G-quadruplex DNA unwinding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 90 - 176 | 7.1e-07 | Domain of unknown function DUF223 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 668 |
| AccI | GTMKAC | 1 cut(s) | 672 |
| AciI | CCGC | 2 cut(s) | 32, 677 |
| AcsI | RAATTY | 2 cut(s) | 209, 681 |
| AfaI | GTAC | 1 cut(s) | 820 |
| AluBI | AGCT | 2 cut(s) | 47, 272 |
| AluI | AGCT | 2 cut(s) | 47, 272 |
| Alw21I | GWGCWC | 1 cut(s) | 274 |
| Alw26I | GTCTC | 1 cut(s) | 197 |
| Ama87I | CYCGRG | 1 cut(s) | 273 |
| AoxI | GGCC | 1 cut(s) | 293 |
| ApeKI | GCWGC | 2 cut(s) | 29, 44 |
| ApoI | RAATTY | 2 cut(s) | 209, 681 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 246 |
| AspS9I | GGNCC | 1 cut(s) | 294 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| AvaI | CYCGRG | 1 cut(s) | 273 |
| BanII | GRGCYC | 1 cut(s) | 274 |
| Bbv12I | GWGCWC | 1 cut(s) | 274 |
| BbvI | GCAGC | 2 cut(s) | 16, 56 |
| BccI | CCATC | 2 cut(s) | 34, 317 |
| BclI | TGATCA | 1 cut(s) | 484 |
| BcoDI | GTCTC | 1 cut(s) | 197 |
| BfuAI | ACCTGC | 1 cut(s) | 668 |
| BglII | AGATCT | 1 cut(s) | 753 |
| BisI | GCNGC | 2 cut(s) | 30, 45 |
| BlsI | GCNGC | 2 cut(s) | 31, 46 |
| BmeT110I | CYCGRG | 1 cut(s) | 273 |
| BmgT120I | GGNCC | 1 cut(s) | 294 |
| BmsI | GCATC | 3 cut(s) | 43, 349, 730 |
| Bpu10I | CCTNAGC | 1 cut(s) | 48 |
| Bsa29I | ATCGAT | 2 cut(s) | 345, 551 |
| BsaI | GGTCTC | 1 cut(s) | 197 |
| BsaWI | WCCGGW | 1 cut(s) | 510 |
| Bse1I | ACTGG | 2 cut(s) | 395, 718 |
| BseCI | ATCGAT | 2 cut(s) | 345, 551 |
| BseGI | GGATG | 4 cut(s) | 45, 58, 519, 722 |
| BseNI | ACTGG | 2 cut(s) | 395, 718 |
| BseXI | GCAGC | 2 cut(s) | 16, 56 |
| BshFI | GGCC | 1 cut(s) | 295 |
| BshVI | ATCGAT | 2 cut(s) | 345, 551 |
| BsiHKAI | GWGCWC | 1 cut(s) | 274 |
| BsiHKCI | CYCGRG | 1 cut(s) | 273 |
| BsiSI | CCGG | 1 cut(s) | 511 |
| BsmAI | GTCTC | 1 cut(s) | 197 |
| BsmI | GAATGC | 1 cut(s) | 566 |
| BsnI | GGCC | 1 cut(s) | 295 |
| Bso31I | GGTCTC | 1 cut(s) | 197 |
| BsoBI | CYCGRG | 1 cut(s) | 273 |
| Bsp1286I | GDGCHC | 1 cut(s) | 274 |
| Bsp143I | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| BspACI | CCGC | 2 cut(s) | 32, 677 |
| BspANI | GGCC | 1 cut(s) | 295 |
| BspDI | ATCGAT | 2 cut(s) | 345, 551 |
| BspHI | TCATGA | 1 cut(s) | 487 |
| BspMI | ACCTGC | 1 cut(s) | 668 |
| BspTNI | GGTCTC | 1 cut(s) | 197 |
| BsrI | ACTGG | 2 cut(s) | 395, 718 |
| BssMI | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| Bst6I | CTCTTC | 1 cut(s) | 547 |
| BstDEI | CTNAG | 2 cut(s) | 48, 96 |
| BstF5I | GGATG | 4 cut(s) | 45, 58, 519, 722 |
| BstKTI | GATC | 5 cut(s) | 140, 487, 613, 756, 802 |
| BstMAI | GTCTC | 1 cut(s) | 197 |
| BstMBI | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 53, 278, 368 |
| BstV1I | GCAGC | 2 cut(s) | 16, 56 |
| BstX2I | RGATCY | 1 cut(s) | 753 |
| BstYI | RGATCY | 1 cut(s) | 753 |
| Bsu15I | ATCGAT | 2 cut(s) | 345, 551 |
| BsuRI | GGCC | 1 cut(s) | 295 |
| BsuTUI | ATCGAT | 2 cut(s) | 345, 551 |
| BtgZI | GCGATG | 1 cut(s) | 372 |
| BtsCI | GGATG | 4 cut(s) | 45, 58, 519, 722 |
| BtsIMutI | CAGTG | 3 cut(s) | 220, 592, 711 |
| BveI | ACCTGC | 1 cut(s) | 668 |
| CciI | TCATGA | 1 cut(s) | 487 |
| Cfr13I | GGNCC | 1 cut(s) | 294 |
| ClaI | ATCGAT | 2 cut(s) | 345, 551 |
| Csp6I | GTAC | 1 cut(s) | 819 |
| CviAII | CATG | 4 cut(s) | 131, 368, 488, 664 |
| CviJI | RGCY | 5 cut(s) | 47, 272, 295, 328, 768 |
| CviKI_1 | RGCY | 5 cut(s) | 47, 272, 295, 328, 768 |
| CviQI | GTAC | 1 cut(s) | 819 |
| DdeI | CTNAG | 2 cut(s) | 48, 96 |
| DpnI | GATC | 5 cut(s) | 139, 486, 612, 755, 801 |
| DpnII | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| Eam1104I | CTCTTC | 1 cut(s) | 547 |
| EarI | CTCTTC | 1 cut(s) | 547 |
| Ecl136II | GAGCTC | 1 cut(s) | 272 |
| Eco24I | GRGCYC | 1 cut(s) | 274 |
| Eco31I | GGTCTC | 1 cut(s) | 197 |
| Eco32I | GATATC | 1 cut(s) | 316 |
| Eco53kI | GAGCTC | 1 cut(s) | 272 |
| Eco88I | CYCGRG | 1 cut(s) | 273 |
| EcoICRI | GAGCTC | 1 cut(s) | 272 |
| EcoRI | GAATTC | 1 cut(s) | 209 |
| EcoRV | GATATC | 1 cut(s) | 316 |
| EcoT22I | ATGCAT | 1 cut(s) | 568 |
| EcoT38I | GRGCYC | 1 cut(s) | 274 |
| FaeI | CATG | 4 cut(s) | 134, 371, 491, 667 |
| FatI | CATG | 4 cut(s) | 130, 367, 487, 663 |
| FauI | CCCGC | 1 cut(s) | 684 |
| FbaI | TGATCA | 1 cut(s) | 484 |
| FblI | GTMKAC | 1 cut(s) | 672 |
| Fnu4HI | GCNGC | 2 cut(s) | 30, 45 |
| FokI | GGATG | 4 cut(s) | 52, 65, 526, 729 |
| FriOI | GRGCYC | 1 cut(s) | 274 |
| Fsp4HI | GCNGC | 2 cut(s) | 30, 45 |
| GluI | GCNGC | 2 cut(s) | 30, 45 |
| HaeIII | GGCC | 1 cut(s) | 295 |
| HapII | CCGG | 1 cut(s) | 511 |
| Hin1II | CATG | 4 cut(s) | 134, 371, 491, 667 |
| HinfI | GANTC | 7 cut(s) | 86, 383, 539, 553, 633, 652, 783 |
| HpaII | CCGG | 1 cut(s) | 511 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy166II | GTNNAC | 2 cut(s) | 673, 821 |
| Hpy188I | TCNGA | 3 cut(s) | 198, 615, 624 |
| Hpy188III | TCNNGA | 6 cut(s) | 239, 453, 488, 536, 645, 722 |
| Hpy8I | GTNNAC | 2 cut(s) | 673, 821 |
| HpyAV | CCTTC | 2 cut(s) | 29, 413 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 566, 663, 743 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 53, 278, 368 |
| HpyF3I | CTNAG | 2 cut(s) | 48, 96 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 4 cut(s) | 134, 371, 491, 667 |
| Ksp22I | TGATCA | 1 cut(s) | 484 |
| Kzo9I | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| LpnPI | CCDG | 7 cut(s) | 408, 409, 524, 630, 673, 699, 810 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 56 |
| LweI | GCATC | 3 cut(s) | 43, 349, 730 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MaeIII | GTNAC | 1 cut(s) | 400 |
| MalI | GATC | 5 cut(s) | 139, 486, 612, 755, 801 |
| MboI | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| MboII | GAAGA | 5 cut(s) | 272, 534, 620, 746, 763 |
| MfeI | CAATTG | 2 cut(s) | 5, 744 |
| MflI | RGATCY | 1 cut(s) | 753 |
| MhlI | GDGCHC | 1 cut(s) | 274 |
| MluCI | AATT | 6 cut(s) | 5, 209, 251, 375, 681, 744 |
| MlyI | GAGTC | 1 cut(s) | 533 |
| MnlI | CCTC | 8 cut(s) | 285, 409, 484, 509, 556, 584, 696, 804 |
| Mph1103I | ATGCAT | 1 cut(s) | 568 |
| MroXI | GAANNNNTTC | 1 cut(s) | 246 |
| MseI | TTAA | 1 cut(s) | 507 |
| MspI | CCGG | 1 cut(s) | 511 |
| MunI | CAATTG | 2 cut(s) | 5, 744 |
| Mva1269I | GAATGC | 1 cut(s) | 566 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 53, 278, 368 |
| NdeII | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| NlaIII | CATG | 4 cut(s) | 134, 371, 491, 667 |
| NmeAIII | GCCGAG | 1 cut(s) | 191 |
| NsiI | ATGCAT | 1 cut(s) | 568 |
| PagI | TCATGA | 1 cut(s) | 487 |
| PctI | GAATGC | 1 cut(s) | 566 |
| PdmI | GAANNNNTTC | 1 cut(s) | 246 |
| PfeI | GAWTC | 6 cut(s) | 86, 383, 553, 633, 652, 783 |
| PkrI | GCNGC | 2 cut(s) | 31, 46 |
| PleI | GAGTC | 1 cut(s) | 533 |
| PpsI | GAGTC | 1 cut(s) | 533 |
| Psp124BI | GAGCTC | 1 cut(s) | 274 |
| PspPI | GGNCC | 1 cut(s) | 294 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 640, 672 |
| PsuI | RGATCY | 1 cut(s) | 753 |
| RsaI | GTAC | 1 cut(s) | 820 |
| RsaNI | GTAC | 1 cut(s) | 819 |
| SacI | GAGCTC | 1 cut(s) | 274 |
| SaqAI | TTAA | 1 cut(s) | 507 |
| SatI | GCNGC | 2 cut(s) | 30, 45 |
| Sau3AI | GATC | 5 cut(s) | 137, 484, 610, 753, 799 |
| Sau96I | GGNCC | 1 cut(s) | 294 |
| SchI | GAGTC | 1 cut(s) | 533 |
| SduI | GDGCHC | 1 cut(s) | 274 |
| SetI | ASST | 9 cut(s) | 16, 49, 127, 247, 274, 501, 576, 662, 815 |
| SfaNI | GCATC | 3 cut(s) | 43, 349, 730 |
| Sse9I | AATT | 6 cut(s) | 5, 209, 251, 375, 681, 744 |
| SsiI | CCGC | 2 cut(s) | 32, 677 |
| SstI | GAGCTC | 1 cut(s) | 274 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TaqI | TCGA | 4 cut(s) | 306, 345, 551, 781 |
| TaqII | GACCGA | 1 cut(s) | 221 |
| TasI | AATT | 6 cut(s) | 5, 209, 251, 375, 681, 744 |
| TatI | WGTACW | 1 cut(s) | 818 |
| TfiI | GAWTC | 6 cut(s) | 86, 383, 553, 633, 652, 783 |
| Tru1I | TTAA | 1 cut(s) | 507 |
| Tru9I | TTAA | 1 cut(s) | 507 |
| TscAI | CASTG | 3 cut(s) | 220, 592, 718 |
| TseI | GCWGC | 2 cut(s) | 29, 44 |
| TspDTI | ATGAA | 7 cut(s) | 36, 192, 244, 320, 363, 396, 741 |
| TspRI | CASTG | 3 cut(s) | 220, 592, 718 |
| XapI | RAATTY | 2 cut(s) | 209, 681 |
| XmiI | GTMKAC | 1 cut(s) | 672 |
| XmnI | GAANNNNTTC | 1 cut(s) | 246 |
| Zsp2I | ATGCAT | 1 cut(s) | 568 |