G-quadruplex DNA unwinding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 368 |
| AgsI | TTSAA | 8 cut(s) | 38, 47, 240, 262, 313, 323, 358, 368 |
| AluBI | AGCT | 1 cut(s) | 59 |
| AluI | AGCT | 1 cut(s) | 59 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| AoxI | GGCC | 2 cut(s) | 3, 80 |
| ApeKI | GCWGC | 1 cut(s) | 231 |
| ApoI | RAATTY | 1 cut(s) | 368 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 33 |
| AspS9I | GGNCC | 2 cut(s) | 4, 81 |
| BanII | GRGCYC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BbvI | GCAGC | 1 cut(s) | 218 |
| BccI | CCATC | 1 cut(s) | 104 |
| BclI | TGATCA | 1 cut(s) | 271 |
| BisI | GCNGC | 1 cut(s) | 232 |
| BlsI | GCNGC | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 81 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmsI | GCATC | 1 cut(s) | 136 |
| Bpu10I | CCTNAGC | 1 cut(s) | 60 |
| BsaWI | WCCGGW | 1 cut(s) | 297 |
| Bse1I | ACTGG | 1 cut(s) | 182 |
| BseGI | GGATG | 1 cut(s) | 306 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseNI | ACTGG | 1 cut(s) | 182 |
| BseXI | GCAGC | 1 cut(s) | 218 |
| BshFI | GGCC | 2 cut(s) | 5, 82 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 298 |
| BsmI | GAATGC | 1 cut(s) | 353 |
| BsnI | GGCC | 2 cut(s) | 5, 82 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| Bsp143I | GATC | 2 cut(s) | 271, 378 |
| BspANI | GGCC | 2 cut(s) | 5, 82 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BsrI | ACTGG | 1 cut(s) | 182 |
| BssMI | GATC | 2 cut(s) | 271, 378 |
| Bst6I | CTCTTC | 1 cut(s) | 334 |
| BstDEI | CTNAG | 1 cut(s) | 60 |
| BstF5I | GGATG | 1 cut(s) | 306 |
| BstKTI | GATC | 2 cut(s) | 274, 381 |
| BstMBI | GATC | 2 cut(s) | 271, 378 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 65, 155 |
| BstV1I | GCAGC | 1 cut(s) | 218 |
| BsuRI | GGCC | 2 cut(s) | 5, 82 |
| BtgZI | GCGATG | 1 cut(s) | 159 |
| BtsCI | GGATG | 1 cut(s) | 306 |
| BtsIMutI | CAGTG | 2 cut(s) | 335, 379 |
| CciI | TCATGA | 1 cut(s) | 274 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 81 |
| CviAII | CATG | 2 cut(s) | 155, 275 |
| CviJI | RGCY | 4 cut(s) | 5, 59, 82, 115 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 59, 82, 115 |
| DdeI | CTNAG | 1 cut(s) | 60 |
| DpnI | GATC | 2 cut(s) | 273, 380 |
| DpnII | GATC | 2 cut(s) | 271, 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 334 |
| EarI | CTCTTC | 1 cut(s) | 334 |
| Ecl136II | GAGCTC | 1 cut(s) | 59 |
| Eco24I | GRGCYC | 1 cut(s) | 61 |
| Eco53kI | GAGCTC | 1 cut(s) | 59 |
| EcoICRI | GAGCTC | 1 cut(s) | 59 |
| EcoRI | GAATTC | 1 cut(s) | 368 |
| EcoT22I | ATGCAT | 1 cut(s) | 355 |
| EcoT38I | GRGCYC | 1 cut(s) | 61 |
| FaeI | CATG | 2 cut(s) | 158, 278 |
| FatI | CATG | 2 cut(s) | 154, 274 |
| FbaI | TGATCA | 1 cut(s) | 271 |
| Fnu4HI | GCNGC | 1 cut(s) | 232 |
| FokI | GGATG | 1 cut(s) | 313 |
| FriOI | GRGCYC | 1 cut(s) | 61 |
| Fsp4HI | GCNGC | 1 cut(s) | 232 |
| GluI | GCNGC | 1 cut(s) | 232 |
| HaeIII | GGCC | 2 cut(s) | 5, 82 |
| HapII | CCGG | 1 cut(s) | 298 |
| Hin1II | CATG | 2 cut(s) | 158, 278 |
| HinfI | GANTC | 3 cut(s) | 170, 326, 340 |
| HpaII | CCGG | 1 cut(s) | 298 |
| Hpy188III | TCNNGA | 4 cut(s) | 240, 275, 323, 382 |
| HpyAV | CCTTC | 1 cut(s) | 200 |
| HpyCH4V | TGCA | 1 cut(s) | 353 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 65, 155 |
| HpyF3I | CTNAG | 1 cut(s) | 60 |
| Hsp92II | CATG | 2 cut(s) | 158, 278 |
| Ksp22I | TGATCA | 1 cut(s) | 271 |
| Kzo9I | GATC | 2 cut(s) | 271, 378 |
| LpnPI | CCDG | 4 cut(s) | 47, 195, 196, 311 |
| Lsp1109I | GCAGC | 1 cut(s) | 218 |
| LweI | GCATC | 1 cut(s) | 136 |
| MaeIII | GTNAC | 1 cut(s) | 187 |
| MalI | GATC | 2 cut(s) | 273, 380 |
| MboI | GATC | 2 cut(s) | 271, 378 |
| MboII | GAAGA | 2 cut(s) | 59, 321 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 3 cut(s) | 38, 162, 368 |
| MlyI | GAGTC | 1 cut(s) | 320 |
| MnlI | CCTC | 6 cut(s) | 72, 196, 271, 296, 343, 371 |
| Mph1103I | ATGCAT | 1 cut(s) | 355 |
| MroXI | GAANNNNTTC | 1 cut(s) | 33 |
| MseI | TTAA | 1 cut(s) | 294 |
| MspI | CCGG | 1 cut(s) | 298 |
| Mva1269I | GAATGC | 1 cut(s) | 353 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 65, 155 |
| NdeII | GATC | 2 cut(s) | 271, 378 |
| NlaIII | CATG | 2 cut(s) | 158, 278 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NsiI | ATGCAT | 1 cut(s) | 355 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PctI | GAATGC | 1 cut(s) | 353 |
| PdmI | GAANNNNTTC | 1 cut(s) | 33 |
| PfeI | GAWTC | 2 cut(s) | 170, 340 |
| PkrI | GCNGC | 1 cut(s) | 233 |
| PleI | GAGTC | 1 cut(s) | 320 |
| PpsI | GAGTC | 1 cut(s) | 320 |
| Psp124BI | GAGCTC | 1 cut(s) | 61 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 2 cut(s) | 4, 81 |
| SacI | GAGCTC | 1 cut(s) | 61 |
| SaqAI | TTAA | 1 cut(s) | 294 |
| SatI | GCNGC | 1 cut(s) | 232 |
| Sau3AI | GATC | 2 cut(s) | 271, 378 |
| Sau96I | GGNCC | 2 cut(s) | 4, 81 |
| SchI | GAGTC | 1 cut(s) | 320 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 6 cut(s) | 14, 34, 61, 66, 288, 363 |
| SfaNI | GCATC | 1 cut(s) | 136 |
| Sse9I | AATT | 3 cut(s) | 38, 162, 368 |
| SstI | GAGCTC | 1 cut(s) | 61 |
| TaqI | TCGA | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 38, 162, 368 |
| TfiI | GAWTC | 2 cut(s) | 170, 340 |
| Tru1I | TTAA | 1 cut(s) | 294 |
| Tru9I | TTAA | 1 cut(s) | 294 |
| TscAI | CASTG | 2 cut(s) | 342, 379 |
| TseI | GCWGC | 1 cut(s) | 231 |
| TspDTI | ATGAA | 4 cut(s) | 31, 107, 150, 183 |
| TspGWI | ACGGA | 1 cut(s) | 8 |
| TspRI | CASTG | 2 cut(s) | 342, 379 |
| XapI | RAATTY | 1 cut(s) | 368 |
| XmnI | GAANNNNTTC | 1 cut(s) | 33 |
| Zsp2I | ATGCAT | 1 cut(s) | 355 |