DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 508 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 838 |
| AccI | GTMKAC | 1 cut(s) | 417 |
| AclWI | GGATC | 3 cut(s) | 541, 683, 696 |
| AcsI | RAATTY | 2 cut(s) | 258, 287 |
| AfaI | GTAC | 3 cut(s) | 488, 566, 810 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 242, 838 |
| AjnI | CCWGG | 1 cut(s) | 645 |
| AluBI | AGCT | 1 cut(s) | 440 |
| AluI | AGCT | 1 cut(s) | 440 |
| Alw26I | GTCTC | 1 cut(s) | 116 |
| AlwI | GGATC | 3 cut(s) | 541, 683, 696 |
| ApeKI | GCWGC | 1 cut(s) | 571 |
| ApoI | RAATTY | 2 cut(s) | 258, 287 |
| AseI | ATTAAT | 1 cut(s) | 360 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 439 |
| AsuHPI | GGTGA | 1 cut(s) | 152 |
| BamHI | GGATCC | 1 cut(s) | 688 |
| BbsI | GAAGAC | 1 cut(s) | 728 |
| BbvI | GCAGC | 1 cut(s) | 558 |
| BccI | CCATC | 3 cut(s) | 101, 451, 514 |
| BciT130I | CCWGG | 1 cut(s) | 647 |
| BclI | TGATCA | 3 cut(s) | 190, 292, 316 |
| BcoDI | GTCTC | 1 cut(s) | 116 |
| BfaI | CTAG | 2 cut(s) | 408, 862 |
| BfmI | CTRYAG | 1 cut(s) | 572 |
| BfuAI | ACCTGC | 1 cut(s) | 508 |
| BisI | GCNGC | 1 cut(s) | 572 |
| BlsI | GCNGC | 1 cut(s) | 573 |
| BmcAI | AGTACT | 1 cut(s) | 488 |
| Bme1390I | CCNGG | 1 cut(s) | 647 |
| BmiI | GGNNCC | 2 cut(s) | 27, 690 |
| BmrFI | CCNGG | 1 cut(s) | 647 |
| BmsI | GCATC | 3 cut(s) | 277, 729, 840 |
| BpiI | GAAGAC | 1 cut(s) | 728 |
| BpuEI | CTTGAG | 1 cut(s) | 400 |
| Bsa29I | ATCGAT | 1 cut(s) | 271 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 242, 838 |
| Bse1I | ACTGG | 4 cut(s) | 236, 449, 468, 591 |
| Bse3DI | GCAATG | 1 cut(s) | 725 |
| BseBI | CCWGG | 1 cut(s) | 647 |
| BseCI | ATCGAT | 1 cut(s) | 271 |
| BseGI | GGATG | 2 cut(s) | 10, 744 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 242, 838 |
| BseMI | GCAATG | 1 cut(s) | 725 |
| BseNI | ACTGG | 4 cut(s) | 236, 449, 468, 591 |
| BseXI | GCAGC | 1 cut(s) | 558 |
| BshVI | ATCGAT | 1 cut(s) | 271 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 242, 838 |
| BsmAI | GTCTC | 1 cut(s) | 116 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| Bsp1407I | TGTACA | 1 cut(s) | 808 |
| Bsp143I | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| BspDI | ATCGAT | 1 cut(s) | 271 |
| BspHI | TCATGA | 1 cut(s) | 16 |
| BspLI | GGNNCC | 2 cut(s) | 27, 690 |
| BspMAI | CTGCAG | 1 cut(s) | 576 |
| BspMI | ACCTGC | 1 cut(s) | 508 |
| BspPI | GGATC | 3 cut(s) | 541, 683, 696 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrDI | GCAATG | 1 cut(s) | 725 |
| BsrGI | TGTACA | 1 cut(s) | 808 |
| BsrI | ACTGG | 4 cut(s) | 236, 449, 468, 591 |
| BssMI | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| Bst2UI | CCWGG | 1 cut(s) | 647 |
| Bst4CI | ACNGT | 3 cut(s) | 226, 667, 813 |
| Bst6I | CTCTTC | 1 cut(s) | 364 |
| BstAUI | TGTACA | 1 cut(s) | 808 |
| BstC8I | GCNNGC | 1 cut(s) | 307 |
| BstF5I | GGATG | 2 cut(s) | 10, 744 |
| BstKTI | GATC | 6 cut(s) | 51, 193, 295, 319, 549, 691 |
| BstMAI | GTCTC | 1 cut(s) | 116 |
| BstMBI | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| BstNI | CCWGG | 1 cut(s) | 647 |
| BstSCI | CCNGG | 1 cut(s) | 645 |
| BstSFI | CTRYAG | 1 cut(s) | 572 |
| BstV1I | GCAGC | 1 cut(s) | 558 |
| BstV2I | GAAGAC | 1 cut(s) | 728 |
| BstX2I | RGATCY | 2 cut(s) | 546, 688 |
| BstYI | RGATCY | 2 cut(s) | 546, 688 |
| Bsu15I | ATCGAT | 1 cut(s) | 271 |
| BsuTUI | ATCGAT | 1 cut(s) | 271 |
| BtsCI | GGATG | 2 cut(s) | 10, 744 |
| BtsI | GCAGTG | 1 cut(s) | 402 |
| BtsIMutI | CAGTG | 4 cut(s) | 218, 402, 456, 672 |
| BveI | ACCTGC | 1 cut(s) | 508 |
| Cac8I | GCNNGC | 1 cut(s) | 307 |
| CciI | TCATGA | 1 cut(s) | 16 |
| ClaI | ATCGAT | 1 cut(s) | 271 |
| CseI | GACGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 3 cut(s) | 487, 565, 809 |
| CviAII | CATG | 5 cut(s) | 17, 160, 310, 421, 833 |
| CviJI | RGCY | 4 cut(s) | 345, 440, 571, 628 |
| CviKI_1 | RGCY | 4 cut(s) | 345, 440, 571, 628 |
| CviQI | GTAC | 3 cut(s) | 487, 565, 809 |
| DpnI | GATC | 6 cut(s) | 50, 192, 294, 318, 548, 690 |
| DpnII | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| DraI | TTTAAA | 1 cut(s) | 474 |
| Eam1104I | CTCTTC | 1 cut(s) | 364 |
| EarI | CTCTTC | 1 cut(s) | 364 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 645 |
| FaeI | CATG | 5 cut(s) | 20, 163, 313, 424, 836 |
| FatI | CATG | 5 cut(s) | 16, 159, 309, 420, 832 |
| FbaI | TGATCA | 3 cut(s) | 190, 292, 316 |
| FblI | GTMKAC | 1 cut(s) | 417 |
| Fnu4HI | GCNGC | 1 cut(s) | 572 |
| FokI | GGATG | 2 cut(s) | 17, 751 |
| Fsp4HI | GCNGC | 1 cut(s) | 572 |
| FspBI | CTAG | 2 cut(s) | 408, 862 |
| GluI | GCNGC | 1 cut(s) | 572 |
| HgaI | GACGC | 1 cut(s) | 152 |
| Hin1II | CATG | 5 cut(s) | 20, 163, 313, 424, 836 |
| HincII | GTYRAC | 2 cut(s) | 418, 781 |
| HindII | GTYRAC | 2 cut(s) | 418, 781 |
| HindIII | AAGCTT | 1 cut(s) | 438 |
| HinfI | GANTC | 4 cut(s) | 184, 199, 273, 670 |
| HphI | GGTGA | 1 cut(s) | 152 |
| Hpy166II | GTNNAC | 2 cut(s) | 418, 781 |
| Hpy188I | TCNGA | 5 cut(s) | 40, 53, 172, 198, 637 |
| Hpy188III | TCNNGA | 5 cut(s) | 17, 66, 124, 188, 263 |
| Hpy8I | GTNNAC | 2 cut(s) | 418, 781 |
| HpyAV | CCTTC | 1 cut(s) | 236 |
| HpyCH4III | ACNGT | 3 cut(s) | 226, 667, 813 |
| HpyCH4V | TGCA | 6 cut(s) | 163, 218, 574, 601, 742, 853 |
| Hsp92II | CATG | 5 cut(s) | 20, 163, 313, 424, 836 |
| Ksp22I | TGATCA | 3 cut(s) | 190, 292, 316 |
| Kzo9I | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| Lsp1109I | GCAGC | 1 cut(s) | 558 |
| LweI | GCATC | 3 cut(s) | 277, 729, 840 |
| MaeI | CTAG | 2 cut(s) | 408, 862 |
| MaeIII | GTNAC | 2 cut(s) | 140, 667 |
| MalI | GATC | 6 cut(s) | 50, 192, 294, 318, 548, 690 |
| MboI | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| MboII | GAAGA | 3 cut(s) | 381, 650, 733 |
| MflI | RGATCY | 2 cut(s) | 546, 688 |
| MluCI | AATT | 8 cut(s) | 152, 164, 258, 287, 324, 361, 384, 429 |
| MlyI | GAGTC | 2 cut(s) | 208, 664 |
| MmeI | TCCRAC | 2 cut(s) | 635, 716 |
| MnlI | CCTC | 1 cut(s) | 367 |
| MroXI | GAANNNNTTC | 1 cut(s) | 439 |
| MseI | TTAA | 4 cut(s) | 360, 365, 464, 473 |
| MspR9I | CCNGG | 1 cut(s) | 647 |
| MvaI | CCWGG | 1 cut(s) | 647 |
| NdeII | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| NlaIII | CATG | 5 cut(s) | 20, 163, 313, 424, 836 |
| NlaIV | GGNNCC | 2 cut(s) | 27, 690 |
| NmuCI | GTSAC | 2 cut(s) | 140, 667 |
| PagI | TCATGA | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 439 |
| PfeI | GAWTC | 2 cut(s) | 184, 273 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 838 |
| PfoI | TCCNGGA | 1 cut(s) | 645 |
| PkrI | GCNGC | 1 cut(s) | 573 |
| PleI | GAGTC | 2 cut(s) | 207, 664 |
| PpsI | GAGTC | 2 cut(s) | 207, 664 |
| PshBI | ATTAAT | 1 cut(s) | 360 |
| Psp6I | CCWGG | 1 cut(s) | 645 |
| PspGI | CCWGG | 1 cut(s) | 645 |
| PspN4I | GGNNCC | 2 cut(s) | 27, 690 |
| PstI | CTGCAG | 1 cut(s) | 576 |
| PsuI | RGATCY | 2 cut(s) | 546, 688 |
| RsaI | GTAC | 3 cut(s) | 488, 566, 810 |
| RsaNI | GTAC | 3 cut(s) | 487, 565, 809 |
| SalI | GTCGAC | 1 cut(s) | 416 |
| SaqAI | TTAA | 4 cut(s) | 360, 365, 464, 473 |
| SatI | GCNGC | 1 cut(s) | 572 |
| Sau3AI | GATC | 6 cut(s) | 48, 190, 292, 316, 546, 688 |
| ScaI | AGTACT | 1 cut(s) | 488 |
| SchI | GAGTC | 2 cut(s) | 208, 664 |
| ScrFI | CCNGG | 1 cut(s) | 647 |
| SetI | ASST | 5 cut(s) | 31, 442, 502, 527, 761 |
| SfaNI | GCATC | 3 cut(s) | 277, 729, 840 |
| SfcI | CTRYAG | 1 cut(s) | 572 |
| SmlI | CTYRAG | 1 cut(s) | 379 |
| SmoI | CTYRAG | 1 cut(s) | 379 |
| Sse9I | AATT | 8 cut(s) | 152, 164, 258, 287, 324, 361, 384, 429 |
| SspMI | CTAG | 2 cut(s) | 408, 862 |
| StyD4I | CCNGG | 1 cut(s) | 645 |
| TaaI | ACNGT | 3 cut(s) | 226, 667, 813 |
| TaqI | TCGA | 6 cut(s) | 65, 271, 300, 356, 417, 673 |
| TasI | AATT | 8 cut(s) | 152, 164, 258, 287, 324, 361, 384, 429 |
| TatI | WGTACW | 3 cut(s) | 486, 564, 808 |
| TfiI | GAWTC | 2 cut(s) | 184, 273 |
| Tru1I | TTAA | 4 cut(s) | 360, 365, 464, 473 |
| Tru9I | TTAA | 4 cut(s) | 360, 365, 464, 473 |
| TscAI | CASTG | 4 cut(s) | 225, 409, 456, 672 |
| TseFI | GTSAC | 2 cut(s) | 140, 667 |
| TseI | GCWGC | 1 cut(s) | 571 |
| Tsp45I | GTSAC | 2 cut(s) | 140, 667 |
| TspDTI | ATGAA | 8 cut(s) | 5, 33, 147, 148, 326, 523, 674, 704 |
| TspGWI | ACGGA | 1 cut(s) | 197 |
| TspRI | CASTG | 4 cut(s) | 225, 409, 456, 672 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 838 |
| VspI | ATTAAT | 1 cut(s) | 360 |
| XapI | RAATTY | 2 cut(s) | 258, 287 |
| XmiI | GTMKAC | 1 cut(s) | 417 |
| XmnI | GAANNNNTTC | 1 cut(s) | 439 |
| XspI | CTAG | 2 cut(s) | 408, 862 |
| ZrmI | AGTACT | 1 cut(s) | 488 |