DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 4 - 105 | 3.5e-13 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 89, 264, 368 |
| AfaI | GTAC | 2 cut(s) | 47, 439 |
| AgsI | TTSAA | 3 cut(s) | 295, 314, 323 |
| Alw21I | GWGCWC | 1 cut(s) | 15 |
| Alw26I | GTCTC | 1 cut(s) | 119 |
| ApoI | RAATTY | 3 cut(s) | 89, 264, 368 |
| AsuHPI | GGTGA | 2 cut(s) | 155, 157 |
| AsuII | TTCGAA | 1 cut(s) | 190 |
| Bbv12I | GWGCWC | 1 cut(s) | 15 |
| BccI | CCATC | 1 cut(s) | 104 |
| BclI | TGATCA | 2 cut(s) | 271, 373 |
| BcoDI | GTCTC | 1 cut(s) | 119 |
| BmsI | GCATC | 2 cut(s) | 136, 455 |
| Bpu14I | TTCGAA | 1 cut(s) | 190 |
| Bsa29I | ATCGAT | 2 cut(s) | 352, 432 |
| BsaI | GGTCTC | 1 cut(s) | 119 |
| BsaJI | CCNNGG | 1 cut(s) | 416 |
| Bse1I | ACTGG | 1 cut(s) | 317 |
| BseCI | ATCGAT | 2 cut(s) | 352, 432 |
| BseDI | CCNNGG | 1 cut(s) | 416 |
| BseMII | CTCAG | 1 cut(s) | 371 |
| BseNI | ACTGG | 1 cut(s) | 317 |
| BshVI | ATCGAT | 2 cut(s) | 352, 432 |
| BsiHKAI | GWGCWC | 1 cut(s) | 15 |
| BsmAI | GTCTC | 1 cut(s) | 119 |
| BsmI | GAATGC | 1 cut(s) | 332 |
| Bso31I | GGTCTC | 1 cut(s) | 119 |
| Bsp119I | TTCGAA | 1 cut(s) | 190 |
| Bsp1286I | GDGCHC | 1 cut(s) | 15 |
| Bsp143I | GATC | 3 cut(s) | 51, 271, 373 |
| Bsp19I | CCATGG | 1 cut(s) | 416 |
| BspCNI | CTCAG | 1 cut(s) | 372 |
| BspDI | ATCGAT | 2 cut(s) | 352, 432 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BspT104I | TTCGAA | 1 cut(s) | 190 |
| BspTNI | GGTCTC | 1 cut(s) | 119 |
| BsrI | ACTGG | 1 cut(s) | 317 |
| BssECI | CCNNGG | 1 cut(s) | 416 |
| BssMI | GATC | 3 cut(s) | 51, 271, 373 |
| BssT1I | CCWWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 1 cut(s) | 307 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 155 |
| BstBI | TTCGAA | 1 cut(s) | 190 |
| BstDEI | CTNAG | 1 cut(s) | 380 |
| BstDSI | CCRYGG | 1 cut(s) | 416 |
| BstKTI | GATC | 3 cut(s) | 54, 274, 376 |
| BstMAI | GTCTC | 1 cut(s) | 119 |
| BstMBI | GATC | 3 cut(s) | 51, 271, 373 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNSI | RCATGY | 2 cut(s) | 28, 158 |
| Bsu15I | ATCGAT | 2 cut(s) | 352, 432 |
| BsuTUI | ATCGAT | 2 cut(s) | 352, 432 |
| BtgI | CCRYGG | 1 cut(s) | 416 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| CciI | TCATGA | 1 cut(s) | 274 |
| ClaI | ATCGAT | 2 cut(s) | 352, 432 |
| Csp6I | GTAC | 2 cut(s) | 46, 438 |
| CviAII | CATG | 6 cut(s) | 25, 155, 275, 391, 400, 417 |
| CviJI | RGCY | 3 cut(s) | 249, 282, 287 |
| CviKI_1 | RGCY | 3 cut(s) | 249, 282, 287 |
| CviQI | GTAC | 2 cut(s) | 46, 438 |
| DdeI | CTNAG | 1 cut(s) | 380 |
| DpnI | GATC | 3 cut(s) | 53, 273, 375 |
| DpnII | GATC | 3 cut(s) | 51, 271, 373 |
| DraI | TTTAAA | 1 cut(s) | 427 |
| Eco130I | CCWWGG | 1 cut(s) | 416 |
| Eco31I | GGTCTC | 1 cut(s) | 119 |
| EcoT14I | CCWWGG | 1 cut(s) | 416 |
| ErhI | CCWWGG | 1 cut(s) | 416 |
| FaeI | CATG | 6 cut(s) | 28, 158, 278, 394, 403, 420 |
| FaiI | YATR | 9 cut(s) | 9, 26, 65, 156, 185, 276, 392, 401, 418 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 293, 325 |
| FatI | CATG | 6 cut(s) | 24, 154, 274, 390, 399, 416 |
| FbaI | TGATCA | 2 cut(s) | 271, 373 |
| Hin1II | CATG | 6 cut(s) | 28, 158, 278, 394, 403, 420 |
| HinfI | GANTC | 3 cut(s) | 38, 170, 354 |
| HphI | GGTGA | 2 cut(s) | 155, 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 217 |
| Hpy188I | TCNGA | 3 cut(s) | 43, 175, 410 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 69, 269, 275, 344 |
| Hpy8I | GTNNAC | 1 cut(s) | 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 307 |
| HpyCH4V | TGCA | 4 cut(s) | 28, 149, 158, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 1 cut(s) | 380 |
| Hsp92II | CATG | 6 cut(s) | 28, 158, 278, 394, 403, 420 |
| Ksp22I | TGATCA | 2 cut(s) | 271, 373 |
| Kzo9I | GATC | 3 cut(s) | 51, 271, 373 |
| LpnPI | CCDG | 4 cut(s) | 125, 330, 357, 454 |
| LweI | GCATC | 2 cut(s) | 136, 455 |
| MaeIII | GTNAC | 2 cut(s) | 20, 163 |
| MalI | GATC | 3 cut(s) | 53, 273, 375 |
| MboI | GATC | 3 cut(s) | 51, 271, 373 |
| MboII | GAAGA | 2 cut(s) | 226, 335 |
| MfeI | CAATTG | 1 cut(s) | 159 |
| MhlI | GDGCHC | 1 cut(s) | 15 |
| MluCI | AATT | 6 cut(s) | 89, 159, 197, 264, 339, 368 |
| MlyI | GAGTC | 1 cut(s) | 47 |
| MnlI | CCTC | 1 cut(s) | 72 |
| MseI | TTAA | 2 cut(s) | 93, 426 |
| MunI | CAATTG | 1 cut(s) | 159 |
| Mva1269I | GAATGC | 1 cut(s) | 332 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NcoI | CCATGG | 1 cut(s) | 416 |
| NdeII | GATC | 3 cut(s) | 51, 271, 373 |
| NlaIII | CATG | 6 cut(s) | 28, 158, 278, 394, 403, 420 |
| NmuCI | GTSAC | 2 cut(s) | 20, 163 |
| NspI | RCATGY | 2 cut(s) | 28, 158 |
| NspV | TTCGAA | 1 cut(s) | 190 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 332 |
| PfeI | GAWTC | 2 cut(s) | 170, 354 |
| PleI | GAGTC | 1 cut(s) | 46 |
| PpsI | GAGTC | 1 cut(s) | 46 |
| RsaI | GTAC | 2 cut(s) | 47, 439 |
| RsaNI | GTAC | 2 cut(s) | 46, 438 |
| SaqAI | TTAA | 2 cut(s) | 93, 426 |
| Sau3AI | GATC | 3 cut(s) | 51, 271, 373 |
| SchI | GAGTC | 1 cut(s) | 47 |
| SduI | GDGCHC | 1 cut(s) | 15 |
| SetI | ASST | 2 cut(s) | 60, 443 |
| SfaNI | GCATC | 2 cut(s) | 136, 455 |
| SfuI | TTCGAA | 1 cut(s) | 190 |
| Sse9I | AATT | 6 cut(s) | 89, 159, 197, 264, 339, 368 |
| StyI | CCWWGG | 1 cut(s) | 416 |
| TaaI | ACNGT | 1 cut(s) | 307 |
| TaqI | TCGA | 3 cut(s) | 190, 352, 432 |
| TasI | AATT | 6 cut(s) | 89, 159, 197, 264, 339, 368 |
| TatI | WGTACW | 1 cut(s) | 45 |
| TfiI | GAWTC | 2 cut(s) | 170, 354 |
| Tru1I | TTAA | 2 cut(s) | 93, 426 |
| Tru9I | TTAA | 2 cut(s) | 93, 426 |
| TscAI | CASTG | 1 cut(s) | 103 |
| TseFI | GTSAC | 2 cut(s) | 20, 163 |
| Tsp45I | GTSAC | 2 cut(s) | 20, 163 |
| TspDTI | ATGAA | 2 cut(s) | 150, 407 |
| TspRI | CASTG | 1 cut(s) | 103 |
| XapI | RAATTY | 3 cut(s) | 89, 264, 368 |
| XceI | RCATGY | 2 cut(s) | 28, 158 |