Rorug07G0189200

DNA recombination

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
15976934 .. 15983068
6135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0189200.1

Sequence Viewer

Length: 1236 bp
ATGAAAGGCGTCTACTCGGCGCCCGGAGATTACATCTACTTCAAGTCCCAGGTCCCTCTTCACAAGATCCCAATTGGCACAAAGCAGTGGCGATACTATGATTTTGGTCCGAAAGCAGTAACTCCACTTATATGTCTTCCTGGAACAGCAGGGACAGCAGATGTCTGTTACAAGCAGATCATGGCATTGTCCATGAAGGGTTACAGGGTTATTTCTGTTGATATTCCACGTGTATGGAATCATCAAGAATGGATTCAAGCATTTGAAAAGTTCTTGGATGCTATTGATGTTCATCATATACATCTCTATGGTACATCCCTTGGGGGCTTTTTGGCTCAACTTTTTGCTCAGCATCGTCCAAGACGGGTTCGATCGTTGATACTATCAAATACCTTTCTGGACACACGTGACTTCTCTGCAGCAATGCCATGGGCTCCCATCGTTAGTTGGACCCCCTCTTTTTTGCTGAAAAGATACGTCTTATCAGGAATTCGTGATGGCCCCCACGAGCCATTTATTGCGGATTCAGTGGACTTTGTTGTTTCTCAGGTTGAAACACTCTCAAGGGAAGACCTGGCCTCCAGGTTGACTTTAACAGCTGATGCTGCACAAGTTGGACCTCTTTTGCTCACAGACTCATTCATCACCATAATGGATACAAATGACTACAGTGCGATTCCTCAACAACTCAAAGATCAACTGAGTGAAAGGTACCCCGAAGCAAGGCGTGCACAATTAAAGACTGGGGGAGATTTTCCATTTCTTTCACGCCCAGATGAAGTCAACTTACATCTTCAGCTACACCTAAGACGAGTTGGTGTGGAAGCTCGACCTGACTTGGTTCCGGGCATCTCGAAGGGAGGTAGTGGTGGTGGGAGCTCCAATGAAGAGAATGAGAAAAAAGATCAGGACAAAAAAGATCCGGATGATCCATCCAAGGATGATCAGGGAAATTCAGAAAGTTCTAATGAAGAAAGTCAGATCCCACCACCCCCAGAAAGTTCAGAATCTCATAGCTTAGACGACCAGCTTGTCAACAATGCACAGTTTTGCCCCTTGAGTAATGAACACGTGGTCGTTTCCTTGCTTTCTGAATTCTTTAAGCAACAACACACTGTACCCCCTGAAATAGTTTTGCGATTATGGGAAACGTTTTCTATTCATTTGCTTTCTTTATGTGTGGGATCGTTGTACATTAGTTTGAACTGTAATCAGAAGCTTAGACAAGTCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

411

Amino Acids

46.11

Weight (kDa)

5.72

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 42 - 160 3e-13 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 43 - 261 1.6e-08 Alpha/beta hydrolase family
Hydrolase_4 PF12146 84 - 161 4.3e-06 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1031
Acc65I GGTACC 1 cut(s) 711
AccB1I GGYRCC 2 cut(s) 19, 711
AccI GTMKAC 1 cut(s) 12
AccIII TCCGGA 1 cut(s) 922
AciI CCGC 1 cut(s) 521
AclI AACGTT 1 cut(s) 1151
AclWI GGATC 5 cut(s) 61, 914, 923, 976, 1192
AcsI RAATTY 3 cut(s) 489, 952, 1094
AcuI CTGAAG 1 cut(s) 779
AcvI CACGTG 3 cut(s) 230, 407, 1072
AcyI GRCGYC 2 cut(s) 9, 20
AfaI GTAC 4 cut(s) 313, 713, 1119, 1193
AfiI CCNNNNNNNGG 1 cut(s) 723
AflIII ACRYGT 3 cut(s) 229, 404, 1069
AgsI TTSAA 5 cut(s) 43, 257, 266, 554, 1204
AjnI CCWGG 4 cut(s) 48, 139, 573, 581
AluBI AGCT 7 cut(s) 599, 799, 827, 879, 1017, 1030, 1219
AluI AGCT 7 cut(s) 599, 799, 827, 879, 1017, 1030, 1219
Alw21I GWGCWC 2 cut(s) 733, 881
Alw44I GTGCAC 1 cut(s) 729
AlwI GGATC 5 cut(s) 61, 914, 923, 976, 1192
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 2 cut(s) 499, 576
ApaLI GTGCAC 1 cut(s) 729
ApeKI GCWGC 2 cut(s) 419, 605
ApoI RAATTY 3 cut(s) 489, 952, 1094
Asp700I GAANNNNTTC 1 cut(s) 252
Asp718I GGTACC 1 cut(s) 711
AspLEI GCGC 1 cut(s) 22
AspS9I GGNCC 5 cut(s) 52, 107, 450, 500, 617
AsuC2I CCSGG 2 cut(s) 24, 846
AsuHPI GGTGA 1 cut(s) 637
AvaII GGWCC 4 cut(s) 52, 107, 450, 617
BaeGI GKGCMC 1 cut(s) 733
BanI GGYRCC 2 cut(s) 19, 711
BanII GRGCYC 2 cut(s) 436, 881
BarI GAAGNNNNNNTAC 2 cut(s) 771, 803
BauI CACGAG 1 cut(s) 506
BbrPI CACGTG 3 cut(s) 230, 407, 1072
BbsI GAAGAC 2 cut(s) 128, 576
Bbv12I GWGCWC 2 cut(s) 733, 881
BbvI GCAGC 2 cut(s) 431, 592
BccI CCATC 3 cut(s) 446, 491, 940
BciT130I CCWGG 4 cut(s) 50, 141, 575, 583
BciVI GTATCC 1 cut(s) 649
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 2 cut(s) 24, 846
BfmI CTRYAG 2 cut(s) 417, 667
BfoI RGCGCY 1 cut(s) 23
BfuI GTATCC 1 cut(s) 649
BisI GCNGC 2 cut(s) 420, 606
BlpI GCTNAGC 1 cut(s) 348
BlsI GCNGC 2 cut(s) 421, 607
Bme1390I CCNGG 6 cut(s) 24, 50, 141, 575, 583, 846
Bme18I GGWCC 4 cut(s) 52, 107, 450, 617
BmgT120I GGNCC 5 cut(s) 52, 107, 450, 500, 617
BmiI GGNNCC 7 cut(s) 21, 54, 435, 452, 502, 713, 843
BmrFI CCNGG 6 cut(s) 24, 50, 141, 575, 583, 846
BmrI ACTGGG 1 cut(s) 753
BmsI GCATC 4 cut(s) 268, 361, 592, 858
BmuI ACTGGG 1 cut(s) 753
BpiI GAAGAC 2 cut(s) 128, 576
BpmI CTGGAG 1 cut(s) 565
Bpu1102I GCTNAGC 1 cut(s) 348
BpuEI CTTGAG 2 cut(s) 547, 1078
BpuMI CCSGG 2 cut(s) 24, 846
BsaAI YACGTR 3 cut(s) 230, 407, 1072
BsaBI GATNNNNATC 1 cut(s) 291
BsaHI GRCGYC 2 cut(s) 9, 20
BsaJI CCNNGG 4 cut(s) 48, 319, 428, 936
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 2 cut(s) 563, 593
Bsc4I CCNNNNNNNGG 1 cut(s) 723
Bse1I ACTGG 1 cut(s) 748
Bse3DI GCAATG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 291
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 4 cut(s) 50, 141, 575, 583
BseDI CCNNGG 4 cut(s) 48, 319, 428, 936
BseGI GGATG 5 cut(s) 283, 314, 931, 932, 946
BseJI GATNNNNATC 1 cut(s) 291
BseLI CCNNNNNNNGG 1 cut(s) 723
BseMI GCAATG 1 cut(s) 429
BseMII CTCAG 3 cut(s) 362, 560, 692
BseNI ACTGG 1 cut(s) 748
BseSI GKGCMC 1 cut(s) 733
BseXI GCAGC 2 cut(s) 431, 592
BsgI GTGCAG 1 cut(s) 591
Bsh1285I CGRYCG 1 cut(s) 374
BshFI GGCC 2 cut(s) 501, 578
BshNI GGYRCC 2 cut(s) 19, 711
BsiEI CGRYCG 1 cut(s) 374
BsiHKAI GWGCWC 2 cut(s) 733, 881
BsiSI CCGG 3 cut(s) 24, 845, 923
BslFI GGGAC 3 cut(s) 31, 38, 166
BslI CCNNNNNNNGG 1 cut(s) 723
BsmFI GGGAC 3 cut(s) 31, 38, 166
BsnI GGCC 2 cut(s) 501, 578
Bsp1286I GDGCHC 3 cut(s) 436, 733, 881
Bsp13I TCCGGA 1 cut(s) 922
Bsp1407I TGTACA 1 cut(s) 1191
Bsp1720I GCTNAGC 1 cut(s) 348
Bsp19I CCATGG 1 cut(s) 428
BspACI CCGC 1 cut(s) 521
BspANI GGCC 2 cut(s) 501, 578
BspCNI CTCAG 3 cut(s) 361, 559, 693
BspEI TCCGGA 1 cut(s) 922
BspLI GGNNCC 7 cut(s) 21, 54, 435, 452, 502, 713, 843
BspMAI CTGCAG 1 cut(s) 421
BspPI GGATC 5 cut(s) 61, 914, 923, 976, 1192
BspT107I GGYRCC 2 cut(s) 19, 711
BsrDI GCAATG 1 cut(s) 429
BsrGI TGTACA 1 cut(s) 1191
BsrI ACTGG 1 cut(s) 748
BssECI CCNNGG 4 cut(s) 48, 319, 428, 936
BssNI GRCGYC 2 cut(s) 9, 20
BssSI CACGAG 1 cut(s) 506
BssT1I CCWWGG 3 cut(s) 319, 428, 936
Bst2BI CACGAG 1 cut(s) 506
Bst2UI CCWGG 4 cut(s) 50, 141, 575, 583
Bst4CI ACNGT 4 cut(s) 671, 1047, 1117, 1208
Bst6I CTCTTC 2 cut(s) 63, 882
BstACI GRCGYC 2 cut(s) 9, 20
BstAPI GCANNNNNTGC 1 cut(s) 728
BstAUI TGTACA 1 cut(s) 1191
BstBAI YACGTR 3 cut(s) 230, 407, 1072
BstC8I GCNNGC 1 cut(s) 729
BstDEI CTNAG 6 cut(s) 348, 546, 701, 806, 1018, 1220
BstDSI CCRYGG 1 cut(s) 428
BstF5I GGATG 5 cut(s) 283, 314, 931, 932, 946
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 1 cut(s) 22
BstMCI CGRYCG 1 cut(s) 374
BstMWI GCNNNNNNNGC 3 cut(s) 155, 605, 728
BstNI CCWGG 4 cut(s) 50, 141, 575, 583
BstSCI CCNGG 6 cut(s) 22, 48, 139, 573, 581, 844
BstSFI CTRYAG 2 cut(s) 417, 667
BstSLI GKGCMC 1 cut(s) 733
BstV1I GCAGC 2 cut(s) 431, 592
BstV2I GAAGAC 2 cut(s) 128, 576
BstX2I RGATCY 3 cut(s) 66, 919, 981
BstXI CCANNNNNNTGG 1 cut(s) 234
BstYI RGATCY 3 cut(s) 66, 919, 981
BsuI GTATCC 1 cut(s) 649
BsuRI GGCC 2 cut(s) 501, 578
BtgI CCRYGG 1 cut(s) 428
BtsCI GGATG 5 cut(s) 283, 314, 931, 932, 946
BtsI GCAGTG 1 cut(s) 92
BtsIMutI CAGTG 4 cut(s) 92, 534, 676, 1113
Cac8I GCNNGC 1 cut(s) 729
CfoI GCGC 1 cut(s) 22
Cfr13I GGNCC 5 cut(s) 52, 107, 450, 500, 617
Csp6I GTAC 4 cut(s) 312, 712, 1118, 1192
CviAII CATG 3 cut(s) 181, 193, 429
CviQI GTAC 4 cut(s) 312, 712, 1118, 1192
DdeI CTNAG 6 cut(s) 348, 546, 701, 806, 1018, 1220
DinI GGCGCC 1 cut(s) 21
DrdI GACNNNNNNGTC 1 cut(s) 1031
DseDI GACNNNNNNGTC 1 cut(s) 1031
Eam1104I CTCTTC 2 cut(s) 63, 882
EarI CTCTTC 2 cut(s) 63, 882
Ecl136II GAGCTC 1 cut(s) 879
Eco130I CCWWGG 3 cut(s) 319, 428, 936
Eco24I GRGCYC 2 cut(s) 436, 881
Eco47I GGWCC 4 cut(s) 52, 107, 450, 617
Eco53kI GAGCTC 1 cut(s) 879
Eco57I CTGAAG 1 cut(s) 779
Eco72I CACGTG 3 cut(s) 230, 407, 1072
EcoICRI GAGCTC 1 cut(s) 879
EcoO109I RGGNCCY 1 cut(s) 52
EcoRI GAATTC 2 cut(s) 489, 1094
EcoRII CCWGG 4 cut(s) 48, 139, 573, 581
EcoT14I CCWWGG 3 cut(s) 319, 428, 936
EcoT38I GRGCYC 2 cut(s) 436, 881
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 3 cut(s) 319, 428, 936
FaeI CATG 3 cut(s) 184, 196, 432
FaqI GGGAC 3 cut(s) 31, 38, 166
FatI CATG 3 cut(s) 180, 192, 428
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 1 cut(s) 12
Fnu4HI GCNGC 2 cut(s) 420, 606
FokI GGATG 5 cut(s) 290, 301, 919, 938, 953
FriOI GRGCYC 2 cut(s) 436, 881
Fsp4HI GCNGC 2 cut(s) 420, 606
GlaI GCGC 1 cut(s) 21
GluI GCNGC 2 cut(s) 420, 606
GsuI CTGGAG 1 cut(s) 565
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 2 cut(s) 501, 578
HapII CCGG 3 cut(s) 24, 845, 923
HhaI GCGC 1 cut(s) 22
Hin1I GRCGYC 2 cut(s) 9, 20
Hin1II CATG 3 cut(s) 184, 196, 432
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HincII GTYRAC 3 cut(s) 588, 784, 1036
HindII GTYRAC 3 cut(s) 588, 784, 1036
HindIII AAGCTT 1 cut(s) 1217
HinfI GANTC 6 cut(s) 238, 253, 524, 635, 676, 1007
HpaII CCGG 3 cut(s) 24, 845, 923
HphI GGTGA 1 cut(s) 637
Hpy166II GTNNAC 6 cut(s) 13, 532, 588, 731, 784, 1036
Hpy188I TCNGA 6 cut(s) 111, 958, 981, 1006, 1093, 1215
Hpy188III TCNNGA 7 cut(s) 245, 398, 486, 494, 853, 908, 923
Hpy8I GTNNAC 6 cut(s) 13, 532, 588, 731, 784, 1036
HpyAV CCTTC 2 cut(s) 190, 850
HpyCH4III ACNGT 4 cut(s) 671, 1047, 1117, 1208
HpyCH4IV ACGT 5 cut(s) 229, 406, 477, 1071, 1151
HpyCH4V TGCA 4 cut(s) 419, 608, 731, 1043
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 605, 728
HpyF3I CTNAG 6 cut(s) 348, 546, 701, 806, 1018, 1220
HpySE526I ACGT 5 cut(s) 229, 406, 477, 1071, 1151
Hsp92I GRCGYC 2 cut(s) 9, 20
Hsp92II CATG 3 cut(s) 184, 196, 432
HspAI GCGC 1 cut(s) 20
KasI GGCGCC 1 cut(s) 19
Kpn2I TCCGGA 1 cut(s) 922
KpnI GGTACC 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 943
LmnI GCTCC 3 cut(s) 439, 876, 884
Lsp1109I GCAGC 2 cut(s) 431, 592
LweI GCATC 4 cut(s) 268, 361, 592, 858
MaeII ACGT 5 cut(s) 229, 406, 477, 1071, 1151
MaeIII GTNAC 4 cut(s) 118, 167, 200, 407
MboII GAAGA 6 cut(s) 50, 128, 581, 785, 899, 983
MfeI CAATTG 1 cut(s) 72
MflI RGATCY 3 cut(s) 66, 919, 981
MhlI GDGCHC 3 cut(s) 436, 733, 881
MluCI AATT 5 cut(s) 72, 489, 734, 952, 1094
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 2 cut(s) 428, 595
MnlI CCTC 6 cut(s) 66, 466, 589, 630, 690, 854
MroI TCCGGA 1 cut(s) 922
MroXI GAANNNNTTC 1 cut(s) 252
MseI TTAA 3 cut(s) 593, 737, 1101
MslI CAYNNNNRTG 4 cut(s) 130, 232, 306, 650
MspA1I CMGCKG 1 cut(s) 599
MspI CCGG 3 cut(s) 24, 845, 923
MspR9I CCNGG 6 cut(s) 24, 50, 141, 575, 583, 846
MunI CAATTG 1 cut(s) 72
MvaI CCWGG 4 cut(s) 50, 141, 575, 583
MwoI GCNNNNNNNGC 3 cut(s) 155, 605, 728
NarI GGCGCC 1 cut(s) 20
NciI CCSGG 2 cut(s) 24, 846
NcoI CCATGG 1 cut(s) 428
NlaIII CATG 3 cut(s) 184, 196, 432
NlaIV GGNNCC 7 cut(s) 21, 54, 435, 452, 502, 713, 843
NmuCI GTSAC 1 cut(s) 407
PdmI GAANNNNTTC 1 cut(s) 252
PfeI GAWTC 5 cut(s) 238, 253, 524, 676, 1007
PfoI TCCNGGA 1 cut(s) 139
PkrI GCNGC 2 cut(s) 421, 607
Ple19I CGATCG 1 cut(s) 374
PleI GAGTC 1 cut(s) 629
PluTI GGCGCC 1 cut(s) 23
PmaCI CACGTG 3 cut(s) 230, 407, 1072
PmlI CACGTG 3 cut(s) 230, 407, 1072
PpsI GAGTC 1 cut(s) 629
Ppu21I YACGTR 3 cut(s) 230, 407, 1072
PpuMI RGGWCCY 1 cut(s) 52
Psp124BI GAGCTC 1 cut(s) 881
Psp1406I AACGTT 1 cut(s) 1151
Psp5II RGGWCCY 1 cut(s) 52
Psp6I CCWGG 4 cut(s) 48, 139, 573, 581
PspCI CACGTG 3 cut(s) 230, 407, 1072
PspGI CCWGG 4 cut(s) 48, 139, 573, 581
PspN4I GGNNCC 7 cut(s) 21, 54, 435, 452, 502, 713, 843
PspPI GGNCC 5 cut(s) 52, 107, 450, 500, 617
PspPPI RGGWCCY 1 cut(s) 52
PstI CTGCAG 1 cut(s) 421
PsuI RGATCY 3 cut(s) 66, 919, 981
PvuI CGATCG 1 cut(s) 374
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 4 cut(s) 313, 713, 1119, 1193
RsaNI GTAC 4 cut(s) 312, 712, 1118, 1192
RseI CAYNNNNRTG 4 cut(s) 130, 232, 306, 650
SacI GAGCTC 1 cut(s) 881
SaqAI TTAA 3 cut(s) 593, 737, 1101
SatI GCNGC 2 cut(s) 420, 606
Sau96I GGNCC 5 cut(s) 52, 107, 450, 500, 617
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 6 cut(s) 24, 50, 141, 575, 583, 846
SduI GDGCHC 3 cut(s) 436, 733, 881
SfaNI GCATC 4 cut(s) 268, 361, 592, 858
SfcI CTRYAG 2 cut(s) 417, 667
SfoI GGCGCC 1 cut(s) 21
SinI GGWCC 4 cut(s) 52, 107, 450, 617
SmiMI CAYNNNNRTG 4 cut(s) 130, 232, 306, 650
SmlI CTYRAG 2 cut(s) 562, 1057
SmoI CTYRAG 2 cut(s) 562, 1057
Sse9I AATT 5 cut(s) 72, 489, 734, 952, 1094
SsiI CCGC 1 cut(s) 521
SspDI GGCGCC 1 cut(s) 19
SstI GAGCTC 1 cut(s) 881
StyD4I CCNGG 6 cut(s) 22, 48, 139, 573, 581, 844
StyI CCWWGG 3 cut(s) 319, 428, 936
TaaI ACNGT 4 cut(s) 671, 1047, 1117, 1208
TaiI ACGT 5 cut(s) 232, 409, 480, 1074, 1154
TaqI TCGA 3 cut(s) 370, 829, 854
TasI AATT 5 cut(s) 72, 489, 734, 952, 1094
TatI WGTACW 1 cut(s) 1191
TfiI GAWTC 5 cut(s) 238, 253, 524, 676, 1007
Tru1I TTAA 3 cut(s) 593, 737, 1101
Tru9I TTAA 3 cut(s) 593, 737, 1101
TscAI CASTG 4 cut(s) 92, 534, 676, 1120
TseFI GTSAC 1 cut(s) 407
TseI GCWGC 2 cut(s) 419, 605
Tsp45I GTSAC 1 cut(s) 407
TspDTI ATGAA 9 cut(s) 17, 209, 281, 631, 792, 900, 984, 1080, 1151
TspRI CASTG 4 cut(s) 92, 534, 676, 1120
VneI GTGCAC 1 cut(s) 729
VpaK11BI GGWCC 4 cut(s) 52, 107, 450, 617
XapI RAATTY 3 cut(s) 489, 952, 1094
XmiI GTMKAC 1 cut(s) 12
XmnI GAANNNNTTC 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.