DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 350 |
| AclWI | GGATC | 3 cut(s) | 179, 329, 368 |
| AcsI | RAATTY | 2 cut(s) | 59, 259 |
| AfaI | GTAC | 2 cut(s) | 93, 160 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 349 |
| AgsI | TTSAA | 2 cut(s) | 268, 325 |
| AjnI | CCWGG | 1 cut(s) | 232 |
| AluBI | AGCT | 3 cut(s) | 74, 433, 476 |
| AluI | AGCT | 3 cut(s) | 74, 433, 476 |
| Alw21I | GWGCWC | 2 cut(s) | 102, 478 |
| Alw26I | GTCTC | 1 cut(s) | 231 |
| AlwI | GGATC | 3 cut(s) | 179, 329, 368 |
| AoxI | GGCC | 1 cut(s) | 230 |
| ApeKI | GCWGC | 1 cut(s) | 559 |
| ApoI | RAATTY | 2 cut(s) | 59, 259 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 351, 383 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 103 |
| BanII | GRGCYC | 1 cut(s) | 478 |
| Bbv12I | GWGCWC | 2 cut(s) | 102, 478 |
| BbvI | GCAGC | 1 cut(s) | 546 |
| BccI | CCATC | 1 cut(s) | 160 |
| BciT130I | CCWGG | 1 cut(s) | 234 |
| BcoDI | GTCTC | 1 cut(s) | 231 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 1 cut(s) | 560 |
| BlsI | GCNGC | 1 cut(s) | 561 |
| Bme1390I | CCNGG | 1 cut(s) | 234 |
| BmrFI | CCNGG | 1 cut(s) | 234 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 9, 41, 112, 144, 114, 146 |
| BpuEI | CTTGAG | 2 cut(s) | 211, 275 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 228, 258 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 349 |
| Bse1I | ACTGG | 2 cut(s) | 95, 114 |
| BseBI | CCWGG | 1 cut(s) | 234 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 349 |
| BseMII | CTCAG | 2 cut(s) | 453, 578 |
| BseNI | ACTGG | 2 cut(s) | 95, 114 |
| BseXI | GCAGC | 1 cut(s) | 546 |
| BshFI | GGCC | 1 cut(s) | 232 |
| BsiHKAI | GWGCWC | 2 cut(s) | 102, 478 |
| BslFI | GGGAC | 1 cut(s) | 353 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 349 |
| BsmAI | GTCTC | 1 cut(s) | 231 |
| BsmFI | GGGAC | 1 cut(s) | 353 |
| BsmI | GAATGC | 1 cut(s) | 331 |
| BsnI | GGCC | 1 cut(s) | 232 |
| Bsp1286I | GDGCHC | 2 cut(s) | 102, 478 |
| Bsp143I | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| BspACI | CCGC | 1 cut(s) | 350 |
| BspANI | GGCC | 1 cut(s) | 232 |
| BspCNI | CTCAG | 2 cut(s) | 452, 577 |
| BspPI | GGATC | 3 cut(s) | 179, 329, 368 |
| BsrI | ACTGG | 2 cut(s) | 95, 114 |
| BssMI | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| Bst2UI | CCWGG | 1 cut(s) | 234 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 313 |
| Bst6I | CTCTTC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 466 |
| BstDEI | CTNAG | 3 cut(s) | 11, 439, 564 |
| BstKTI | GATC | 5 cut(s) | 25, 187, 337, 376, 430 |
| BstMAI | GTCTC | 1 cut(s) | 231 |
| BstMBI | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 430 |
| BstNI | CCWGG | 1 cut(s) | 234 |
| BstSCI | CCNGG | 1 cut(s) | 232 |
| BstV1I | GCAGC | 1 cut(s) | 546 |
| BstX2I | RGATCY | 2 cut(s) | 22, 373 |
| BstYI | RGATCY | 2 cut(s) | 22, 373 |
| BsuRI | GGCC | 1 cut(s) | 232 |
| BtsIMutI | CAGTG | 2 cut(s) | 102, 392 |
| Cac8I | GCNNGC | 1 cut(s) | 466 |
| Csp6I | GTAC | 2 cut(s) | 92, 159 |
| CviAII | CATG | 1 cut(s) | 461 |
| CviJI | RGCY | 7 cut(s) | 74, 232, 383, 409, 433, 476, 559 |
| CviKI_1 | RGCY | 7 cut(s) | 74, 232, 383, 409, 433, 476, 559 |
| CviQI | GTAC | 2 cut(s) | 92, 159 |
| DdeI | CTNAG | 3 cut(s) | 11, 439, 564 |
| DpnI | GATC | 5 cut(s) | 24, 186, 336, 375, 429 |
| DpnII | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| DraI | TTTAAA | 1 cut(s) | 136 |
| Eam1104I | CTCTTC | 1 cut(s) | 10 |
| EarI | CTCTTC | 1 cut(s) | 10 |
| Ecl136II | GAGCTC | 1 cut(s) | 476 |
| Eco24I | GRGCYC | 1 cut(s) | 478 |
| Eco53kI | GAGCTC | 1 cut(s) | 476 |
| EcoICRI | GAGCTC | 1 cut(s) | 476 |
| EcoRII | CCWGG | 1 cut(s) | 232 |
| EcoT38I | GRGCYC | 1 cut(s) | 478 |
| FaeI | CATG | 1 cut(s) | 464 |
| FaiI | YATR | 5 cut(s) | 211, 346, 348, 462, 579 |
| FaqI | GGGAC | 1 cut(s) | 353 |
| FatI | CATG | 1 cut(s) | 460 |
| Fnu4HI | GCNGC | 1 cut(s) | 560 |
| FriOI | GRGCYC | 1 cut(s) | 478 |
| Fsp4HI | GCNGC | 1 cut(s) | 560 |
| GluI | GCNGC | 1 cut(s) | 560 |
| HaeIII | GGCC | 1 cut(s) | 232 |
| Hin1II | CATG | 1 cut(s) | 464 |
| HinfI | GANTC | 3 cut(s) | 123, 295, 456 |
| HphI | GGTGA | 2 cut(s) | 56, 103 |
| Hpy188I | TCNGA | 4 cut(s) | 80, 442, 520, 567 |
| Hpy188III | TCNNGA | 4 cut(s) | 188, 292, 338, 377 |
| HpyAV | CCTTC | 2 cut(s) | 549, 562 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 313 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyCH4V | TGCA | 5 cut(s) | 53, 197, 257, 329, 464 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 430 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 439, 564 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92II | CATG | 1 cut(s) | 464 |
| Kzo9I | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| Lsp1109I | GCAGC | 1 cut(s) | 546 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MaeIII | GTNAC | 2 cut(s) | 124, 416 |
| MalI | GATC | 5 cut(s) | 24, 186, 336, 375, 429 |
| MboI | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| MboII | GAAGA | 2 cut(s) | 27, 32 |
| MflI | RGATCY | 2 cut(s) | 22, 373 |
| MhlI | GDGCHC | 2 cut(s) | 102, 478 |
| MluCI | AATT | 4 cut(s) | 59, 144, 252, 259 |
| MlyI | GAGTC | 1 cut(s) | 132 |
| MnlI | CCTC | 5 cut(s) | 184, 394, 446, 504, 573 |
| MseI | TTAA | 3 cut(s) | 63, 135, 246 |
| MspR9I | CCNGG | 1 cut(s) | 234 |
| Mva1269I | GAATGC | 1 cut(s) | 331 |
| MvaI | CCWGG | 1 cut(s) | 234 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 430 |
| NdeII | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| NlaIII | CATG | 1 cut(s) | 464 |
| NmuCI | GTSAC | 2 cut(s) | 124, 416 |
| PctI | GAATGC | 1 cut(s) | 331 |
| PfeI | GAWTC | 2 cut(s) | 295, 456 |
| PkrI | GCNGC | 1 cut(s) | 561 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| Psp124BI | GAGCTC | 1 cut(s) | 478 |
| Psp6I | CCWGG | 1 cut(s) | 232 |
| PspGI | CCWGG | 1 cut(s) | 232 |
| PsuI | RGATCY | 2 cut(s) | 22, 373 |
| RsaI | GTAC | 2 cut(s) | 93, 160 |
| RsaNI | GTAC | 2 cut(s) | 92, 159 |
| SacI | GAGCTC | 1 cut(s) | 478 |
| SaqAI | TTAA | 3 cut(s) | 63, 135, 246 |
| SatI | GCNGC | 1 cut(s) | 560 |
| Sau3AI | GATC | 5 cut(s) | 22, 184, 334, 373, 427 |
| SchI | GAGTC | 1 cut(s) | 132 |
| ScrFI | CCNGG | 1 cut(s) | 234 |
| SduI | GDGCHC | 2 cut(s) | 102, 478 |
| SetI | ASST | 8 cut(s) | 12, 69, 76, 195, 246, 345, 435, 478 |
| SmlI | CTYRAG | 2 cut(s) | 226, 290 |
| SmoI | CTYRAG | 2 cut(s) | 226, 290 |
| Sse9I | AATT | 4 cut(s) | 59, 144, 252, 259 |
| SsiI | CCGC | 1 cut(s) | 350 |
| SspI | AATATT | 1 cut(s) | 364 |
| SstI | GAGCTC | 1 cut(s) | 478 |
| StyD4I | CCNGG | 1 cut(s) | 232 |
| TaaI | ACNGT | 2 cut(s) | 91, 313 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TasI | AATT | 4 cut(s) | 59, 144, 252, 259 |
| TatI | WGTACW | 1 cut(s) | 158 |
| TfiI | GAWTC | 2 cut(s) | 295, 456 |
| Tru1I | TTAA | 3 cut(s) | 63, 135, 246 |
| Tru9I | TTAA | 3 cut(s) | 63, 135, 246 |
| TscAI | CASTG | 2 cut(s) | 102, 399 |
| TseFI | GTSAC | 2 cut(s) | 124, 416 |
| TseI | GCWGC | 1 cut(s) | 559 |
| Tsp45I | GTSAC | 2 cut(s) | 124, 416 |
| TspDTI | ATGAA | 2 cut(s) | 166, 252 |
| TspRI | CASTG | 2 cut(s) | 102, 399 |
| XapI | RAATTY | 2 cut(s) | 59, 259 |