DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 4 - 105 | 3.3e-10 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 5 |
| AcsI | RAATTY | 2 cut(s) | 72, 310 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 280, 354 |
| AgsI | TTSAA | 4 cut(s) | 122, 158, 298, 317 |
| AjnI | CCWGG | 1 cut(s) | 325 |
| AluBI | AGCT | 1 cut(s) | 209 |
| AluI | AGCT | 1 cut(s) | 209 |
| Alw26I | GTCTC | 1 cut(s) | 73 |
| AlwI | GGATC | 1 cut(s) | 5 |
| ApoI | RAATTY | 2 cut(s) | 72, 310 |
| AspLEI | GCGC | 2 cut(s) | 196, 286 |
| AsuHPI | GGTGA | 1 cut(s) | 21 |
| AxyI | CCTNAGG | 1 cut(s) | 84 |
| BbsI | GAAGAC | 2 cut(s) | 110, 378 |
| BciT130I | CCWGG | 1 cut(s) | 327 |
| BcoDI | GTCTC | 1 cut(s) | 73 |
| Bme1390I | CCNGG | 1 cut(s) | 327 |
| BmrFI | CCNGG | 1 cut(s) | 327 |
| BmsI | GCATC | 2 cut(s) | 139, 402 |
| BpiI | GAAGAC | 2 cut(s) | 110, 378 |
| Bsa29I | ATCGAT | 1 cut(s) | 396 |
| BsaI | GGTCTC | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 280, 354 |
| Bse1I | ACTGG | 1 cut(s) | 243 |
| Bse21I | CCTNAGG | 1 cut(s) | 84 |
| BseBI | CCWGG | 1 cut(s) | 327 |
| BseCI | ATCGAT | 1 cut(s) | 396 |
| BseGI | GGATG | 1 cut(s) | 334 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 280, 354 |
| BseNI | ACTGG | 1 cut(s) | 243 |
| BshVI | ATCGAT | 1 cut(s) | 396 |
| BslFI | GGGAC | 1 cut(s) | 257 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 280, 354 |
| BsmAI | GTCTC | 1 cut(s) | 73 |
| BsmFI | GGGAC | 1 cut(s) | 257 |
| Bso31I | GGTCTC | 1 cut(s) | 73 |
| Bsp143I | GATC | 4 cut(s) | 10, 51, 225, 397 |
| BspDI | ATCGAT | 1 cut(s) | 396 |
| BspPI | GGATC | 1 cut(s) | 5 |
| BspTNI | GGTCTC | 1 cut(s) | 73 |
| BsrI | ACTGG | 1 cut(s) | 243 |
| BssMI | GATC | 4 cut(s) | 10, 51, 225, 397 |
| Bst2UI | CCWGG | 1 cut(s) | 327 |
| Bst4CI | ACNGT | 1 cut(s) | 258 |
| Bst6I | CTCTTC | 1 cut(s) | 312 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstF5I | GGATG | 1 cut(s) | 334 |
| BstHHI | GCGC | 2 cut(s) | 196, 286 |
| BstKTI | GATC | 4 cut(s) | 13, 54, 228, 400 |
| BstMAI | GTCTC | 1 cut(s) | 73 |
| BstMBI | GATC | 4 cut(s) | 10, 51, 225, 397 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstNI | CCWGG | 1 cut(s) | 327 |
| BstSCI | CCNGG | 1 cut(s) | 325 |
| BstV2I | GAAGAC | 2 cut(s) | 110, 378 |
| BstX2I | RGATCY | 1 cut(s) | 10 |
| BstYI | RGATCY | 1 cut(s) | 10 |
| Bsu15I | ATCGAT | 1 cut(s) | 396 |
| Bsu36I | CCTNAGG | 1 cut(s) | 84 |
| BsuTUI | ATCGAT | 1 cut(s) | 396 |
| BtsCI | GGATG | 1 cut(s) | 334 |
| CfoI | GCGC | 2 cut(s) | 196, 286 |
| ClaI | ATCGAT | 1 cut(s) | 396 |
| CviAII | CATG | 2 cut(s) | 215, 278 |
| CviJI | RGCY | 2 cut(s) | 161, 209 |
| CviKI_1 | RGCY | 2 cut(s) | 161, 209 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| DpnI | GATC | 4 cut(s) | 12, 53, 227, 399 |
| DpnII | GATC | 4 cut(s) | 10, 51, 225, 397 |
| Eam1104I | CTCTTC | 1 cut(s) | 312 |
| EarI | CTCTTC | 1 cut(s) | 312 |
| Eco31I | GGTCTC | 1 cut(s) | 73 |
| Eco81I | CCTNAGG | 1 cut(s) | 84 |
| EcoRII | CCWGG | 1 cut(s) | 325 |
| FaeI | CATG | 2 cut(s) | 218, 281 |
| FaqI | GGGAC | 1 cut(s) | 257 |
| FatI | CATG | 2 cut(s) | 214, 277 |
| FokI | GGATG | 1 cut(s) | 321 |
| GlaI | GCGC | 2 cut(s) | 195, 285 |
| HhaI | GCGC | 2 cut(s) | 196, 286 |
| Hin1II | CATG | 2 cut(s) | 218, 281 |
| Hin6I | GCGC | 2 cut(s) | 194, 284 |
| HinP1I | GCGC | 2 cut(s) | 194, 284 |
| HincII | GTYRAC | 1 cut(s) | 136 |
| HindII | GTYRAC | 1 cut(s) | 136 |
| HinfI | GANTC | 1 cut(s) | 57 |
| HphI | GGTGA | 1 cut(s) | 21 |
| Hpy166II | GTNNAC | 2 cut(s) | 136, 254 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 56 |
| Hpy8I | GTNNAC | 2 cut(s) | 136, 254 |
| HpyCH4III | ACNGT | 1 cut(s) | 258 |
| HpyCH4V | TGCA | 1 cut(s) | 152 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| Hsp92II | CATG | 2 cut(s) | 218, 281 |
| HspAI | GCGC | 2 cut(s) | 194, 284 |
| Kzo9I | GATC | 4 cut(s) | 10, 51, 225, 397 |
| LpnPI | CCDG | 3 cut(s) | 256, 312, 339 |
| LweI | GCATC | 2 cut(s) | 139, 402 |
| MalI | GATC | 4 cut(s) | 12, 53, 227, 399 |
| MboI | GATC | 4 cut(s) | 10, 51, 225, 397 |
| MboII | GAAGA | 5 cut(s) | 61, 110, 286, 329, 378 |
| MfeI | CAATTG | 1 cut(s) | 380 |
| MflI | RGATCY | 1 cut(s) | 10 |
| MluCI | AATT | 7 cut(s) | 72, 153, 174, 201, 267, 310, 380 |
| MlyI | GAGTC | 1 cut(s) | 66 |
| MnlI | CCTC | 3 cut(s) | 172, 274, 358 |
| MseI | TTAA | 2 cut(s) | 42, 204 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| MspR9I | CCNGG | 1 cut(s) | 327 |
| MunI | CAATTG | 1 cut(s) | 380 |
| MvaI | CCWGG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NdeII | GATC | 4 cut(s) | 10, 51, 225, 397 |
| NlaIII | CATG | 2 cut(s) | 218, 281 |
| PleI | GAGTC | 1 cut(s) | 65 |
| PpsI | GAGTC | 1 cut(s) | 65 |
| Psp6I | CCWGG | 1 cut(s) | 325 |
| PspGI | CCWGG | 1 cut(s) | 325 |
| PsuI | RGATCY | 1 cut(s) | 10 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SaqAI | TTAA | 2 cut(s) | 42, 204 |
| Sau3AI | GATC | 4 cut(s) | 10, 51, 225, 397 |
| SchI | GAGTC | 1 cut(s) | 66 |
| ScrFI | CCNGG | 1 cut(s) | 327 |
| SetI | ASST | 6 cut(s) | 34, 85, 90, 211, 331, 421 |
| SfaNI | GCATC | 2 cut(s) | 139, 402 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| Sse9I | AATT | 7 cut(s) | 72, 153, 174, 201, 267, 310, 380 |
| StyD4I | CCNGG | 1 cut(s) | 325 |
| TaaI | ACNGT | 1 cut(s) | 258 |
| TaqI | TCGA | 1 cut(s) | 396 |
| TasI | AATT | 7 cut(s) | 72, 153, 174, 201, 267, 310, 380 |
| Tru1I | TTAA | 2 cut(s) | 42, 204 |
| Tru9I | TTAA | 2 cut(s) | 42, 204 |
| TspDTI | ATGAA | 2 cut(s) | 158, 323 |
| TspGWI | ACGGA | 1 cut(s) | 50 |
| XapI | RAATTY | 2 cut(s) | 72, 310 |