DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 137 |
| Acc36I | ACCTGC | 1 cut(s) | 141 |
| AclWI | GGATC | 1 cut(s) | 197 |
| AfaI | GTAC | 2 cut(s) | 41, 80 |
| AflIII | ACRYGT | 1 cut(s) | 61 |
| AgsI | TTSAA | 2 cut(s) | 200, 248 |
| AjnI | CCWGG | 1 cut(s) | 42 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 240, 272 |
| AluBI | AGCT | 2 cut(s) | 229, 339 |
| AluI | AGCT | 2 cut(s) | 229, 339 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| AlwI | GGATC | 1 cut(s) | 197 |
| AsuHPI | GGTGA | 1 cut(s) | 26 |
| BciT130I | CCWGG | 1 cut(s) | 44 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfaI | CTAG | 1 cut(s) | 146 |
| BfuAI | ACCTGC | 1 cut(s) | 141 |
| Bme1390I | CCNGG | 1 cut(s) | 44 |
| BmrFI | CCNGG | 1 cut(s) | 44 |
| BmsI | GCATC | 1 cut(s) | 77 |
| BsaI | GGTCTC | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| Bse1I | ACTGG | 1 cut(s) | 242 |
| BseBI | CCWGG | 1 cut(s) | 44 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseGI | GGATG | 2 cut(s) | 92, 341 |
| BseNI | ACTGG | 1 cut(s) | 242 |
| BsgI | GTGCAG | 1 cut(s) | 137 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| Bso31I | GGTCTC | 1 cut(s) | 267 |
| Bsp143I | GATC | 3 cut(s) | 16, 68, 202 |
| BspMI | ACCTGC | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 197 |
| BspTNI | GGTCTC | 1 cut(s) | 267 |
| BsrI | ACTGG | 1 cut(s) | 242 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 3 cut(s) | 16, 68, 202 |
| Bst2UI | CCWGG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 3 cut(s) | 115, 212, 287 |
| Bst6I | CTCTTC | 1 cut(s) | 174 |
| BstC8I | GCNNGC | 2 cut(s) | 158, 329 |
| BstDEI | CTNAG | 1 cut(s) | 230 |
| BstF5I | GGATG | 2 cut(s) | 92, 341 |
| BstKTI | GATC | 3 cut(s) | 19, 71, 205 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMBI | GATC | 3 cut(s) | 16, 68, 202 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 96 |
| BstNI | CCWGG | 1 cut(s) | 44 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 42 |
| BstX2I | RGATCY | 1 cut(s) | 202 |
| BstYI | RGATCY | 1 cut(s) | 202 |
| BtsCI | GGATG | 2 cut(s) | 92, 341 |
| BtsIMutI | CAGTG | 2 cut(s) | 217, 292 |
| BveI | ACCTGC | 1 cut(s) | 141 |
| Cac8I | GCNNGC | 2 cut(s) | 158, 329 |
| Csp6I | GTAC | 2 cut(s) | 40, 79 |
| CviAII | CATG | 3 cut(s) | 157, 174, 188 |
| CviJI | RGCY | 3 cut(s) | 218, 229, 339 |
| CviKI_1 | RGCY | 3 cut(s) | 218, 229, 339 |
| CviQI | GTAC | 2 cut(s) | 40, 79 |
| DdeI | CTNAG | 1 cut(s) | 230 |
| DpnI | GATC | 3 cut(s) | 18, 70, 204 |
| DpnII | GATC | 3 cut(s) | 16, 68, 202 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 137 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 137 |
| Eam1104I | CTCTTC | 1 cut(s) | 174 |
| EarI | CTCTTC | 1 cut(s) | 174 |
| Eco31I | GGTCTC | 1 cut(s) | 267 |
| EcoRII | CCWGG | 1 cut(s) | 42 |
| FaeI | CATG | 3 cut(s) | 160, 177, 191 |
| FaiI | YATR | 6 cut(s) | 158, 175, 180, 189, 281, 352 |
| FatI | CATG | 3 cut(s) | 156, 173, 187 |
| FokI | GGATG | 2 cut(s) | 99, 328 |
| FspBI | CTAG | 1 cut(s) | 146 |
| Hin1II | CATG | 3 cut(s) | 160, 177, 191 |
| HindIII | AAGCTT | 1 cut(s) | 227 |
| HinfI | GANTC | 2 cut(s) | 183, 314 |
| HphI | GGTGA | 1 cut(s) | 26 |
| Hpy188III | TCNNGA | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 3 cut(s) | 115, 212, 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 61 |
| HpyCH4V | TGCA | 4 cut(s) | 118, 136, 160, 270 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 96 |
| HpyF3I | CTNAG | 1 cut(s) | 230 |
| HpySE526I | ACGT | 1 cut(s) | 61 |
| Hsp92II | CATG | 3 cut(s) | 160, 177, 191 |
| Kzo9I | GATC | 3 cut(s) | 16, 68, 202 |
| LpnPI | CCDG | 7 cut(s) | 29, 56, 61, 146, 255, 341, 349 |
| LweI | GCATC | 1 cut(s) | 77 |
| MaeI | CTAG | 1 cut(s) | 146 |
| MaeII | ACGT | 1 cut(s) | 61 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 3 cut(s) | 18, 70, 204 |
| MboI | GATC | 3 cut(s) | 16, 68, 202 |
| MboII | GAAGA | 3 cut(s) | 65, 161, 212 |
| MfeI | CAATTG | 1 cut(s) | 251 |
| MflI | RGATCY | 1 cut(s) | 202 |
| MluCI | AATT | 1 cut(s) | 251 |
| MlyI | GAGTC | 1 cut(s) | 192 |
| MnlI | CCTC | 4 cut(s) | 76, 177, 227, 287 |
| MspR9I | CCNGG | 1 cut(s) | 44 |
| MunI | CAATTG | 1 cut(s) | 251 |
| MvaI | CCWGG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 96 |
| NdeII | GATC | 3 cut(s) | 16, 68, 202 |
| NlaIII | CATG | 3 cut(s) | 160, 177, 191 |
| NmuCI | GTSAC | 1 cut(s) | 128 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PaeI | GCATGC | 1 cut(s) | 160 |
| PfeI | GAWTC | 1 cut(s) | 314 |
| PleI | GAGTC | 1 cut(s) | 191 |
| PpsI | GAGTC | 1 cut(s) | 191 |
| Psp6I | CCWGG | 1 cut(s) | 42 |
| PspGI | CCWGG | 1 cut(s) | 42 |
| PsuI | RGATCY | 1 cut(s) | 202 |
| RsaI | GTAC | 2 cut(s) | 41, 80 |
| RsaNI | GTAC | 2 cut(s) | 40, 79 |
| Sau3AI | GATC | 3 cut(s) | 16, 68, 202 |
| SchI | GAGTC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 44 |
| SetI | ASST | 9 cut(s) | 45, 64, 80, 135, 169, 231, 279, 296, 341 |
| SfaNI | GCATC | 1 cut(s) | 77 |
| SphI | GCATGC | 1 cut(s) | 160 |
| Sse9I | AATT | 1 cut(s) | 251 |
| SspMI | CTAG | 1 cut(s) | 146 |
| StyD4I | CCNGG | 1 cut(s) | 42 |
| TaaI | ACNGT | 3 cut(s) | 115, 212, 287 |
| TaiI | ACGT | 1 cut(s) | 64 |
| TasI | AATT | 1 cut(s) | 251 |
| TfiI | GAWTC | 1 cut(s) | 314 |
| TscAI | CASTG | 2 cut(s) | 217, 292 |
| TseFI | GTSAC | 1 cut(s) | 128 |
| Tsp45I | GTSAC | 1 cut(s) | 128 |
| TspRI | CASTG | 2 cut(s) | 217, 292 |
| XbaI | TCTAGA | 1 cut(s) | 145 |
| XceI | RCATGY | 1 cut(s) | 160 |
| XspI | CTAG | 1 cut(s) | 146 |