) | 309 |
| Bsp1407I | TGTACA | 1 cut(s) | 238 |
| Bsp143I | GATC | 2 cut(s) | 6, 180 |
| BspACI | CCGC | 1 cut(s) | 310 |
| BspCNI | CTCAG | 1 cut(s) | 295 |
| BspTNI | GGTCTC | 1 cut(s) | 28 |
| BsrFI | RCCGGY | 2 cut(s) | 24, 85 |
| BsrGI | TGTACA | 1 cut(s) | 238 |
| BsrI | ACTGG | 1 cut(s) | 204 |
| BssAI | RCCGGY | 2 cut(s) | 24, 85 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 2 cut(s) | 6, 180 |
| BssNI | GRCGYC | 1 cut(s) | 52 |
| BssT1I | CCWWGG | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 3 cut(s) | 189, 238, 332 |
| BstACI | GRCGYC | 1 cut(s) | 52 |
| BstAUI | TGTACA | 1 cut(s) | 238 |
| BstDEI | CTNAG | 2 cut(s) | 124, 303 |
| BstKTI | GATC | 2 cut(s) | 9, 183 |
| BstMAI | GTCTC | 1 cut(s) | 28 |
| BstMBI | GATC | 2 cut(s) | 6, 180 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 113 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 2 cut(s) | 234, 337 |
| Cfr10I | RCCGGY | 2 cut(s) | 24, 85 |
| CseI | GACGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 3 cut(s) | 83, 217, 239 |
| CspAI | ACCGGT | 1 cut(s) | 85 |
| CviJI | RGCY | 4 cut(s) | 72, 116, 149, 198 |
| CviKI_1 | RGCY | 4 cut(s) | 72, 116, 149, 198 |
| CviQI | GTAC | 3 cut(s) | 83, 217, 239 |
| DdeI | CTNAG | 2 cut(s) | 124, 303 |
| DpnI | GATC | 2 cut(s) | 8, 182 |
| DpnII | GATC | 2 cut(s) | 6, 180 |
| Eco130I | CCWWGG | 1 cut(s) | 117 |
| Eco31I | GGTCTC | 1 cut(s) | 28 |
| EcoT14I | CCWWGG | 1 cut(s) | 117 |
| ErhI | CCWWGG | 1 cut(s) | 117 |
| FaiI | YATR | 8 cut(s) | 22, 138, 173, 175, 177, 195, 227, 247 |
| HapII | CCGG | 2 cut(s) | 25, 86 |
| HgaI | GACGC | 1 cut(s) | 60 |
| Hin1I | GRCGYC | 1 cut(s) | 52 |
| HpaII | CCGG | 2 cut(s) | 25, 86 |
| Hpy166II | GTNNAC | 2 cut(s) | 83, 209 |
| Hpy188III | TCNNGA | 1 cut(s) | 302 |
| Hpy8I | GTNNAC | 2 cut(s) | 83, 209 |
| HpyCH4III | ACNGT | 3 cut(s) | 189, 238, 332 |
| HpyCH4IV | ACGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 113 |
| HpyF3I | CTNAG | 2 cut(s) | 124, 303 |
| HpySE526I | ACGT | 1 cut(s) | 215 |
| Hsp92I | GRCGYC | 1 cut(s) | 52 |
| Kzo9I | GATC | 2 cut(s) | 6, 180 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| LpnPI | CCDG | 6 cut(s) | 38, 99, 217, 294, 315, 357 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeII | ACGT | 1 cut(s) | 215 |
| MalI | GATC | 2 cut(s) | 8, 182 |
| MboI | GATC | 2 cut(s) | 6, 180 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MhlI | GDGCHC | 1 cut(s) | 309 |
| MluCI | AATT | 5 cut(s) | 62, 156, 335, 363, 376 |
| MnlI | CCTC | 1 cut(s) | 300 |
| MseI | TTAA | 2 cut(s) | 159, 379 |
| MspI | CCGG | 2 cut(s) | 25, 86 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 113 |
| NdeII | GATC | 2 cut(s) | 6, 180 |
| PinAI | ACCGGT | 1 cut(s) | 85 |
| RsaI | GTAC | 3 cut(s) | 84, 218, 240 |
| RsaNI | GTAC | 3 cut(s) | 83, 217, 239 |
| SaqAI | TTAA | 2 cut(s) | 159, 379 |
| Sau3AI | GATC | 2 cut(s) | 6, 180 |
| SduI | GDGCHC | 1 cut(s) | 309 |
| SetI | ASST | 6 cut(s) | 151, 218, 225, 292, 355, 376 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| Sse9I | AATT | 5 cut(s) | 62, 156, 335, 363, 376 |
| SsiI | CCGC | 1 cut(s) | 310 |
| StyI | CCWWGG | 1 cut(s) | 117 |
| TaaI | ACNGT | 3 cut(s) | 189, 238, 332 |
| TaiI | ACGT | 1 cut(s) | 218 |
| TasI | AATT | 5 cut(s) | 62, 156, 335, 363, 376 |
| TatI | WGTACW | 1 cut(s) | 238 |
| Tru1I | TTAA | 2 cut(s) | 159, 379 |
| Tru9I | TTAA | 2 cut(s) | 159, 379 |
| TscAI | CASTG | 2 cut(s) | 241, 337 |
| TspDTI | ATGAA | 2 cut(s) | 17, 108 |
| TspRI | CASTG | 2 cut(s) | 241, 337 |
| XapI | RAATTY | 1 cut(s) | 363 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 115 |