DNA recombination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 12 |
| AclWI | GGATC | 4 cut(s) | 15, 131, 374, 387 |
| AfaI | GTAC | 1 cut(s) | 374 |
| AflIII | ACRYGT | 1 cut(s) | 356 |
| AgsI | TTSAA | 2 cut(s) | 101, 119 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 43, 75 |
| AluBI | AGCT | 3 cut(s) | 33, 129, 227 |
| AluI | AGCT | 3 cut(s) | 33, 129, 227 |
| AlwI | GGATC | 4 cut(s) | 15, 131, 374, 387 |
| AoxI | GGCC | 1 cut(s) | 35 |
| ApeKI | GCWGC | 1 cut(s) | 344 |
| AsuHPI | GGTGA | 2 cut(s) | 32, 121 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 375, 408 |
| BamHI | GGATCC | 1 cut(s) | 379 |
| BbvI | GCAGC | 1 cut(s) | 331 |
| BccI | CCATC | 1 cut(s) | 202 |
| BfaI | CTAG | 1 cut(s) | 30 |
| BfuAI | ACCTGC | 1 cut(s) | 12 |
| BisI | GCNGC | 1 cut(s) | 345 |
| BlsI | GCNGC | 1 cut(s) | 346 |
| BmiI | GGNNCC | 1 cut(s) | 381 |
| BmsI | GCATC | 1 cut(s) | 311 |
| BsaJI | CCNNGG | 1 cut(s) | 434 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 43, 73 |
| BseDI | CCNNGG | 1 cut(s) | 434 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseXI | GCAGC | 1 cut(s) | 331 |
| BshFI | GGCC | 1 cut(s) | 37 |
| BsnI | GGCC | 1 cut(s) | 37 |
| Bsp1407I | TGTACA | 1 cut(s) | 372 |
| Bsp143I | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| BspANI | GGCC | 1 cut(s) | 37 |
| BspLI | GGNNCC | 1 cut(s) | 381 |
| BspMI | ACCTGC | 1 cut(s) | 12 |
| BspPI | GGATC | 4 cut(s) | 15, 131, 374, 387 |
| BsrGI | TGTACA | 1 cut(s) | 372 |
| BssECI | CCNNGG | 1 cut(s) | 434 |
| BssMI | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| BssT1I | CCWWGG | 1 cut(s) | 434 |
| Bst4CI | ACNGT | 1 cut(s) | 17 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 163 |
| BstAUI | TGTACA | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 2 cut(s) | 35, 349 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstKTI | GATC | 5 cut(s) | 10, 139, 243, 382, 403 |
| BstMBI | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 80, 163 |
| BstNSI | RCATGY | 1 cut(s) | 360 |
| BstV1I | GCAGC | 1 cut(s) | 331 |
| BstX2I | RGATCY | 1 cut(s) | 379 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 435 |
| BstYI | RGATCY | 1 cut(s) | 379 |
| BsuRI | GGCC | 1 cut(s) | 37 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| BveI | ACCTGC | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 2 cut(s) | 35, 349 |
| Csp6I | GTAC | 1 cut(s) | 373 |
| CviAII | CATG | 2 cut(s) | 251, 357 |
| CviJI | RGCY | 5 cut(s) | 33, 37, 83, 129, 227 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 37, 83, 129, 227 |
| CviQI | GTAC | 1 cut(s) | 373 |
| DpnI | GATC | 5 cut(s) | 9, 138, 242, 381, 402 |
| DpnII | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| Eco130I | CCWWGG | 1 cut(s) | 434 |
| EcoT14I | CCWWGG | 1 cut(s) | 434 |
| ErhI | CCWWGG | 1 cut(s) | 434 |
| FaeI | CATG | 2 cut(s) | 254, 360 |
| FaiI | YATR | 9 cut(s) | 148, 150, 159, 161, 170, 252, 330, 342, 358 |
| FatI | CATG | 2 cut(s) | 250, 356 |
| Fnu4HI | GCNGC | 1 cut(s) | 345 |
| FokI | GGATG | 1 cut(s) | 293 |
| Fsp4HI | GCNGC | 1 cut(s) | 345 |
| FspBI | CTAG | 1 cut(s) | 30 |
| GluI | GCNGC | 1 cut(s) | 345 |
| HaeIII | GGCC | 1 cut(s) | 37 |
| Hin1II | CATG | 2 cut(s) | 254, 360 |
| HindIII | AAGCTT | 1 cut(s) | 225 |
| HinfI | GANTC | 1 cut(s) | 418 |
| HphI | GGTGA | 2 cut(s) | 32, 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 256 |
| Hpy188I | TCNGA | 2 cut(s) | 50, 417 |
| Hpy188III | TCNNGA | 1 cut(s) | 140 |
| Hpy8I | GTNNAC | 1 cut(s) | 256 |
| HpyAV | CCTTC | 1 cut(s) | 72 |
| HpyCH4III | ACNGT | 1 cut(s) | 17 |
| HpyCH4IV | ACGT | 1 cut(s) | 412 |
| HpyCH4V | TGCA | 4 cut(s) | 21, 94, 157, 297 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 80, 163 |
| HpySE526I | ACGT | 1 cut(s) | 412 |
| Hsp92II | CATG | 2 cut(s) | 254, 360 |
| Kzo9I | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| LpnPI | CCDG | 6 cut(s) | 7, 19, 56, 57, 153, 263 |
| Lsp1109I | GCAGC | 1 cut(s) | 331 |
| LweI | GCATC | 1 cut(s) | 311 |
| MaeI | CTAG | 1 cut(s) | 30 |
| MaeII | ACGT | 1 cut(s) | 412 |
| MaeIII | GTNAC | 2 cut(s) | 109, 208 |
| MalI | GATC | 5 cut(s) | 9, 138, 242, 381, 402 |
| MboI | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| MboII | GAAGA | 1 cut(s) | 131 |
| MfeI | CAATTG | 1 cut(s) | 396 |
| MflI | RGATCY | 1 cut(s) | 379 |
| MluCI | AATT | 4 cut(s) | 96, 122, 306, 396 |
| MmeI | TCCRAC | 1 cut(s) | 407 |
| MnlI | CCTC | 3 cut(s) | 48, 69, 73 |
| MseI | TTAA | 6 cut(s) | 125, 183, 236, 309, 318, 407 |
| MslI | CAYNNNNRTG | 1 cut(s) | 292 |
| MunI | CAATTG | 1 cut(s) | 396 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 80, 163 |
| NdeII | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| NlaIII | CATG | 2 cut(s) | 254, 360 |
| NlaIV | GGNNCC | 1 cut(s) | 381 |
| NmuCI | GTSAC | 1 cut(s) | 109 |
| NspI | RCATGY | 1 cut(s) | 360 |
| PciI | ACATGT | 1 cut(s) | 356 |
| PfeI | GAWTC | 1 cut(s) | 418 |
| PkrI | GCNGC | 1 cut(s) | 346 |
| PscI | ACATGT | 1 cut(s) | 356 |
| PspN4I | GGNNCC | 1 cut(s) | 381 |
| PsuI | RGATCY | 1 cut(s) | 379 |
| RsaI | GTAC | 1 cut(s) | 374 |
| RsaNI | GTAC | 1 cut(s) | 373 |
| RseI | CAYNNNNRTG | 1 cut(s) | 292 |
| SaqAI | TTAA | 6 cut(s) | 125, 183, 236, 309, 318, 407 |
| SatI | GCNGC | 1 cut(s) | 345 |
| Sau3AI | GATC | 5 cut(s) | 7, 136, 240, 379, 400 |
| SetI | ASST | 8 cut(s) | 26, 35, 111, 131, 156, 229, 338, 415 |
| SfaNI | GCATC | 1 cut(s) | 311 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 292 |
| Sse9I | AATT | 4 cut(s) | 96, 122, 306, 396 |
| SspI | AATATT | 1 cut(s) | 271 |
| SspMI | CTAG | 1 cut(s) | 30 |
| StyI | CCWWGG | 1 cut(s) | 434 |
| TaaI | ACNGT | 1 cut(s) | 17 |
| TaiI | ACGT | 1 cut(s) | 415 |
| TasI | AATT | 4 cut(s) | 96, 122, 306, 396 |
| TatI | WGTACW | 1 cut(s) | 372 |
| TfiI | GAWTC | 1 cut(s) | 418 |
| Tru1I | TTAA | 6 cut(s) | 125, 183, 236, 309, 318, 407 |
| Tru9I | TTAA | 6 cut(s) | 125, 183, 236, 309, 318, 407 |
| TseFI | GTSAC | 1 cut(s) | 109 |
| TseI | GCWGC | 1 cut(s) | 344 |
| Tsp45I | GTSAC | 1 cut(s) | 109 |
| TspDTI | ATGAA | 1 cut(s) | 345 |
| XceI | RCATGY | 1 cut(s) | 360 |
| XspI | CTAG | 1 cut(s) | 30 |