DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 201 |
| AccB1I | GGYRCC | 1 cut(s) | 828 |
| AciI | CCGC | 1 cut(s) | 24 |
| AclWI | GGATC | 3 cut(s) | 56, 69, 495 |
| AcsI | RAATTY | 1 cut(s) | 498 |
| AfaI | GTAC | 1 cut(s) | 140 |
| AflIII | ACRYGT | 1 cut(s) | 326 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 300, 332 |
| Alw26I | GTCTC | 2 cut(s) | 734, 752 |
| AlwI | GGATC | 3 cut(s) | 56, 69, 495 |
| ApeKI | GCWGC | 1 cut(s) | 101 |
| ApoI | RAATTY | 1 cut(s) | 498 |
| AsuHPI | GGTGA | 2 cut(s) | 494, 676 |
| BamHI | GGATCC | 1 cut(s) | 61 |
| BanI | GGYRCC | 1 cut(s) | 828 |
| BbvI | GCAGC | 1 cut(s) | 113 |
| BccI | CCATC | 2 cut(s) | 293, 813 |
| BceAI | ACGGC | 1 cut(s) | 145 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 263, 297 |
| BciVI | GTATCC | 1 cut(s) | 722 |
| BcoDI | GTCTC | 2 cut(s) | 734, 752 |
| BfuAI | ACCTGC | 1 cut(s) | 201 |
| BfuI | GTATCC | 1 cut(s) | 722 |
| BisI | GCNGC | 2 cut(s) | 24, 102 |
| BlsI | GCNGC | 2 cut(s) | 25, 103 |
| BmiI | GGNNCC | 3 cut(s) | 63, 663, 830 |
| BmsI | GCATC | 2 cut(s) | 10, 253 |
| BpuEI | CTTGAG | 1 cut(s) | 584 |
| BsaBI | GATNNNNATC | 1 cut(s) | 66 |
| BsaI | GGTCTC | 2 cut(s) | 734, 752 |
| BsaJI | CCNNGG | 1 cut(s) | 544 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 372, 402 |
| Bse1I | ACTGG | 1 cut(s) | 665 |
| Bse8I | GATNNNNATC | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 544 |
| BseGI | GGATG | 2 cut(s) | 25, 468 |
| BseJI | GATNNNNATC | 1 cut(s) | 66 |
| BseMII | CTCAG | 2 cut(s) | 436, 618 |
| BseNI | ACTGG | 1 cut(s) | 665 |
| BseXI | GCAGC | 1 cut(s) | 113 |
| BsgI | GTGCAG | 1 cut(s) | 115 |
| BshNI | GGYRCC | 1 cut(s) | 828 |
| BsmAI | GTCTC | 2 cut(s) | 734, 752 |
| Bso31I | GGTCTC | 2 cut(s) | 734, 752 |
| Bsp143I | GATC | 3 cut(s) | 10, 61, 487 |
| BspACI | CCGC | 1 cut(s) | 24 |
| BspCNI | CTCAG | 2 cut(s) | 435, 619 |
| BspHI | TCATGA | 1 cut(s) | 565 |
| BspLI | GGNNCC | 3 cut(s) | 63, 663, 830 |
| BspMI | ACCTGC | 1 cut(s) | 201 |
| BspPI | GGATC | 3 cut(s) | 56, 69, 495 |
| BspT107I | GGYRCC | 1 cut(s) | 828 |
| BspTNI | GGTCTC | 2 cut(s) | 734, 752 |
| BsrI | ACTGG | 1 cut(s) | 665 |
| BssECI | CCNNGG | 1 cut(s) | 544 |
| BssMI | GATC | 3 cut(s) | 10, 61, 487 |
| BssT1I | CCWWGG | 1 cut(s) | 544 |
| Bst4CI | ACNGT | 3 cut(s) | 114, 478, 734 |
| Bst6I | CTCTTC | 2 cut(s) | 732, 750 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 107 |
| BstDEI | CTNAG | 2 cut(s) | 422, 627 |
| BstF5I | GGATG | 2 cut(s) | 25, 468 |
| BstKTI | GATC | 3 cut(s) | 13, 64, 490 |
| BstMAI | GTCTC | 2 cut(s) | 734, 752 |
| BstMBI | GATC | 3 cut(s) | 10, 61, 487 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 107 |
| BstNSI | RCATGY | 2 cut(s) | 150, 330 |
| BstV1I | GCAGC | 1 cut(s) | 113 |
| BstX2I | RGATCY | 1 cut(s) | 61 |
| BstYI | RGATCY | 1 cut(s) | 61 |
| BsuI | GTATCC | 1 cut(s) | 722 |
| BtsCI | GGATG | 2 cut(s) | 25, 468 |
| BtsIMutI | CAGTG | 1 cut(s) | 739 |
| BveI | ACCTGC | 1 cut(s) | 201 |
| CciI | TCATGA | 1 cut(s) | 565 |
| Csp6I | GTAC | 1 cut(s) | 139 |
| CviAII | CATG | 5 cut(s) | 147, 327, 566, 579, 812 |
| CviJI | RGCY | 4 cut(s) | 132, 181, 305, 664 |
| CviKI_1 | RGCY | 4 cut(s) | 132, 181, 305, 664 |
| CviQI | GTAC | 1 cut(s) | 139 |
| DdeI | CTNAG | 2 cut(s) | 422, 627 |
| DpnI | GATC | 3 cut(s) | 12, 63, 489 |
| DpnII | GATC | 3 cut(s) | 10, 61, 487 |
| Eam1104I | CTCTTC | 2 cut(s) | 732, 750 |
| EarI | CTCTTC | 2 cut(s) | 732, 750 |
| Eco130I | CCWWGG | 1 cut(s) | 544 |
| Eco31I | GGTCTC | 2 cut(s) | 734, 752 |
| EcoT14I | CCWWGG | 1 cut(s) | 544 |
| EcoT22I | ATGCAT | 1 cut(s) | 751 |
| ErhI | CCWWGG | 1 cut(s) | 544 |
| FaeI | CATG | 5 cut(s) | 150, 330, 569, 582, 815 |
| FaiI | YATR | 9 cut(s) | 148, 293, 328, 558, 560, 567, 580, 747, 813 |
| FatI | CATG | 5 cut(s) | 146, 326, 565, 578, 811 |
| FauNDI | CATATG | 1 cut(s) | 558 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 102 |
| FokI | GGATG | 2 cut(s) | 32, 455 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 102 |
| GluI | GCNGC | 2 cut(s) | 24, 102 |
| Hin1II | CATG | 5 cut(s) | 150, 330, 569, 582, 815 |
| HinfI | GANTC | 2 cut(s) | 321, 676 |
| HphI | GGTGA | 2 cut(s) | 494, 676 |
| Hpy166II | GTNNAC | 1 cut(s) | 332 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 392, 425 |
| Hpy188III | TCNNGA | 3 cut(s) | 257, 566, 601 |
| Hpy8I | GTNNAC | 1 cut(s) | 332 |
| HpyAV | CCTTC | 2 cut(s) | 516, 624 |
| HpyCH4III | ACNGT | 3 cut(s) | 114, 478, 734 |
| HpyCH4V | TGCA | 5 cut(s) | 96, 110, 582, 749, 815 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 107 |
| HpyF3I | CTNAG | 2 cut(s) | 422, 627 |
| Hsp92II | CATG | 5 cut(s) | 150, 330, 569, 582, 815 |
| Kzo9I | GATC | 3 cut(s) | 10, 61, 487 |
| LmnI | GCTCC | 1 cut(s) | 661 |
| LpnPI | CCDG | 5 cut(s) | 21, 118, 182, 206, 678 |
| Lsp1109I | GCAGC | 1 cut(s) | 113 |
| LweI | GCATC | 2 cut(s) | 10, 253 |
| MaeIII | GTNAC | 6 cut(s) | 125, 188, 359, 443, 539, 573 |
| MalI | GATC | 3 cut(s) | 12, 63, 489 |
| MboI | GATC | 3 cut(s) | 10, 61, 487 |
| MboII | GAAGA | 5 cut(s) | 272, 320, 562, 749, 767 |
| MfeI | CAATTG | 2 cut(s) | 14, 47 |
| MflI | RGATCY | 1 cut(s) | 61 |
| MluCI | AATT | 6 cut(s) | 14, 47, 252, 335, 371, 498 |
| MlyI | GAGTC | 1 cut(s) | 685 |
| MmeI | TCCRAC | 3 cut(s) | 230, 442, 647 |
| MnlI | CCTC | 4 cut(s) | 192, 697, 816, 819 |
| Mph1103I | ATGCAT | 1 cut(s) | 751 |
| MseI | TTAA | 3 cut(s) | 251, 438, 835 |
| MslI | CAYNNNNRTG | 1 cut(s) | 91 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MunI | CAATTG | 2 cut(s) | 14, 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 107 |
| NdeI | CATATG | 1 cut(s) | 558 |
| NdeII | GATC | 3 cut(s) | 10, 61, 487 |
| NlaIII | CATG | 5 cut(s) | 150, 330, 569, 582, 815 |
| NlaIV | GGNNCC | 3 cut(s) | 63, 663, 830 |
| NmuCI | GTSAC | 3 cut(s) | 188, 359, 443 |
| NsiI | ATGCAT | 1 cut(s) | 751 |
| NspI | RCATGY | 2 cut(s) | 150, 330 |
| PagI | TCATGA | 1 cut(s) | 565 |
| PciI | ACATGT | 1 cut(s) | 326 |
| PfeI | GAWTC | 1 cut(s) | 321 |
| PkrI | GCNGC | 2 cut(s) | 25, 103 |
| PleI | GAGTC | 1 cut(s) | 684 |
| PpsI | GAGTC | 1 cut(s) | 684 |
| PscI | ACATGT | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 3 cut(s) | 63, 663, 830 |
| PsuI | RGATCY | 1 cut(s) | 61 |
| RsaI | GTAC | 1 cut(s) | 140 |
| RsaNI | GTAC | 1 cut(s) | 139 |
| RseI | CAYNNNNRTG | 1 cut(s) | 91 |
| SaqAI | TTAA | 3 cut(s) | 251, 438, 835 |
| SatI | GCNGC | 2 cut(s) | 24, 102 |
| Sau3AI | GATC | 3 cut(s) | 10, 61, 487 |
| SchI | GAGTC | 1 cut(s) | 685 |
| SetI | ASST | 7 cut(s) | 195, 298, 403, 546, 616, 689, 746 |
| SfaNI | GCATC | 2 cut(s) | 10, 253 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 91 |
| SmlI | CTYRAG | 1 cut(s) | 599 |
| SmoI | CTYRAG | 1 cut(s) | 599 |
| Sse9I | AATT | 6 cut(s) | 14, 47, 252, 335, 371, 498 |
| SsiI | CCGC | 1 cut(s) | 24 |
| StyI | CCWWGG | 1 cut(s) | 544 |
| TaaI | ACNGT | 3 cut(s) | 114, 478, 734 |
| TaqII | GACCGA | 1 cut(s) | 776 |
| TasI | AATT | 6 cut(s) | 14, 47, 252, 335, 371, 498 |
| TauI | GCSGC | 1 cut(s) | 26 |
| TfiI | GAWTC | 1 cut(s) | 321 |
| Tru1I | TTAA | 3 cut(s) | 251, 438, 835 |
| Tru9I | TTAA | 3 cut(s) | 251, 438, 835 |
| TscAI | CASTG | 1 cut(s) | 739 |
| TseFI | GTSAC | 3 cut(s) | 188, 359, 443 |
| TseI | GCWGC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 3 cut(s) | 188, 359, 443 |
| TspDTI | ATGAA | 5 cut(s) | 543, 554, 582, 606, 791 |
| TspRI | CASTG | 1 cut(s) | 739 |
| XapI | RAATTY | 1 cut(s) | 498 |
| XceI | RCATGY | 2 cut(s) | 150, 330 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 425 |
| Zsp2I | ATGCAT | 1 cut(s) | 751 |