DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 44 - 107 | 2.7e-06 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 137 |
| AgsI | TTSAA | 1 cut(s) | 108 |
| AjnI | CCWGG | 1 cut(s) | 294 |
| ApeKI | GCWGC | 1 cut(s) | 77 |
| AsuHPI | GGTGA | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 149 |
| BciT130I | CCWGG | 1 cut(s) | 296 |
| BclI | TGATCA | 2 cut(s) | 271, 316 |
| BisI | GCNGC | 1 cut(s) | 78 |
| BlsI | GCNGC | 1 cut(s) | 79 |
| Bme1390I | CCNGG | 1 cut(s) | 296 |
| BmrFI | CCNGG | 1 cut(s) | 296 |
| BmsI | GCATC | 2 cut(s) | 181, 256 |
| BsaBI | GATNNNNATC | 1 cut(s) | 270 |
| Bse3DI | GCAATG | 1 cut(s) | 170 |
| Bse8I | GATNNNNATC | 1 cut(s) | 270 |
| BseBI | CCWGG | 1 cut(s) | 296 |
| BseJI | GATNNNNATC | 1 cut(s) | 270 |
| BseMI | GCAATG | 1 cut(s) | 170 |
| BseRI | GAGGAG | 3 cut(s) | 61, 66, 69 |
| BseXI | GCAGC | 1 cut(s) | 64 |
| Bsp143I | GATC | 2 cut(s) | 271, 316 |
| BspQI | GCTCTTC | 1 cut(s) | 87 |
| BsrDI | GCAATG | 1 cut(s) | 170 |
| BssMI | GATC | 2 cut(s) | 271, 316 |
| Bst2UI | CCWGG | 1 cut(s) | 296 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 200 |
| BstKTI | GATC | 2 cut(s) | 274, 319 |
| BstMBI | GATC | 2 cut(s) | 271, 316 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 22, 200 |
| BstNI | CCWGG | 1 cut(s) | 296 |
| BstSCI | CCNGG | 1 cut(s) | 294 |
| BstV1I | GCAGC | 1 cut(s) | 64 |
| Csp6I | GTAC | 1 cut(s) | 136 |
| CviAII | CATG | 3 cut(s) | 17, 89, 200 |
| CviJI | RGCY | 2 cut(s) | 77, 294 |
| CviKI_1 | RGCY | 2 cut(s) | 77, 294 |
| CviQI | GTAC | 1 cut(s) | 136 |
| DpnI | GATC | 2 cut(s) | 273, 318 |
| DpnII | GATC | 2 cut(s) | 271, 316 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| EcoRII | CCWGG | 1 cut(s) | 294 |
| FaeI | CATG | 3 cut(s) | 20, 92, 203 |
| FaiI | YATR | 6 cut(s) | 12, 18, 27, 90, 201, 264 |
| FatI | CATG | 3 cut(s) | 16, 88, 199 |
| FbaI | TGATCA | 2 cut(s) | 271, 316 |
| Fnu4HI | GCNGC | 1 cut(s) | 78 |
| Fsp4HI | GCNGC | 1 cut(s) | 78 |
| GluI | GCNGC | 1 cut(s) | 78 |
| Hin1II | CATG | 3 cut(s) | 20, 92, 203 |
| HinfI | GANTC | 1 cut(s) | 215 |
| HphI | GGTGA | 1 cut(s) | 200 |
| Hpy188I | TCNGA | 1 cut(s) | 220 |
| Hpy188III | TCNNGA | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 4 cut(s) | 163, 194, 203, 247 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 22, 200 |
| Hsp92II | CATG | 3 cut(s) | 20, 92, 203 |
| Ksp22I | TGATCA | 2 cut(s) | 271, 316 |
| Kzo9I | GATC | 2 cut(s) | 271, 316 |
| LguI | GCTCTTC | 1 cut(s) | 87 |
| LpnPI | CCDG | 2 cut(s) | 281, 308 |
| Lsp1109I | GCAGC | 1 cut(s) | 64 |
| LweI | GCATC | 2 cut(s) | 181, 256 |
| MaeIII | GTNAC | 2 cut(s) | 208, 302 |
| MalI | GATC | 2 cut(s) | 273, 318 |
| MboI | GATC | 2 cut(s) | 271, 316 |
| MboII | GAAGA | 2 cut(s) | 74, 112 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MluCI | AATT | 4 cut(s) | 93, 204, 242, 309 |
| MnlI | CCTC | 5 cut(s) | 39, 44, 47, 50, 60 |
| MseI | TTAA | 1 cut(s) | 322 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspR9I | CCNGG | 1 cut(s) | 296 |
| MunI | CAATTG | 1 cut(s) | 204 |
| MvaI | CCWGG | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 22, 200 |
| NdeII | GATC | 2 cut(s) | 271, 316 |
| NlaIII | CATG | 3 cut(s) | 20, 92, 203 |
| PciSI | GCTCTTC | 1 cut(s) | 87 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PkrI | GCNGC | 1 cut(s) | 79 |
| Psp6I | CCWGG | 1 cut(s) | 294 |
| PspGI | CCWGG | 1 cut(s) | 294 |
| RsaI | GTAC | 1 cut(s) | 137 |
| RsaNI | GTAC | 1 cut(s) | 136 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SapI | GCTCTTC | 1 cut(s) | 87 |
| SaqAI | TTAA | 1 cut(s) | 322 |
| SatI | GCNGC | 1 cut(s) | 78 |
| Sau3AI | GATC | 2 cut(s) | 271, 316 |
| ScrFI | CCNGG | 1 cut(s) | 296 |
| SfaNI | GCATC | 2 cut(s) | 181, 256 |
| SgeI | CNNG | 9 cut(s) | 29, 101, 127, 212, 241, 263, 297, 307, 308 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| Sse9I | AATT | 4 cut(s) | 93, 204, 242, 309 |
| SspI | AATATT | 1 cut(s) | 142 |
| StyD4I | CCNGG | 1 cut(s) | 294 |
| TasI | AATT | 4 cut(s) | 93, 204, 242, 309 |
| TatI | WGTACW | 1 cut(s) | 135 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| Tru1I | TTAA | 1 cut(s) | 322 |
| Tru9I | TTAA | 1 cut(s) | 322 |
| TseI | GCWGC | 1 cut(s) | 77 |
| TspDTI | ATGAA | 5 cut(s) | 17, 33, 105, 188, 195 |