DNA recombination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF223 | PF02721 | 19 - 117 | 1.2e-10 | Domain of unknown function DUF223 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 406 |
| AccI | GTMKAC | 1 cut(s) | 258 |
| AclWI | GGATC | 1 cut(s) | 140 |
| AcsI | RAATTY | 1 cut(s) | 381 |
| AfaI | GTAC | 1 cut(s) | 282 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 406 |
| AflII | CTTAAG | 1 cut(s) | 550 |
| AgsI | TTSAA | 4 cut(s) | 22, 244, 321, 337 |
| AluBI | AGCT | 3 cut(s) | 329, 372, 421 |
| AluI | AGCT | 3 cut(s) | 329, 372, 421 |
| AlwI | GGATC | 1 cut(s) | 140 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 233 |
| AoxI | GGCC | 1 cut(s) | 154 |
| ApeKI | GCWGC | 1 cut(s) | 67 |
| ApoI | RAATTY | 1 cut(s) | 381 |
| AseI | ATTAAT | 1 cut(s) | 435 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 47 |
| AsuHPI | GGTGA | 1 cut(s) | 197 |
| BbsI | GAAGAC | 1 cut(s) | 10 |
| BbvI | GCAGC | 1 cut(s) | 79 |
| BccI | CCATC | 2 cut(s) | 146, 408 |
| BfaI | CTAG | 1 cut(s) | 587 |
| BfmI | CTRYAG | 1 cut(s) | 65 |
| BfrI | CTTAAG | 1 cut(s) | 550 |
| BglII | AGATCT | 1 cut(s) | 457 |
| BisI | GCNGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 1 cut(s) | 69 |
| BmsI | GCATC | 1 cut(s) | 530 |
| BpiI | GAAGAC | 1 cut(s) | 10 |
| BsaAI | YACGTR | 1 cut(s) | 59 |
| BsaBI | GATNNNNATC | 1 cut(s) | 520 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 406 |
| Bse8I | GATNNNNATC | 1 cut(s) | 520 |
| BseGI | GGATG | 1 cut(s) | 301 |
| BseJI | GATNNNNATC | 1 cut(s) | 520 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 406 |
| BseMII | CTCAG | 1 cut(s) | 240 |
| BseXI | GCAGC | 1 cut(s) | 79 |
| BshFI | GGCC | 1 cut(s) | 156 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 406 |
| BsnI | GGCC | 1 cut(s) | 156 |
| Bsp143I | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| BspANI | GGCC | 1 cut(s) | 156 |
| BspCNI | CTCAG | 1 cut(s) | 239 |
| BspMAI | CTGCAG | 1 cut(s) | 69 |
| BspPI | GGATC | 1 cut(s) | 140 |
| BspTI | CTTAAG | 1 cut(s) | 550 |
| BssMI | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| BssNAI | GTATAC | 1 cut(s) | 259 |
| Bst1107I | GTATAC | 1 cut(s) | 259 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 117, 416 |
| Bst6I | CTCTTC | 1 cut(s) | 550 |
| BstAFI | CTTAAG | 1 cut(s) | 550 |
| BstBAI | YACGTR | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 1 cut(s) | 327 |
| BstDEI | CTNAG | 1 cut(s) | 226 |
| BstF5I | GGATG | 1 cut(s) | 301 |
| BstKTI | GATC | 6 cut(s) | 135, 145, 267, 448, 460, 537 |
| BstMBI | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| BstSFI | CTRYAG | 1 cut(s) | 65 |
| BstV1I | GCAGC | 1 cut(s) | 79 |
| BstV2I | GAAGAC | 1 cut(s) | 10 |
| BstX2I | RGATCY | 1 cut(s) | 457 |
| BstYI | RGATCY | 1 cut(s) | 457 |
| BstZ17I | GTATAC | 1 cut(s) | 259 |
| BsuRI | GGCC | 1 cut(s) | 156 |
| BtsCI | GGATG | 1 cut(s) | 301 |
| Cac8I | GCNNGC | 1 cut(s) | 327 |
| CaiI | CAGNNNCTG | 1 cut(s) | 233 |
| CseI | GACGC | 1 cut(s) | 197 |
| Csp6I | GTAC | 1 cut(s) | 281 |
| CviAII | CATG | 4 cut(s) | 197, 262, 278, 484 |
| CviJI | RGCY | 7 cut(s) | 29, 70, 156, 215, 329, 372, 421 |
| CviKI_1 | RGCY | 7 cut(s) | 29, 70, 156, 215, 329, 372, 421 |
| CviQI | GTAC | 1 cut(s) | 281 |
| DdeI | CTNAG | 1 cut(s) | 226 |
| DpnI | GATC | 6 cut(s) | 134, 144, 266, 447, 459, 536 |
| DpnII | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| DraI | TTTAAA | 1 cut(s) | 304 |
| Eam1104I | CTCTTC | 1 cut(s) | 550 |
| EarI | CTCTTC | 1 cut(s) | 550 |
| EcoRI | GAATTC | 1 cut(s) | 381 |
| EcoT22I | ATGCAT | 1 cut(s) | 113 |
| FaeI | CATG | 4 cut(s) | 200, 265, 281, 487 |
| FatI | CATG | 4 cut(s) | 196, 261, 277, 483 |
| FblI | GTMKAC | 1 cut(s) | 258 |
| Fnu4HI | GCNGC | 1 cut(s) | 68 |
| FokI | GGATG | 1 cut(s) | 308 |
| Fsp4HI | GCNGC | 1 cut(s) | 68 |
| FspBI | CTAG | 1 cut(s) | 587 |
| GluI | GCNGC | 1 cut(s) | 68 |
| HaeIII | GGCC | 1 cut(s) | 156 |
| HgaI | GACGC | 1 cut(s) | 197 |
| Hin1II | CATG | 4 cut(s) | 200, 265, 281, 487 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HinfI | GANTC | 2 cut(s) | 396, 563 |
| HphI | GGTGA | 1 cut(s) | 197 |
| Hpy166II | GTNNAC | 5 cut(s) | 62, 208, 259, 313, 597 |
| Hpy188III | TCNNGA | 3 cut(s) | 52, 234, 293 |
| Hpy8I | GTNNAC | 5 cut(s) | 62, 208, 259, 313, 597 |
| HpyAV | CCTTC | 1 cut(s) | 506 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 117, 416 |
| HpyCH4IV | ACGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 3 cut(s) | 67, 111, 325 |
| HpyF3I | CTNAG | 1 cut(s) | 226 |
| HpySE526I | ACGT | 1 cut(s) | 58 |
| Hsp92II | CATG | 4 cut(s) | 200, 265, 281, 487 |
| Kzo9I | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| LmnI | GCTCC | 1 cut(s) | 366 |
| LpnPI | CCDG | 5 cut(s) | 153, 155, 219, 278, 407 |
| Lsp1109I | GCAGC | 1 cut(s) | 79 |
| LweI | GCATC | 1 cut(s) | 530 |
| MaeI | CTAG | 1 cut(s) | 587 |
| MaeII | ACGT | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 6 cut(s) | 134, 144, 266, 447, 459, 536 |
| MboI | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| MboII | GAAGA | 5 cut(s) | 10, 95, 249, 440, 567 |
| MfeI | CAATTG | 1 cut(s) | 489 |
| MflI | RGATCY | 1 cut(s) | 457 |
| MluCI | AATT | 5 cut(s) | 192, 217, 316, 381, 489 |
| MnlI | CCTC | 8 cut(s) | 19, 73, 116, 167, 205, 235, 487, 553 |
| Mph1103I | ATGCAT | 1 cut(s) | 113 |
| MroXI | GAANNNNTTC | 1 cut(s) | 47 |
| MseI | TTAA | 4 cut(s) | 303, 435, 501, 551 |
| MslI | CAYNNNNRTG | 2 cut(s) | 336, 526 |
| MspA1I | CMGCKG | 1 cut(s) | 421 |
| MspCI | CTTAAG | 1 cut(s) | 550 |
| MunI | CAATTG | 1 cut(s) | 489 |
| NdeII | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| NlaIII | CATG | 4 cut(s) | 200, 265, 281, 487 |
| NmuCI | GTSAC | 1 cut(s) | 185 |
| NsiI | ATGCAT | 1 cut(s) | 113 |
| PdmI | GAANNNNTTC | 1 cut(s) | 47 |
| PfeI | GAWTC | 2 cut(s) | 396, 563 |
| PflFI | GACNNNGTC | 1 cut(s) | 288 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 406 |
| PkrI | GCNGC | 1 cut(s) | 69 |
| Ppu21I | YACGTR | 1 cut(s) | 59 |
| PshBI | ATTAAT | 1 cut(s) | 435 |
| PstI | CTGCAG | 1 cut(s) | 69 |
| PstNI | CAGNNNCTG | 1 cut(s) | 233 |
| PsuI | RGATCY | 1 cut(s) | 457 |
| PsyI | GACNNNGTC | 1 cut(s) | 288 |
| PvuII | CAGCTG | 1 cut(s) | 421 |
| RsaI | GTAC | 1 cut(s) | 282 |
| RsaNI | GTAC | 1 cut(s) | 281 |
| RseI | CAYNNNNRTG | 2 cut(s) | 336, 526 |
| SaqAI | TTAA | 4 cut(s) | 303, 435, 501, 551 |
| SatI | GCNGC | 1 cut(s) | 68 |
| Sau3AI | GATC | 6 cut(s) | 132, 142, 264, 445, 457, 534 |
| SetI | ASST | 4 cut(s) | 61, 331, 374, 423 |
| SfaNI | GCATC | 1 cut(s) | 530 |
| SfcI | CTRYAG | 1 cut(s) | 65 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 336, 526 |
| SmlI | CTYRAG | 1 cut(s) | 550 |
| SmoI | CTYRAG | 1 cut(s) | 550 |
| Sse9I | AATT | 5 cut(s) | 192, 217, 316, 381, 489 |
| SspMI | CTAG | 1 cut(s) | 587 |
| TaaI | ACNGT | 3 cut(s) | 16, 117, 416 |
| TaiI | ACGT | 1 cut(s) | 61 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TasI | AATT | 5 cut(s) | 192, 217, 316, 381, 489 |
| TfiI | GAWTC | 2 cut(s) | 396, 563 |
| Tru1I | TTAA | 4 cut(s) | 303, 435, 501, 551 |
| Tru9I | TTAA | 4 cut(s) | 303, 435, 501, 551 |
| TseFI | GTSAC | 1 cut(s) | 185 |
| TseI | GCWGC | 1 cut(s) | 67 |
| Tsp45I | GTSAC | 1 cut(s) | 185 |
| TspDTI | ATGAA | 5 cut(s) | 56, 185, 192, 266, 343 |
| Tth111I | GACNNNGTC | 1 cut(s) | 288 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 406 |
| Vha464I | CTTAAG | 1 cut(s) | 550 |
| VspI | ATTAAT | 1 cut(s) | 435 |
| XapI | RAATTY | 1 cut(s) | 381 |
| XmiI | GTMKAC | 1 cut(s) | 258 |
| XmnI | GAANNNNTTC | 1 cut(s) | 47 |
| XspI | CTAG | 1 cut(s) | 587 |
| Zsp2I | ATGCAT | 1 cut(s) | 113 |