DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 203 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 197, 476 |
| Acc36I | ACCTGC | 1 cut(s) | 203 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 390 |
| AciI | CCGC | 2 cut(s) | 354, 415 |
| AclWI | GGATC | 1 cut(s) | 203 |
| AcsI | RAATTY | 4 cut(s) | 99, 155, 245, 283 |
| AdeI | CACNNNGTG | 1 cut(s) | 63 |
| AfaI | GTAC | 4 cut(s) | 376, 395, 422, 460 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 118, 390 |
| AgeI | ACCGGT | 1 cut(s) | 118 |
| AgsI | TTSAA | 3 cut(s) | 104, 476, 515 |
| AluBI | AGCT | 3 cut(s) | 141, 268, 499 |
| AluI | AGCT | 3 cut(s) | 141, 268, 499 |
| Alw26I | GTCTC | 1 cut(s) | 139 |
| AlwI | GGATC | 1 cut(s) | 203 |
| ApoI | RAATTY | 4 cut(s) | 99, 155, 245, 283 |
| AsiGI | ACCGGT | 1 cut(s) | 118 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 99, 245 |
| AsuC2I | CCSGG | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 2 cut(s) | 163, 272 |
| BbsI | GAAGAC | 1 cut(s) | 444 |
| BccI | CCATC | 1 cut(s) | 184 |
| BcnI | CCSGG | 1 cut(s) | 258 |
| BcoDI | GTCTC | 1 cut(s) | 139 |
| BfaI | CTAG | 1 cut(s) | 92 |
| BfuAI | ACCTGC | 1 cut(s) | 203 |
| BglII | AGATCT | 2 cut(s) | 46, 342 |
| BisI | GCNGC | 2 cut(s) | 354, 415 |
| BlsI | GCNGC | 2 cut(s) | 355, 416 |
| Bme1390I | CCNGG | 1 cut(s) | 258 |
| BmrFI | CCNGG | 1 cut(s) | 258 |
| BpiI | GAAGAC | 1 cut(s) | 444 |
| BpuEI | CTTGAG | 1 cut(s) | 163 |
| BpuMI | CCSGG | 1 cut(s) | 258 |
| BsaWI | WCCGGW | 1 cut(s) | 118 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 118, 390 |
| Bse118I | RCCGGY | 1 cut(s) | 118 |
| Bse1I | ACTGG | 1 cut(s) | 30 |
| BseGI | GGATG | 1 cut(s) | 407 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 118, 390 |
| BseMII | CTCAG | 1 cut(s) | 41 |
| BseNI | ACTGG | 1 cut(s) | 30 |
| BshTI | ACCGGT | 1 cut(s) | 118 |
| BsiSI | CCGG | 2 cut(s) | 119, 257 |
| BslFI | GGGAC | 2 cut(s) | 390, 464 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 118, 390 |
| BsmAI | GTCTC | 1 cut(s) | 139 |
| BsmFI | GGGAC | 2 cut(s) | 390, 464 |
| Bsp143I | GATC | 4 cut(s) | 46, 88, 208, 342 |
| BspACI | CCGC | 2 cut(s) | 354, 415 |
| BspCNI | CTCAG | 1 cut(s) | 42 |
| BspMI | ACCTGC | 1 cut(s) | 203 |
| BspPI | GGATC | 1 cut(s) | 203 |
| BsrFI | RCCGGY | 1 cut(s) | 118 |
| BsrI | ACTGG | 1 cut(s) | 30 |
| BssAI | RCCGGY | 1 cut(s) | 118 |
| BssMI | GATC | 4 cut(s) | 46, 88, 208, 342 |
| Bst4CI | ACNGT | 1 cut(s) | 538 |
| Bst6I | CTCTTC | 2 cut(s) | 303, 489 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstF5I | GGATG | 1 cut(s) | 407 |
| BstKTI | GATC | 4 cut(s) | 49, 91, 211, 345 |
| BstMAI | GTCTC | 1 cut(s) | 139 |
| BstMBI | GATC | 4 cut(s) | 46, 88, 208, 342 |
| BstSCI | CCNGG | 1 cut(s) | 256 |
| BstV2I | GAAGAC | 1 cut(s) | 444 |
| BstX2I | RGATCY | 3 cut(s) | 46, 208, 342 |
| BstYI | RGATCY | 3 cut(s) | 46, 208, 342 |
| BtsCI | GGATG | 1 cut(s) | 407 |
| BveI | ACCTGC | 1 cut(s) | 203 |
| Cfr10I | RCCGGY | 1 cut(s) | 118 |
| CseI | GACGC | 2 cut(s) | 90, 187 |
| Csp6I | GTAC | 4 cut(s) | 375, 394, 421, 459 |
| CspAI | ACCGGT | 1 cut(s) | 118 |
| CviAII | CATG | 3 cut(s) | 467, 489, 505 |
| CviJI | RGCY | 3 cut(s) | 141, 268, 499 |
| CviKI_1 | RGCY | 3 cut(s) | 141, 268, 499 |
| CviQI | GTAC | 4 cut(s) | 375, 394, 421, 459 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 4 cut(s) | 48, 90, 210, 344 |
| DpnII | GATC | 4 cut(s) | 46, 88, 208, 342 |
| DraIII | CACNNNGTG | 1 cut(s) | 63 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 197, 476 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 197, 476 |
| Eam1104I | CTCTTC | 2 cut(s) | 303, 489 |
| EarI | CTCTTC | 2 cut(s) | 303, 489 |
| EcoRI | GAATTC | 3 cut(s) | 99, 155, 245 |
| FaeI | CATG | 3 cut(s) | 470, 492, 508 |
| FaiI | YATR | 7 cut(s) | 23, 62, 206, 381, 468, 490, 506 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 468, 500 |
| FaqI | GGGAC | 2 cut(s) | 390, 464 |
| FatI | CATG | 3 cut(s) | 466, 488, 504 |
| Fnu4HI | GCNGC | 2 cut(s) | 354, 415 |
| FokI | GGATG | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 2 cut(s) | 354, 415 |
| FspBI | CTAG | 1 cut(s) | 92 |
| GluI | GCNGC | 2 cut(s) | 354, 415 |
| HapII | CCGG | 2 cut(s) | 119, 257 |
| HgaI | GACGC | 2 cut(s) | 90, 187 |
| Hin1II | CATG | 3 cut(s) | 470, 492, 508 |
| HindIII | AAGCTT | 2 cut(s) | 139, 497 |
| HinfI | GANTC | 4 cut(s) | 5, 54, 168, 277 |
| HpaII | CCGG | 2 cut(s) | 119, 257 |
| HphI | GGTGA | 2 cut(s) | 163, 272 |
| Hpy166II | GTNNAC | 2 cut(s) | 135, 377 |
| Hpy188I | TCNGA | 2 cut(s) | 16, 51 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 212, 291 |
| Hpy8I | GTNNAC | 2 cut(s) | 135, 377 |
| HpyAV | CCTTC | 2 cut(s) | 89, 554 |
| HpyCH4III | ACNGT | 1 cut(s) | 538 |
| HpyCH4V | TGCA | 1 cut(s) | 77 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| Hsp92II | CATG | 3 cut(s) | 470, 492, 508 |
| Kzo9I | GATC | 4 cut(s) | 46, 88, 208, 342 |
| LpnPI | CCDG | 5 cut(s) | 11, 132, 208, 225, 270 |
| MaeI | CTAG | 1 cut(s) | 92 |
| MaeIII | GTNAC | 2 cut(s) | 260, 491 |
| MalI | GATC | 4 cut(s) | 48, 90, 210, 344 |
| MboI | GATC | 4 cut(s) | 46, 88, 208, 342 |
| MboII | GAAGA | 6 cut(s) | 317, 320, 352, 449, 476, 527 |
| MfeI | CAATTG | 2 cut(s) | 385, 510 |
| MflI | RGATCY | 3 cut(s) | 46, 208, 342 |
| MluCI | AATT | 6 cut(s) | 99, 155, 245, 283, 385, 510 |
| MnlI | CCTC | 3 cut(s) | 123, 304, 492 |
| MroXI | GAANNNNTTC | 2 cut(s) | 99, 245 |
| MspI | CCGG | 2 cut(s) | 119, 257 |
| MspR9I | CCNGG | 1 cut(s) | 258 |
| MunI | CAATTG | 2 cut(s) | 385, 510 |
| NciI | CCSGG | 1 cut(s) | 258 |
| NdeII | GATC | 4 cut(s) | 46, 88, 208, 342 |
| NlaIII | CATG | 3 cut(s) | 470, 492, 508 |
| NmuCI | GTSAC | 1 cut(s) | 260 |
| PaqCI | CACCTGC | 1 cut(s) | 203 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 195 |
| PdmI | GAANNNNTTC | 2 cut(s) | 99, 245 |
| PfeI | GAWTC | 4 cut(s) | 5, 54, 168, 277 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 390 |
| PinAI | ACCGGT | 1 cut(s) | 118 |
| PkrI | GCNGC | 2 cut(s) | 355, 416 |
| PsuI | RGATCY | 3 cut(s) | 46, 208, 342 |
| RsaI | GTAC | 4 cut(s) | 376, 395, 422, 460 |
| RsaNI | GTAC | 4 cut(s) | 375, 394, 421, 459 |
| SatI | GCNGC | 2 cut(s) | 354, 415 |
| Sau3AI | GATC | 4 cut(s) | 46, 88, 208, 342 |
| ScrFI | CCNGG | 1 cut(s) | 258 |
| SetI | ASST | 5 cut(s) | 143, 197, 270, 426, 501 |
| SgrAI | CRCCGGYG | 1 cut(s) | 118 |
| SmlI | CTYRAG | 1 cut(s) | 142 |
| SmoI | CTYRAG | 1 cut(s) | 142 |
| Sse9I | AATT | 6 cut(s) | 99, 155, 245, 283, 385, 510 |
| SsiI | CCGC | 2 cut(s) | 354, 415 |
| SspMI | CTAG | 1 cut(s) | 92 |
| StyD4I | CCNGG | 1 cut(s) | 256 |
| TaaI | ACNGT | 1 cut(s) | 538 |
| TasI | AATT | 6 cut(s) | 99, 155, 245, 283, 385, 510 |
| TauI | GCSGC | 2 cut(s) | 356, 417 |
| TfiI | GAWTC | 4 cut(s) | 5, 54, 168, 277 |
| TseFI | GTSAC | 1 cut(s) | 260 |
| Tsp45I | GTSAC | 1 cut(s) | 260 |
| TspDTI | ATGAA | 1 cut(s) | 442 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 390 |
| XapI | RAATTY | 4 cut(s) | 99, 155, 245, 283 |
| XbaI | TCTAGA | 1 cut(s) | 91 |
| XmnI | GAANNNNTTC | 2 cut(s) | 99, 245 |
| XspI | CTAG | 1 cut(s) | 92 |