DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 363 |
| Acc36I | ACCTGC | 1 cut(s) | 363 |
| AciI | CCGC | 2 cut(s) | 91, 364 |
| AdeI | CACNNNGTG | 1 cut(s) | 299 |
| AfaI | GTAC | 2 cut(s) | 132, 287 |
| AflII | CTTAAG | 1 cut(s) | 379 |
| AgsI | TTSAA | 2 cut(s) | 68, 255 |
| AluBI | AGCT | 2 cut(s) | 105, 120 |
| AluI | AGCT | 2 cut(s) | 105, 120 |
| Alw26I | GTCTC | 1 cut(s) | 299 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 429 |
| BbsI | GAAGAC | 1 cut(s) | 230 |
| BceAI | ACGGC | 1 cut(s) | 234 |
| BciVI | GTATCC | 1 cut(s) | 404 |
| BcoDI | GTCTC | 1 cut(s) | 299 |
| BfmI | CTRYAG | 2 cut(s) | 106, 232 |
| BfrI | CTTAAG | 1 cut(s) | 379 |
| BfuAI | ACCTGC | 1 cut(s) | 363 |
| BfuI | GTATCC | 1 cut(s) | 404 |
| BisI | GCNGC | 1 cut(s) | 91 |
| BlsI | GCNGC | 1 cut(s) | 92 |
| BmsI | GCATC | 2 cut(s) | 62, 321 |
| BoxI | GACNNNNGTC | 1 cut(s) | 234 |
| BpiI | GAAGAC | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 1 cut(s) | 16 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 333, 363 |
| Bse1I | ACTGG | 1 cut(s) | 163 |
| Bse3DI | GCAATG | 1 cut(s) | 211 |
| BseDI | CCNNGG | 1 cut(s) | 16 |
| BseGI | GGATG | 1 cut(s) | 53 |
| BseMI | GCAATG | 1 cut(s) | 211 |
| BseMII | CTCAG | 1 cut(s) | 285 |
| BseNI | ACTGG | 1 cut(s) | 163 |
| BsgI | GTGCAG | 2 cut(s) | 126, 341 |
| BsmAI | GTCTC | 1 cut(s) | 299 |
| BsmBI | CGTCTC | 1 cut(s) | 299 |
| Bsp1407I | TGTACA | 1 cut(s) | 285 |
| Bsp143I | GATC | 1 cut(s) | 225 |
| BspACI | CCGC | 2 cut(s) | 91, 364 |
| BspCNI | CTCAG | 1 cut(s) | 284 |
| BspMI | ACCTGC | 1 cut(s) | 363 |
| BspTI | CTTAAG | 1 cut(s) | 379 |
| BsrDI | GCAATG | 1 cut(s) | 211 |
| BsrGI | TGTACA | 1 cut(s) | 285 |
| BsrI | ACTGG | 1 cut(s) | 163 |
| BssECI | CCNNGG | 1 cut(s) | 16 |
| BssMI | GATC | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 2 cut(s) | 236, 321 |
| BstAFI | CTTAAG | 1 cut(s) | 379 |
| BstAUI | TGTACA | 1 cut(s) | 285 |
| BstC8I | GCNNGC | 3 cut(s) | 113, 247, 315 |
| BstDEI | CTNAG | 1 cut(s) | 271 |
| BstDSI | CCRYGG | 1 cut(s) | 16 |
| BstEII | GGTNACC | 1 cut(s) | 384 |
| BstF5I | GGATG | 1 cut(s) | 53 |
| BstKTI | GATC | 1 cut(s) | 228 |
| BstMAI | GTCTC | 1 cut(s) | 299 |
| BstMBI | GATC | 1 cut(s) | 225 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 117 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 234 |
| BstPI | GGTNACC | 1 cut(s) | 384 |
| BstSFI | CTRYAG | 2 cut(s) | 106, 232 |
| BstV2I | GAAGAC | 1 cut(s) | 230 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 158 |
| BsuI | GTATCC | 1 cut(s) | 404 |
| BtgI | CCRYGG | 1 cut(s) | 16 |
| BtsCI | GGATG | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 1 cut(s) | 156 |
| BveI | ACCTGC | 1 cut(s) | 363 |
| Cac8I | GCNNGC | 3 cut(s) | 113, 247, 315 |
| Csp6I | GTAC | 2 cut(s) | 131, 286 |
| CviJI | RGCY | 9 cut(s) | 90, 105, 111, 115, 120, 197, 249, 377, 462 |
| CviKI_1 | RGCY | 9 cut(s) | 90, 105, 111, 115, 120, 197, 249, 377, 462 |
| CviQI | GTAC | 2 cut(s) | 131, 286 |
| DdeI | CTNAG | 1 cut(s) | 271 |
| DpnI | GATC | 1 cut(s) | 227 |
| DpnII | GATC | 1 cut(s) | 225 |
| DraIII | CACNNNGTG | 1 cut(s) | 299 |
| Eco32I | GATATC | 1 cut(s) | 452 |
| Eco91I | GGTNACC | 1 cut(s) | 384 |
| EcoO65I | GGTNACC | 1 cut(s) | 384 |
| EcoRV | GATATC | 1 cut(s) | 452 |
| Esp3I | CGTCTC | 1 cut(s) | 299 |
| FaiI | YATR | 5 cut(s) | 26, 77, 79, 81, 411 |
| Fnu4HI | GCNGC | 1 cut(s) | 91 |
| FokI | GGATG | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 1 cut(s) | 91 |
| GluI | GCNGC | 1 cut(s) | 91 |
| HinfI | GANTC | 2 cut(s) | 21, 443 |
| Hpy188I | TCNGA | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 3 cut(s) | 185, 440, 447 |
| HpyAV | CCTTC | 1 cut(s) | 440 |
| HpyCH4III | ACNGT | 2 cut(s) | 236, 321 |
| HpyCH4IV | ACGT | 1 cut(s) | 308 |
| HpyCH4V | TGCA | 5 cut(s) | 11, 143, 313, 358, 409 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 117 |
| HpyF3I | CTNAG | 1 cut(s) | 271 |
| HpySE526I | ACGT | 1 cut(s) | 308 |
| Kzo9I | GATC | 1 cut(s) | 225 |
| LweI | GCATC | 2 cut(s) | 62, 321 |
| MaeII | ACGT | 1 cut(s) | 308 |
| MaeIII | GTNAC | 2 cut(s) | 291, 384 |
| MalI | GATC | 1 cut(s) | 227 |
| MboI | GATC | 1 cut(s) | 225 |
| MboII | GAAGA | 2 cut(s) | 230, 292 |
| MluCI | AATT | 2 cut(s) | 188, 404 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 4 cut(s) | 208, 278, 359, 452 |
| MroXI | GAANNNNTTC | 1 cut(s) | 429 |
| MseI | TTAA | 3 cut(s) | 174, 323, 380 |
| MspCI | CTTAAG | 1 cut(s) | 379 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 117 |
| NdeII | GATC | 1 cut(s) | 225 |
| NmuCI | GTSAC | 1 cut(s) | 291 |
| PaqCI | CACCTGC | 1 cut(s) | 363 |
| PdmI | GAANNNNTTC | 1 cut(s) | 429 |
| PfeI | GAWTC | 2 cut(s) | 21, 443 |
| PkrI | GCNGC | 1 cut(s) | 92 |
| PshAI | GACNNNNGTC | 1 cut(s) | 234 |
| PspEI | GGTNACC | 1 cut(s) | 384 |
| RsaI | GTAC | 2 cut(s) | 132, 287 |
| RsaNI | GTAC | 2 cut(s) | 131, 286 |
| SaqAI | TTAA | 3 cut(s) | 174, 323, 380 |
| SatI | GCNGC | 1 cut(s) | 91 |
| Sau3AI | GATC | 1 cut(s) | 225 |
| SetI | ASST | 7 cut(s) | 107, 122, 311, 351, 357, 386, 432 |
| SfaNI | GCATC | 2 cut(s) | 62, 321 |
| SfcI | CTRYAG | 2 cut(s) | 106, 232 |
| SmlI | CTYRAG | 1 cut(s) | 379 |
| SmoI | CTYRAG | 1 cut(s) | 379 |
| Sse9I | AATT | 2 cut(s) | 188, 404 |
| SsiI | CCGC | 2 cut(s) | 91, 364 |
| TaaI | ACNGT | 2 cut(s) | 236, 321 |
| TaiI | ACGT | 1 cut(s) | 311 |
| TaqI | TCGA | 1 cut(s) | 228 |
| TasI | AATT | 2 cut(s) | 188, 404 |
| TatI | WGTACW | 1 cut(s) | 285 |
| TauI | GCSGC | 1 cut(s) | 93 |
| TfiI | GAWTC | 2 cut(s) | 21, 443 |
| Tru1I | TTAA | 3 cut(s) | 174, 323, 380 |
| Tru9I | TTAA | 3 cut(s) | 174, 323, 380 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseFI | GTSAC | 1 cut(s) | 291 |
| Tsp45I | GTSAC | 1 cut(s) | 291 |
| TspDTI | ATGAA | 3 cut(s) | 13, 17, 96 |
| TspGWI | ACGGA | 1 cut(s) | 33 |
| TspRI | CASTG | 1 cut(s) | 163 |
| Vha464I | CTTAAG | 1 cut(s) | 379 |
| XmnI | GAANNNNTTC | 1 cut(s) | 429 |