DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 201 |
| AarI | CACCTGC | 1 cut(s) | 26 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 113 |
| Acc36I | ACCTGC | 1 cut(s) | 26 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 277 |
| AciI | CCGC | 1 cut(s) | 101 |
| AclWI | GGATC | 1 cut(s) | 306 |
| AfaI | GTAC | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 277 |
| AgsI | TTSAA | 2 cut(s) | 32, 337 |
| AleI | CACNNNNGTG | 1 cut(s) | 320 |
| AluBI | AGCT | 1 cut(s) | 358 |
| AluI | AGCT | 1 cut(s) | 358 |
| AlwI | GGATC | 1 cut(s) | 306 |
| AoxI | GGCC | 2 cut(s) | 82, 281 |
| AspA2I | CCTAGG | 1 cut(s) | 215 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AvrII | CCTAGG | 1 cut(s) | 215 |
| BciVI | GTATCC | 1 cut(s) | 222 |
| BfaI | CTAG | 1 cut(s) | 216 |
| BfuAI | ACCTGC | 1 cut(s) | 26 |
| BfuI | GTATCC | 1 cut(s) | 222 |
| BlnI | CCTAGG | 1 cut(s) | 215 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| Bsa29I | ATCGAT | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 1 cut(s) | 215 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 277 |
| Bse1I | ACTGG | 2 cut(s) | 85, 271 |
| BseCI | ATCGAT | 1 cut(s) | 310 |
| BseDI | CCNNGG | 1 cut(s) | 215 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 277 |
| BseNI | ACTGG | 2 cut(s) | 85, 271 |
| BshFI | GGCC | 2 cut(s) | 84, 283 |
| BshVI | ATCGAT | 1 cut(s) | 310 |
| BslFI | GGGAC | 2 cut(s) | 5, 83 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 277 |
| BsmFI | GGGAC | 2 cut(s) | 5, 83 |
| BsnI | GGCC | 2 cut(s) | 84, 283 |
| Bsp143I | GATC | 2 cut(s) | 307, 311 |
| BspACI | CCGC | 1 cut(s) | 101 |
| BspANI | GGCC | 2 cut(s) | 84, 283 |
| BspDI | ATCGAT | 1 cut(s) | 310 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspMI | ACCTGC | 1 cut(s) | 26 |
| BspPI | GGATC | 1 cut(s) | 306 |
| BsrI | ACTGG | 2 cut(s) | 85, 271 |
| BssECI | CCNNGG | 1 cut(s) | 215 |
| BssMI | GATC | 2 cut(s) | 307, 311 |
| BssT1I | CCWWGG | 1 cut(s) | 215 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| BstC8I | GCNNGC | 1 cut(s) | 43 |
| BstDEI | CTNAG | 1 cut(s) | 359 |
| BstKTI | GATC | 2 cut(s) | 310, 314 |
| BstMBI | GATC | 2 cut(s) | 307, 311 |
| Bsu15I | ATCGAT | 1 cut(s) | 310 |
| BsuI | GTATCC | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 84, 283 |
| BsuTUI | ATCGAT | 1 cut(s) | 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 278 |
| BveI | ACCTGC | 1 cut(s) | 26 |
| Cac8I | GCNNGC | 1 cut(s) | 43 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| ClaI | ATCGAT | 1 cut(s) | 310 |
| CseI | GACGC | 1 cut(s) | 164 |
| Csp6I | GTAC | 1 cut(s) | 66 |
| CviAII | CATG | 3 cut(s) | 104, 113, 257 |
| CviJI | RGCY | 4 cut(s) | 84, 220, 283, 358 |
| CviKI_1 | RGCY | 4 cut(s) | 84, 220, 283, 358 |
| CviQI | GTAC | 1 cut(s) | 66 |
| DdeI | CTNAG | 1 cut(s) | 359 |
| DpnI | GATC | 2 cut(s) | 309, 313 |
| DpnII | GATC | 2 cut(s) | 307, 311 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 113 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 1 cut(s) | 215 |
| Eco32I | GATATC | 1 cut(s) | 235 |
| EcoO109I | RGGNCCY | 1 cut(s) | 281 |
| EcoRV | GATATC | 1 cut(s) | 235 |
| EcoT14I | CCWWGG | 1 cut(s) | 215 |
| ErhI | CCWWGG | 1 cut(s) | 215 |
| FaeI | CATG | 3 cut(s) | 107, 116, 260 |
| FaiI | YATR | 7 cut(s) | 12, 17, 48, 105, 114, 201, 258 |
| FaqI | GGGAC | 2 cut(s) | 5, 83 |
| FatI | CATG | 3 cut(s) | 103, 112, 256 |
| FauI | CCCGC | 1 cut(s) | 108 |
| FspBI | CTAG | 1 cut(s) | 216 |
| HaeIII | GGCC | 2 cut(s) | 84, 283 |
| HgaI | GACGC | 1 cut(s) | 164 |
| Hin1II | CATG | 3 cut(s) | 107, 116, 260 |
| HincII | GTYRAC | 2 cut(s) | 123, 150 |
| HindII | GTYRAC | 2 cut(s) | 123, 150 |
| HinfI | GANTC | 1 cut(s) | 267 |
| HpaI | GTTAAC | 1 cut(s) | 123 |
| Hpy166II | GTNNAC | 3 cut(s) | 123, 150, 295 |
| Hpy188I | TCNGA | 1 cut(s) | 346 |
| Hpy8I | GTNNAC | 3 cut(s) | 123, 150, 295 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 1 cut(s) | 359 |
| Hsp92II | CATG | 3 cut(s) | 107, 116, 260 |
| KspAI | GTTAAC | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 307, 311 |
| LpnPI | CCDG | 4 cut(s) | 21, 98, 284, 297 |
| MaeI | CTAG | 1 cut(s) | 216 |
| MaeIII | GTNAC | 1 cut(s) | 176 |
| MalI | GATC | 2 cut(s) | 309, 313 |
| MboI | GATC | 2 cut(s) | 307, 311 |
| MluCI | AATT | 3 cut(s) | 27, 58, 303 |
| MlyI | GAGTC | 1 cut(s) | 276 |
| MmeI | TCCRAC | 1 cut(s) | 244 |
| MnlI | CCTC | 1 cut(s) | 74 |
| MseI | TTAA | 2 cut(s) | 122, 141 |
| MslI | CAYNNNNRTG | 1 cut(s) | 320 |
| NdeII | GATC | 2 cut(s) | 307, 311 |
| NlaIII | CATG | 3 cut(s) | 107, 116, 260 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NmuCI | GTSAC | 1 cut(s) | 176 |
| OliI | CACNNNNGTG | 1 cut(s) | 320 |
| PaqCI | CACCTGC | 1 cut(s) | 26 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 277 |
| PleI | GAGTC | 1 cut(s) | 275 |
| PpsI | GAGTC | 1 cut(s) | 275 |
| PsiI | TTATAA | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| RsaI | GTAC | 1 cut(s) | 67 |
| RsaNI | GTAC | 1 cut(s) | 66 |
| RseI | CAYNNNNRTG | 1 cut(s) | 320 |
| SaqAI | TTAA | 2 cut(s) | 122, 141 |
| Sau3AI | GATC | 2 cut(s) | 307, 311 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| SchI | GAGTC | 1 cut(s) | 276 |
| SetI | ASST | 3 cut(s) | 40, 169, 360 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 320 |
| Sse9I | AATT | 3 cut(s) | 27, 58, 303 |
| SsiI | CCGC | 1 cut(s) | 101 |
| SspMI | CTAG | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 215 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaqI | TCGA | 2 cut(s) | 91, 310 |
| TasI | AATT | 3 cut(s) | 27, 58, 303 |
| Tru1I | TTAA | 2 cut(s) | 122, 141 |
| Tru9I | TTAA | 2 cut(s) | 122, 141 |
| TscAI | CASTG | 1 cut(s) | 278 |
| TseFI | GTSAC | 1 cut(s) | 176 |
| Tsp45I | GTSAC | 1 cut(s) | 176 |
| TspRI | CASTG | 1 cut(s) | 278 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 277 |
| XmaJI | CCTAGG | 1 cut(s) | 215 |
| XspI | CTAG | 1 cut(s) | 216 |