DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 47 |
| AgsI | TTSAA | 1 cut(s) | 273 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 153, 185 |
| AluBI | AGCT | 4 cut(s) | 10, 23, 80, 180 |
| AluI | AGCT | 4 cut(s) | 10, 23, 80, 180 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 180 |
| AoxI | GGCC | 1 cut(s) | 253 |
| ApeKI | GCWGC | 4 cut(s) | 61, 131, 174, 177 |
| ApoI | RAATTY | 1 cut(s) | 47 |
| AsuHPI | GGTGA | 1 cut(s) | 205 |
| BbsI | GAAGAC | 1 cut(s) | 157 |
| BbvI | GCAGC | 4 cut(s) | 73, 143, 186, 189 |
| BccI | CCATC | 2 cut(s) | 139, 285 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 31, 65 |
| BisI | GCNGC | 4 cut(s) | 62, 132, 175, 178 |
| BlsI | GCNGC | 4 cut(s) | 63, 133, 176, 179 |
| BmsI | GCATC | 1 cut(s) | 106 |
| BpiI | GAAGAC | 1 cut(s) | 157 |
| Bse3DI | GCAATG | 1 cut(s) | 49 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseMI | GCAATG | 1 cut(s) | 49 |
| BseXI | GCAGC | 4 cut(s) | 73, 143, 186, 189 |
| BsgI | GTGCAG | 1 cut(s) | 80 |
| BshFI | GGCC | 1 cut(s) | 255 |
| BsnI | GGCC | 1 cut(s) | 255 |
| Bsp143I | GATC | 1 cut(s) | 203 |
| BspANI | GGCC | 1 cut(s) | 255 |
| BspQI | GCTCTTC | 1 cut(s) | 87 |
| BsrDI | GCAATG | 1 cut(s) | 49 |
| BssMI | GATC | 1 cut(s) | 203 |
| Bst6I | CTCTTC | 2 cut(s) | 87, 228 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstKTI | GATC | 1 cut(s) | 206 |
| BstMBI | GATC | 1 cut(s) | 203 |
| BstV1I | GCAGC | 4 cut(s) | 73, 143, 186, 189 |
| BstV2I | GAAGAC | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 255 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| BtsI | GCAGTG | 1 cut(s) | 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 224 |
| CaiI | CAGNNNCTG | 1 cut(s) | 180 |
| CviAII | CATG | 1 cut(s) | 65 |
| CviJI | RGCY | 5 cut(s) | 10, 23, 80, 180, 255 |
| CviKI_1 | RGCY | 5 cut(s) | 10, 23, 80, 180, 255 |
| DpnI | GATC | 1 cut(s) | 205 |
| DpnII | GATC | 1 cut(s) | 203 |
| Eam1104I | CTCTTC | 2 cut(s) | 87, 228 |
| EarI | CTCTTC | 2 cut(s) | 87, 228 |
| EcoRI | GAATTC | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 68 |
| FaiI | YATR | 6 cut(s) | 66, 71, 102, 104, 140, 208 |
| FatI | CATG | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 4 cut(s) | 62, 132, 175, 178 |
| FokI | GGATG | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 4 cut(s) | 62, 132, 175, 178 |
| GluI | GCNGC | 4 cut(s) | 62, 132, 175, 178 |
| HaeIII | GGCC | 1 cut(s) | 255 |
| Hin1II | CATG | 1 cut(s) | 68 |
| HinfI | GANTC | 2 cut(s) | 96, 284 |
| HphI | GGTGA | 1 cut(s) | 205 |
| Hpy166II | GTNNAC | 1 cut(s) | 196 |
| Hpy188III | TCNNGA | 2 cut(s) | 185, 288 |
| Hpy8I | GTNNAC | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 1 cut(s) | 61 |
| HpySE526I | ACGT | 1 cut(s) | 88 |
| Hsp92II | CATG | 1 cut(s) | 68 |
| Kzo9I | GATC | 1 cut(s) | 203 |
| LguI | GCTCTTC | 1 cut(s) | 87 |
| LpnPI | CCDG | 2 cut(s) | 243, 269 |
| Lsp1109I | GCAGC | 4 cut(s) | 73, 143, 186, 189 |
| LweI | GCATC | 1 cut(s) | 106 |
| MaeII | ACGT | 1 cut(s) | 88 |
| MaeIII | GTNAC | 2 cut(s) | 12, 89 |
| MalI | GATC | 1 cut(s) | 205 |
| MboI | GATC | 1 cut(s) | 203 |
| MboII | GAAGA | 3 cut(s) | 74, 162, 245 |
| MluCI | AATT | 2 cut(s) | 47, 164 |
| MlyI | GAGTC | 1 cut(s) | 105 |
| MmeI | TCCRAC | 1 cut(s) | 236 |
| MnlI | CCTC | 1 cut(s) | 229 |
| MspA1I | CMGCKG | 1 cut(s) | 180 |
| NdeII | GATC | 1 cut(s) | 203 |
| NlaIII | CATG | 1 cut(s) | 68 |
| PciSI | GCTCTTC | 1 cut(s) | 87 |
| PfeI | GAWTC | 1 cut(s) | 284 |
| PkrI | GCNGC | 4 cut(s) | 63, 133, 176, 179 |
| PleI | GAGTC | 1 cut(s) | 104 |
| PpsI | GAGTC | 1 cut(s) | 104 |
| PstNI | CAGNNNCTG | 1 cut(s) | 180 |
| PvuII | CAGCTG | 1 cut(s) | 180 |
| SapI | GCTCTTC | 1 cut(s) | 87 |
| SatI | GCNGC | 4 cut(s) | 62, 132, 175, 178 |
| Sau3AI | GATC | 1 cut(s) | 203 |
| SchI | GAGTC | 1 cut(s) | 105 |
| SetI | ASST | 7 cut(s) | 12, 25, 82, 91, 182, 240, 268 |
| SfaNI | GCATC | 1 cut(s) | 106 |
| Sse9I | AATT | 2 cut(s) | 47, 164 |
| TaiI | ACGT | 1 cut(s) | 91 |
| TaqI | TCGA | 1 cut(s) | 289 |
| TasI | AATT | 2 cut(s) | 47, 164 |
| TfiI | GAWTC | 1 cut(s) | 284 |
| TscAI | CASTG | 1 cut(s) | 231 |
| TseI | GCWGC | 4 cut(s) | 61, 131, 174, 177 |
| TspDTI | ATGAA | 1 cut(s) | 60 |
| TspRI | CASTG | 1 cut(s) | 231 |
| XapI | RAATTY | 1 cut(s) | 47 |