DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 442 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 85 |
| AccII | CGCG | 3 cut(s) | 429, 437, 439 |
| AciI | CCGC | 3 cut(s) | 427, 429, 439 |
| AcsI | RAATTY | 3 cut(s) | 60, 263, 410 |
| AfaI | GTAC | 1 cut(s) | 359 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 85 |
| AflII | CTTAAG | 1 cut(s) | 229 |
| AgsI | TTSAA | 2 cut(s) | 16, 421 |
| AjnI | CCWGG | 1 cut(s) | 470 |
| AluBI | AGCT | 5 cut(s) | 8, 51, 100, 334, 343 |
| AluI | AGCT | 5 cut(s) | 8, 51, 100, 334, 343 |
| Alw21I | GWGCWC | 2 cut(s) | 274, 330 |
| Alw26I | GTCTC | 1 cut(s) | 392 |
| Alw44I | GTGCAC | 1 cut(s) | 326 |
| ApaLI | GTGCAC | 1 cut(s) | 326 |
| ApeKI | GCWGC | 1 cut(s) | 293 |
| ApoI | RAATTY | 3 cut(s) | 60, 263, 410 |
| AseI | ATTAAT | 1 cut(s) | 114 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 263 |
| AspLEI | GCGC | 1 cut(s) | 439 |
| BaeGI | GKGCMC | 2 cut(s) | 330, 445 |
| BanI | GGYRCC | 1 cut(s) | 442 |
| Bbv12I | GWGCWC | 2 cut(s) | 274, 330 |
| BbvI | GCAGC | 1 cut(s) | 305 |
| BccI | CCATC | 1 cut(s) | 87 |
| BceAI | ACGGC | 1 cut(s) | 379 |
| BciT130I | CCWGG | 1 cut(s) | 472 |
| BcoDI | GTCTC | 1 cut(s) | 392 |
| BfaI | CTAG | 1 cut(s) | 452 |
| BfmI | CTRYAG | 1 cut(s) | 482 |
| BfrI | CTTAAG | 1 cut(s) | 229 |
| BglII | AGATCT | 1 cut(s) | 136 |
| BisI | GCNGC | 2 cut(s) | 294, 430 |
| BlsI | GCNGC | 2 cut(s) | 295, 431 |
| Bme1390I | CCNGG | 1 cut(s) | 472 |
| BmiI | GGNNCC | 1 cut(s) | 444 |
| BmrFI | CCNGG | 1 cut(s) | 472 |
| BpmI | CTGGAG | 1 cut(s) | 374 |
| BsaJI | CCNNGG | 2 cut(s) | 427, 470 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 85 |
| BseBI | CCWGG | 1 cut(s) | 472 |
| BseDI | CCNNGG | 2 cut(s) | 427, 470 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 85 |
| BseSI | GKGCMC | 2 cut(s) | 330, 445 |
| BseXI | GCAGC | 1 cut(s) | 305 |
| Bsh1236I | CGCG | 3 cut(s) | 429, 437, 439 |
| BshNI | GGYRCC | 1 cut(s) | 442 |
| BsiHKAI | GWGCWC | 2 cut(s) | 274, 330 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 85 |
| BsmAI | GTCTC | 1 cut(s) | 392 |
| Bsp1286I | GDGCHC | 3 cut(s) | 274, 330, 445 |
| Bsp143I | GATC | 3 cut(s) | 124, 136, 213 |
| BspACI | CCGC | 3 cut(s) | 427, 429, 439 |
| BspFNI | CGCG | 3 cut(s) | 429, 437, 439 |
| BspLI | GGNNCC | 1 cut(s) | 444 |
| BspT107I | GGYRCC | 1 cut(s) | 442 |
| BspTI | CTTAAG | 1 cut(s) | 229 |
| BssECI | CCNNGG | 2 cut(s) | 427, 470 |
| BssMI | GATC | 3 cut(s) | 124, 136, 213 |
| Bst2UI | CCWGG | 1 cut(s) | 472 |
| Bst4CI | ACNGT | 2 cut(s) | 95, 325 |
| BstAFI | CTTAAG | 1 cut(s) | 229 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 441 |
| BstDSI | CCRYGG | 1 cut(s) | 427 |
| BstFNI | CGCG | 3 cut(s) | 429, 437, 439 |
| BstHHI | GCGC | 1 cut(s) | 439 |
| BstKTI | GATC | 3 cut(s) | 127, 139, 216 |
| BstMAI | GTCTC | 1 cut(s) | 392 |
| BstMBI | GATC | 3 cut(s) | 124, 136, 213 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 340 |
| BstNI | CCWGG | 1 cut(s) | 472 |
| BstSCI | CCNGG | 1 cut(s) | 470 |
| BstSFI | CTRYAG | 1 cut(s) | 482 |
| BstSLI | GKGCMC | 2 cut(s) | 330, 445 |
| BstUI | CGCG | 3 cut(s) | 429, 437, 439 |
| BstV1I | GCAGC | 1 cut(s) | 305 |
| BstX2I | RGATCY | 1 cut(s) | 136 |
| BstYI | RGATCY | 1 cut(s) | 136 |
| BtgI | CCRYGG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 1 cut(s) | 330 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 441 |
| CfoI | GCGC | 1 cut(s) | 439 |
| Cfr42I | CCGCGG | 1 cut(s) | 430 |
| CseI | GACGC | 1 cut(s) | 189 |
| Csp6I | GTAC | 1 cut(s) | 358 |
| CviAII | CATG | 1 cut(s) | 163 |
| CviJI | RGCY | 7 cut(s) | 8, 51, 100, 244, 334, 343, 394 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 51, 100, 244, 334, 343, 394 |
| CviQI | GTAC | 1 cut(s) | 358 |
| DpnI | GATC | 3 cut(s) | 126, 138, 215 |
| DpnII | GATC | 3 cut(s) | 124, 136, 213 |
| EcoRII | CCWGG | 1 cut(s) | 470 |
| FaeI | CATG | 1 cut(s) | 166 |
| FaiI | YATR | 4 cut(s) | 35, 164, 257, 383 |
| FatI | CATG | 1 cut(s) | 162 |
| FauI | CCCGC | 2 cut(s) | 432, 434 |
| Fnu4HI | GCNGC | 2 cut(s) | 294, 430 |
| Fsp4HI | GCNGC | 2 cut(s) | 294, 430 |
| FspBI | CTAG | 1 cut(s) | 452 |
| GlaI | GCGC | 1 cut(s) | 438 |
| GluI | GCNGC | 2 cut(s) | 294, 430 |
| GsuI | CTGGAG | 1 cut(s) | 374 |
| HgaI | GACGC | 1 cut(s) | 189 |
| HhaI | GCGC | 1 cut(s) | 439 |
| Hin1II | CATG | 1 cut(s) | 166 |
| Hin6I | GCGC | 1 cut(s) | 437 |
| HinP1I | GCGC | 1 cut(s) | 437 |
| HincII | GTYRAC | 1 cut(s) | 457 |
| HindII | GTYRAC | 1 cut(s) | 457 |
| HindIII | AAGCTT | 1 cut(s) | 341 |
| HinfI | GANTC | 1 cut(s) | 75 |
| HpaI | GTTAAC | 1 cut(s) | 457 |
| Hpy166II | GTNNAC | 2 cut(s) | 328, 457 |
| Hpy188III | TCNNGA | 1 cut(s) | 304 |
| Hpy8I | GTNNAC | 2 cut(s) | 328, 457 |
| HpyCH4III | ACNGT | 2 cut(s) | 95, 325 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 328, 377, 407 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 340 |
| Hsp92II | CATG | 1 cut(s) | 166 |
| HspAI | GCGC | 1 cut(s) | 437 |
| KspAI | GTTAAC | 1 cut(s) | 457 |
| KspI | CCGCGG | 1 cut(s) | 430 |
| Kzo9I | GATC | 3 cut(s) | 124, 136, 213 |
| LmnI | GCTCC | 2 cut(s) | 45, 277 |
| LpnPI | CCDG | 4 cut(s) | 86, 344, 404, 457 |
| Lsp1109I | GCAGC | 1 cut(s) | 305 |
| MaeI | CTAG | 1 cut(s) | 452 |
| MalI | GATC | 3 cut(s) | 126, 138, 215 |
| MboI | GATC | 3 cut(s) | 124, 136, 213 |
| MboII | GAAGA | 1 cut(s) | 119 |
| MfeI | CAATTG | 1 cut(s) | 168 |
| MflI | RGATCY | 1 cut(s) | 136 |
| MhlI | GDGCHC | 3 cut(s) | 274, 330, 445 |
| MluCI | AATT | 4 cut(s) | 60, 168, 263, 410 |
| MnlI | CCTC | 3 cut(s) | 166, 185, 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 263 |
| MseI | TTAA | 5 cut(s) | 114, 180, 230, 345, 456 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspA1I | CMGCKG | 3 cut(s) | 100, 334, 429 |
| MspCI | CTTAAG | 1 cut(s) | 229 |
| MspR9I | CCNGG | 1 cut(s) | 472 |
| MunI | CAATTG | 1 cut(s) | 168 |
| MvaI | CCWGG | 1 cut(s) | 472 |
| MvnI | CGCG | 3 cut(s) | 429, 437, 439 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 340 |
| NdeII | GATC | 3 cut(s) | 124, 136, 213 |
| NlaIII | CATG | 1 cut(s) | 166 |
| NlaIV | GGNNCC | 1 cut(s) | 444 |
| PdmI | GAANNNNTTC | 1 cut(s) | 263 |
| PfeI | GAWTC | 1 cut(s) | 75 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 85 |
| PkrI | GCNGC | 2 cut(s) | 295, 431 |
| PshBI | ATTAAT | 1 cut(s) | 114 |
| Psp6I | CCWGG | 1 cut(s) | 470 |
| PspGI | CCWGG | 1 cut(s) | 470 |
| PspN4I | GGNNCC | 1 cut(s) | 444 |
| PsuI | RGATCY | 1 cut(s) | 136 |
| PvuII | CAGCTG | 2 cut(s) | 100, 334 |
| RsaI | GTAC | 1 cut(s) | 359 |
| RsaNI | GTAC | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SacII | CCGCGG | 1 cut(s) | 430 |
| SaqAI | TTAA | 5 cut(s) | 114, 180, 230, 345, 456 |
| SatI | GCNGC | 2 cut(s) | 294, 430 |
| Sau3AI | GATC | 3 cut(s) | 124, 136, 213 |
| ScrFI | CCNGG | 1 cut(s) | 472 |
| SduI | GDGCHC | 3 cut(s) | 274, 330, 445 |
| SetI | ASST | 8 cut(s) | 10, 53, 102, 236, 303, 336, 345, 462 |
| SfcI | CTRYAG | 1 cut(s) | 482 |
| Sfr303I | CCGCGG | 1 cut(s) | 430 |
| SgrBI | CCGCGG | 1 cut(s) | 430 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| SmlI | CTYRAG | 1 cut(s) | 229 |
| SmoI | CTYRAG | 1 cut(s) | 229 |
| Sse9I | AATT | 4 cut(s) | 60, 168, 263, 410 |
| SsiI | CCGC | 3 cut(s) | 427, 429, 439 |
| SspMI | CTAG | 1 cut(s) | 452 |
| StyD4I | CCNGG | 1 cut(s) | 470 |
| TaaI | ACNGT | 2 cut(s) | 95, 325 |
| TaqI | TCGA | 1 cut(s) | 303 |
| TasI | AATT | 4 cut(s) | 60, 168, 263, 410 |
| TatI | WGTACW | 1 cut(s) | 357 |
| TauI | GCSGC | 1 cut(s) | 432 |
| TfiI | GAWTC | 1 cut(s) | 75 |
| Tru1I | TTAA | 5 cut(s) | 114, 180, 230, 345, 456 |
| Tru9I | TTAA | 5 cut(s) | 114, 180, 230, 345, 456 |
| TscAI | CASTG | 1 cut(s) | 330 |
| TseI | GCWGC | 1 cut(s) | 293 |
| TspDTI | ATGAA | 2 cut(s) | 22, 272 |
| TspGWI | ACGGA | 1 cut(s) | 257 |
| TspRI | CASTG | 1 cut(s) | 330 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 85 |
| Vha464I | CTTAAG | 1 cut(s) | 229 |
| VneI | GTGCAC | 1 cut(s) | 326 |
| VspI | ATTAAT | 1 cut(s) | 114 |
| XapI | RAATTY | 3 cut(s) | 60, 263, 410 |
| XmnI | GAANNNNTTC | 1 cut(s) | 263 |
| XspI | CTAG | 1 cut(s) | 452 |