RchiOBHm_Chr2g0141711

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
59237280 .. 59252525
15246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51196

Sequence Viewer

Length: 1488 bp
ATGGCAAGACCAACACTGATCCATGAACTAAGACCATTTCAGCTGAATTTCACCATGAGGATTAGAGTTTCAAGGATATGGAGACCACAAAGATTCCAAAGTGAAATATATGATGGTCTTCACAATATCTTAACTGATGAAAGAGGAGATATGGTTCATGCTAAGATTGATGAATCTGATTATCCCCATGTTTTGAATAAGATGGAACAAGGACGAATCTATGACATTTCTCATTTCAACACATCCAAGATTCAAGGGAGATATAAAGTCGTCAATCATGAAGTGCAACTACGTTTCAACGAGCTGACAAAATTTGAACCCGTTGAACATGGGGCTCCCCCAATTCCAGAATATTCCTTCCATCTGCTTGAATTCAATCAGCTGGGCCTAAACCCTAAACCGCAAACACTACTTATAGATGTTTATGGCTGTATCAAATCAGTTATCCCAGAACATCAGGTGCTCATAAAAGACACAAACAAGATGGAACCAAAATGTGAAGTCGTTATGGAGAATTTGAGGAGAGAAGATTTGAGAATCACTCTATGGGGCGATGTCGCACGAAAATTCGACTTAGAAACCATTCGAGCGTCACCCTCACCAGTTCTTGCTGTAGTGACCAGTCTCAGAATAACACAATTCCAAGAGCAAATTACAACAACAGCTACAAATCACTCCTGTGTTTTCATAAATCCAGAGATTCAACAAGCACAGGAGTACAGAGCTGAGTTCTCCAGGCCAGGTGATAAAGTAAAGATACTTCCTCCTCCACCCAATCGGCAAACACCAGAACAAGTGAAAGAAAAGACAACAATATCAGTGTCTGAGCTGCATACACTGGATCCAGATTCATACACAAACCAGAGTGTGTGTTGCATTGCTTCTATCCGAAGGTTTTCATTGCACAGTGGTTGGTGGTACAAAGCTTGCGGGACAGGGACCTGTTATAGGCAACTAACAGAAGATAAAGATACTAATGACCTTAAATGTAGCCACCATGGCATACAAATTCCTGTCCCATGGTATAAAGTTCACATGATAATTTATGATCGCAATAATCAAGCTACAGTACTGATTATGGGAAAGGAGGCAGAACAACTATTTGGCATTAGTTGTGCAGACCTGCTGAAGAAAGAACTGTATGGAACAGAACTAATAGTACTGGAAGAAATGCAAAAAACTGCTGATCAAACTTATCTGTTTGAGCTCAAATTCAATATGAACAATGAGTTGTTCGTTAGAAACATCTTCCCAACTCACCAAGCCTCTGCATCGTTAACACAGCAAGAGCCAACTACCACAACACCAGATCGTTTCCTTTATCAAAAGAAGAGAAACATTGAGGGGAGCAGCCGAACAGTTTCCCTTTCAGAATCTGAAAAAAAGCTGAAGAGTGAAGAGCAGATCAAGCATAGAACCACAGTTCTACCCTCATCAACAATGGTTCTGCGAAGCAAAGAACTGTATGAAAAAAAAAAGGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

495

Amino Acids

57.47

Weight (kDa)

7.64

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF223 PF02721 6 - 105 3e-10 Domain of unknown function DUF223
REPA_OB_2 PF16900 135 - 221 2.3e-08 Replication protein A OB domain
Rep_fac-A_C PF08646 304 - 408 1.7e-07 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1131
AciI CCGC 2 cut(s) 401, 930
AclWI GGATC 3 cut(s) 13, 836, 849
AcsI RAATTY 7 cut(s) 46, 311, 371, 514, 566, 1008, 1211
AcuI CTGAAG 2 cut(s) 1148, 1409
AfaI GTAC 4 cut(s) 719, 920, 1071, 1161
AfiI CCNNNNNNNGG 1 cut(s) 948
AjnI CCWGG 2 cut(s) 734, 739
AjuI GAANNNNNNNTTGG 2 cut(s) 1086, 1118
AleI CACNNNNGTG 1 cut(s) 678
AloI GAACNNNNNNTCC 2 cut(s) 138, 170
Alw21I GWGCWC 2 cut(s) 465, 1209
Alw26I GTCTC 2 cut(s) 76, 629
AlwI GGATC 3 cut(s) 13, 836, 849
AlwNI CAGNNNCTG 2 cut(s) 824, 1376
AoxI GGCC 2 cut(s) 385, 737
ApeKI GCWGC 2 cut(s) 829, 1350
ApoI RAATTY 7 cut(s) 46, 311, 371, 514, 566, 1008, 1211
Asp700I GAANNNNTTC 3 cut(s) 582, 895, 1360
AspS9I GGNCC 2 cut(s) 385, 939
AsuHPI GGTGA 5 cut(s) 43, 585, 591, 755, 1250
AvaII GGWCC 1 cut(s) 939
BamHI GGATCC 1 cut(s) 841
BanII GRGCYC 2 cut(s) 337, 1209
BarI GAAGNNNNNNTAC 4 cut(s) 273, 305, 744, 776
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 2 cut(s) 465, 1209
BbvI GCAGC 2 cut(s) 816, 1362
BccI CCATC 4 cut(s) 107, 196, 369, 478
BciT130I CCWGG 2 cut(s) 736, 741
BclI TGATCA 1 cut(s) 1186
BcoDI GTCTC 2 cut(s) 76, 629
BfmI CTRYAG 2 cut(s) 612, 1065
BfuAI ACCTGC 1 cut(s) 1131
BglI GCCNNNNNGGC 1 cut(s) 999
BisI GCNGC 2 cut(s) 830, 1351
BlsI GCNGC 2 cut(s) 831, 1352
BmcAI AGTACT 2 cut(s) 1071, 1161
Bme1390I CCNGG 2 cut(s) 736, 741
Bme18I GGWCC 1 cut(s) 939
BmgT120I GGNCC 2 cut(s) 385, 939
BmiI GGNNCC 4 cut(s) 336, 489, 843, 940
BmrFI CCNGG 2 cut(s) 736, 741
BmsI GCATC 1 cut(s) 1280
BpiI GAAGAC 1 cut(s) 110
BplI GAGNNNNNCTC 2 cut(s) 526, 558
BpmI CTGGAG 1 cut(s) 718
BsaI GGTCTC 1 cut(s) 76
BsaJI CCNNGG 2 cut(s) 997, 1019
BsaXI ACNNNNNCTCC 2 cut(s) 138, 168
Bsc4I CCNNNNNNNGG 1 cut(s) 948
Bse1I ACTGG 4 cut(s) 602, 621, 843, 1167
Bse3DI GCAATG 2 cut(s) 876, 899
BseBI CCWGG 2 cut(s) 736, 741
BseDI CCNNGG 2 cut(s) 997, 1019
BseGI GGATG 1 cut(s) 242
BseLI CCNNNNNNNGG 1 cut(s) 948
BseMI GCAATG 2 cut(s) 876, 899
BseMII CTCAG 4 cut(s) 640, 717, 816, 1473
BseNI ACTGG 4 cut(s) 602, 621, 843, 1167
BseRI GAGGAG 3 cut(s) 159, 535, 756
BseXI GCAGC 2 cut(s) 816, 1362
BseYI CCCAGC 1 cut(s) 382
BsgI GTGCAG 1 cut(s) 1137
BshFI GGCC 2 cut(s) 387, 739
BsiHKAI GWGCWC 2 cut(s) 465, 1209
BslFI GGGAC 3 cut(s) 946, 952, 1001
BslI CCNNNNNNNGG 1 cut(s) 948
BsmAI GTCTC 2 cut(s) 76, 629
BsmFI GGGAC 3 cut(s) 946, 952, 1001
BsnI GGCC 2 cut(s) 387, 739
Bso31I GGTCTC 1 cut(s) 76
Bsp1286I GDGCHC 3 cut(s) 337, 465, 1209
Bsp143I GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
Bsp19I CCATGG 2 cut(s) 997, 1019
BspACI CCGC 2 cut(s) 401, 930
BspANI GGCC 2 cut(s) 387, 739
BspCNI CTCAG 4 cut(s) 639, 718, 817, 1474
BspHI TCATGA 1 cut(s) 277
BspLI GGNNCC 4 cut(s) 336, 489, 843, 940
BspMI ACCTGC 1 cut(s) 1131
BspPI GGATC 3 cut(s) 13, 836, 849
BspQI GCTCTTC 1 cut(s) 1392
BspTNI GGTCTC 1 cut(s) 76
BsrDI GCAATG 2 cut(s) 876, 899
BsrI ACTGG 4 cut(s) 602, 621, 843, 1167
BssECI CCNNGG 2 cut(s) 997, 1019
BssMI GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
BssT1I CCWWGG 2 cut(s) 997, 1019
Bst2UI CCWGG 2 cut(s) 736, 741
Bst4CI ACNGT 6 cut(s) 908, 1069, 1140, 1360, 1423, 1464
Bst6I CTCTTC 3 cut(s) 1325, 1385, 1392
BstC8I GCNNGC 1 cut(s) 928
BstDEI CTNAG 7 cut(s) 29, 162, 574, 626, 726, 825, 1482
BstDSI CCRYGG 2 cut(s) 997, 1019
BstENI CCTNNNNNAGG 1 cut(s) 946
BstF5I GGATG 1 cut(s) 242
BstKTI GATC 6 cut(s) 21, 844, 1051, 1189, 1312, 1407
BstMAI GTCTC 2 cut(s) 76, 629
BstMBI GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
BstMWI GCNNNNNNNGC 2 cut(s) 999, 1408
BstNI CCWGG 2 cut(s) 736, 741
BstSCI CCNGG 2 cut(s) 734, 739
BstSFI CTRYAG 2 cut(s) 612, 1065
BstV1I GCAGC 2 cut(s) 816, 1362
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 1 cut(s) 841
BstYI RGATCY 1 cut(s) 841
BsuRI GGCC 2 cut(s) 387, 739
BtgI CCRYGG 2 cut(s) 997, 1019
BtgZI GCGATG 1 cut(s) 567
BtsCI GGATG 1 cut(s) 242
BtsIMutI CAGTG 4 cut(s) 14, 825, 836, 913
BveI ACCTGC 1 cut(s) 1131
Cac8I GCNNGC 1 cut(s) 928
CaiI CAGNNNCTG 2 cut(s) 824, 1376
CciI TCATGA 1 cut(s) 277
Cfr13I GGNCC 2 cut(s) 385, 939
CseI GACGC 1 cut(s) 579
Csp6I GTAC 4 cut(s) 718, 919, 1070, 1160
CviAII CATG 9 cut(s) 23, 55, 158, 188, 278, 329, 998, 1020, 1036
CviQI GTAC 4 cut(s) 718, 919, 1070, 1160
DdeI CTNAG 7 cut(s) 29, 162, 574, 626, 726, 825, 1482
DpnI GATC 6 cut(s) 20, 843, 1050, 1188, 1311, 1406
DpnII GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
Eam1104I CTCTTC 3 cut(s) 1325, 1385, 1392
EarI CTCTTC 3 cut(s) 1325, 1385, 1392
Ecl136II GAGCTC 1 cut(s) 1207
Eco130I CCWWGG 2 cut(s) 997, 1019
Eco24I GRGCYC 2 cut(s) 337, 1209
Eco31I GGTCTC 1 cut(s) 76
Eco47I GGWCC 1 cut(s) 939
Eco53kI GAGCTC 1 cut(s) 1207
Eco57I CTGAAG 2 cut(s) 1148, 1409
EcoICRI GAGCTC 1 cut(s) 1207
EcoNI CCTNNNNNAGG 1 cut(s) 946
EcoO109I RGGNCCY 1 cut(s) 939
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 2 cut(s) 734, 739
EcoT14I CCWWGG 2 cut(s) 997, 1019
EcoT38I GRGCYC 2 cut(s) 337, 1209
ErhI CCWWGG 2 cut(s) 997, 1019
FaeI CATG 9 cut(s) 26, 58, 161, 191, 281, 332, 1001, 1023, 1039
FaqI GGGAC 3 cut(s) 946, 952, 1001
FatI CATG 9 cut(s) 22, 54, 157, 187, 277, 328, 997, 1019, 1035
FauI CCCGC 1 cut(s) 923
FbaI TGATCA 1 cut(s) 1186
Fnu4HI GCNGC 2 cut(s) 830, 1351
FokI GGATG 1 cut(s) 229
FriOI GRGCYC 2 cut(s) 337, 1209
Fsp4HI GCNGC 2 cut(s) 830, 1351
GluI GCNGC 2 cut(s) 830, 1351
GsaI CCCAGC 1 cut(s) 386
GsuI CTGGAG 1 cut(s) 718
HaeIII GGCC 2 cut(s) 387, 739
HgaI GACGC 1 cut(s) 579
Hin1II CATG 9 cut(s) 26, 58, 161, 191, 281, 332, 1001, 1023, 1039
HincII GTYRAC 1 cut(s) 1278
HindII GTYRAC 1 cut(s) 1278
HindIII AAGCTT 1 cut(s) 924
HinfI GANTC 8 cut(s) 93, 173, 216, 250, 537, 700, 848, 1373
HpaI GTTAAC 1 cut(s) 1278
HphI GGTGA 5 cut(s) 43, 585, 591, 755, 1250
Hpy166II GTNNAC 2 cut(s) 1033, 1278
Hpy188I TCNGA 6 cut(s) 178, 629, 826, 890, 1372, 1378
Hpy188III TCNNGA 4 cut(s) 278, 347, 695, 845
Hpy8I GTNNAC 2 cut(s) 1033, 1278
HpyAV CCTTC 2 cut(s) 367, 885
HpyCH4III ACNGT 6 cut(s) 908, 1069, 1140, 1360, 1423, 1464
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 7 cut(s) 286, 832, 876, 904, 1118, 1174, 1271
HpyF10VI GCNNNNNNNGC 2 cut(s) 999, 1408
HpyF3I CTNAG 7 cut(s) 29, 162, 574, 626, 726, 825, 1482
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 9 cut(s) 26, 58, 161, 191, 281, 332, 1001, 1023, 1039
Ksp22I TGATCA 1 cut(s) 1186
KspAI GTTAAC 1 cut(s) 1278
Kzo9I GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
LguI GCTCTTC 1 cut(s) 1392
LmnI GCTCC 2 cut(s) 340, 1347
Lsp1109I GCAGC 2 cut(s) 816, 1362
LweI GCATC 1 cut(s) 1280
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 2 cut(s) 591, 616
MalI GATC 6 cut(s) 20, 843, 1050, 1188, 1311, 1406
MboI GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
MboII GAAGA 9 cut(s) 110, 539, 974, 1141, 1178, 1240, 1342, 1402, 1409
MflI RGATCY 1 cut(s) 841
MhlI GDGCHC 3 cut(s) 337, 465, 1209
MroXI GAANNNNTTC 3 cut(s) 582, 895, 1360
MseI TTAA 3 cut(s) 131, 984, 1277
MslI CAYNNNNRTG 1 cut(s) 678
MspA1I CMGCKG 2 cut(s) 43, 382
MspR9I CCNGG 2 cut(s) 736, 741
MvaI CCWGG 2 cut(s) 736, 741
MwoI GCNNNNNNNGC 2 cut(s) 999, 1408
NcoI CCATGG 2 cut(s) 997, 1019
NdeII GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
NlaIII CATG 9 cut(s) 26, 58, 161, 191, 281, 332, 1001, 1023, 1039
NlaIV GGNNCC 4 cut(s) 336, 489, 843, 940
NmuCI GTSAC 2 cut(s) 591, 616
OliI CACNNNNGTG 1 cut(s) 678
PagI TCATGA 1 cut(s) 277
PciSI GCTCTTC 1 cut(s) 1392
PdmI GAANNNNTTC 3 cut(s) 582, 895, 1360
PfeI GAWTC 8 cut(s) 93, 173, 216, 250, 537, 700, 848, 1373
PkrI GCNGC 2 cut(s) 831, 1352
PpuMI RGGWCCY 1 cut(s) 939
Psp124BI GAGCTC 1 cut(s) 1209
Psp5II RGGWCCY 1 cut(s) 939
Psp6I CCWGG 2 cut(s) 734, 739
PspFI CCCAGC 1 cut(s) 382
PspGI CCWGG 2 cut(s) 734, 739
PspN4I GGNNCC 4 cut(s) 336, 489, 843, 940
PspPI GGNCC 2 cut(s) 385, 939
PspPPI RGGWCCY 1 cut(s) 939
PsrI GAACNNNNNNTAC 2 cut(s) 1143, 1175
PstNI CAGNNNCTG 2 cut(s) 824, 1376
PsuI RGATCY 1 cut(s) 841
PvuII CAGCTG 2 cut(s) 43, 382
RsaI GTAC 4 cut(s) 719, 920, 1071, 1161
RsaNI GTAC 4 cut(s) 718, 919, 1070, 1160
RseI CAYNNNNRTG 1 cut(s) 678
SacI GAGCTC 1 cut(s) 1209
SapI GCTCTTC 1 cut(s) 1392
SaqAI TTAA 3 cut(s) 131, 984, 1277
SatI GCNGC 2 cut(s) 830, 1351
Sau3AI GATC 6 cut(s) 18, 841, 1048, 1186, 1309, 1404
Sau96I GGNCC 2 cut(s) 385, 939
ScaI AGTACT 2 cut(s) 1071, 1161
ScrFI CCNGG 2 cut(s) 736, 741
SduI GDGCHC 3 cut(s) 337, 465, 1209
SfaNI GCATC 1 cut(s) 1280
SfcI CTRYAG 2 cut(s) 612, 1065
SinI GGWCC 1 cut(s) 939
SmiMI CAYNNNNRTG 1 cut(s) 678
SsiI CCGC 2 cut(s) 401, 930
SspI AATATT 1 cut(s) 353
SstI GAGCTC 1 cut(s) 1209
StyD4I CCNGG 2 cut(s) 734, 739
StyI CCWWGG 2 cut(s) 997, 1019
TaaI ACNGT 6 cut(s) 908, 1069, 1140, 1360, 1423, 1464
TaiI ACGT 1 cut(s) 295
TaqI TCGA 2 cut(s) 570, 586
TatI WGTACW 3 cut(s) 717, 1069, 1159
TfiI GAWTC 8 cut(s) 93, 173, 216, 250, 537, 700, 848, 1373
Tru1I TTAA 3 cut(s) 131, 984, 1277
Tru9I TTAA 3 cut(s) 131, 984, 1277
TscAI CASTG 4 cut(s) 21, 825, 843, 913
TseFI GTSAC 2 cut(s) 591, 616
TseI GCWGC 2 cut(s) 829, 1350
Tsp45I GTSAC 2 cut(s) 591, 616
TspRI CASTG 4 cut(s) 21, 825, 843, 913
VpaK11BI GGWCC 1 cut(s) 939
XagI CCTNNNNNAGG 1 cut(s) 946
XapI RAATTY 7 cut(s) 46, 311, 371, 514, 566, 1008, 1211
XmnI GAANNNNTTC 3 cut(s) 582, 895, 1360
ZrmI AGTACT 2 cut(s) 1071, 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.