Rw7G027610

Belongs to the helicase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
35981347 .. 35983777
2431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027610.1

Sequence Viewer

Length: 1497 bp
ATGGAACAAATGGCAAGACCAACACTGATCCATGAACTAAGACCATTTCAGCTGAATTTCACCATGAGGATTAGAGTTTCAAGGATATGGAGACCACAAAGATTCCAAAGTGAAACATATGATGGTCTTCACTATATCTTAACTGATGAAAGAGGAGATATGGTTCATGCTAAGATTGACGAATCTGATTATCCCCATGTTTTGAATAAGATGGAACAAGGACGAATCTATGACATTTCTCATTTCCACACATCCAAGATTCAAGGGAGATATAAAGTCGTCAATCATGAAGTGCAACTACGTTTCAACGAGTTGACAAAATTTGAACCCGTTGAACATGGGGCTCCCCCAATTCCAGAATATTCCTTCCATCTGCTTGAATTCAATCAGCTGGGCCTAAACCCTAAACCGCAAACACTACTTATAGATGTTTATGGCTGTATCAAATCAGTTATCCCAGTACATCAGGTGCTCATAAAAGACACAAACAAGATGGAACCAAAATGTGAAGTCGTTATGGAGAATTTGAGGAGAGAAGATTTGAGAATCACTCTATGGGGCGATGTCGCACAAAAATTCGACTTAGAAACCATTCGAGCGTCGCCCTCACCAGTTCTTGCTGTAGTGACCAGTCTCAGAATAACACAATTCCTAGAGCAAATTACAACAACAGCTACAAATCACTCCTGTGTTTTCATAAATCCAGAGATTCAACAAGCACAGGAGTACAGAGCTGAGTTCTCTAGGCCAGGTGATAAAGTAAAGATACTTCCTCCTCCATTTAATCGGCAAACACCAGAACAAGTGAAAGAAAAGACAACAATATCAGTGTCTGATCTGCATACACTGGATCCAGATTCATACACAAACCAGAGTGTGTGTTGCATTGCTTCTATCCGAAGGTTTTCATTGCACAGTGGTTGGTGGTACAAAGCTTGCGGGACAGGGACCTGTTATAGGCAACTAACAGAAGATAAAGATACTAATGACCTTAAATGTAGCCACCATGGCATACAAATTCCTGTCCCATGGTATAAAGTTCACATGATAATTTATGATCGCAATAATCAAGCTACAGTACTGATTATGGGAAAGGAGGCAGAACAACTATTTGGCATTAGTTGTGCAGACCTGCTGAAGAAGGAACTGTATGGAACAGAACTAATAGTACTCGAAGAAATGCAAAAAACTGCTGATCAAACTTATCTGTTTGAGCTCAAATTCAATATGAAGAATGAGTTGTTCGTTAGAAACATCTTCCCAACTCACCAAGCCTCTGCATCGATAACACAGCAAGAGCCAACTACCACAACACCAGATCGTTTCCTTTATCAAAAGAAGAGAAACATTGAGGGGAGCAGCCGAACAGTCTCCCTTTCAGAATCTGAAAAAAAGCTGAAGAGTGAAGAGCAGATCAAGCATAGAACCACAGTTCTACCCTCATCAACAATGGTTCTGCGAAGCAAAGAACTGTATGAAAAAAAAAAGGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

498

Amino Acids

57.89

Weight (kDa)

7.64

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF223 PF02721 9 - 108 1.6e-10 Domain of unknown function DUF223
REPA_OB_2 PF16900 138 - 220 9.9e-09 Replication protein A OB domain
Rep_fac-A_C PF08646 307 - 411 1.6e-07 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000050)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_1g07041 FvH4_2g06412 FvH4_2g08146 FvH4_2g10321 FvH4_2g13511 FvH4_2g20780 FvH4_2g20781 FvH4_2g22171 FvH4_2g25221 FvH4_3g03500 FvH4_3g07130 FvH4_3g10140 FvH4_3g10141 FvH4_3g24350 FvH4_4g08242 FvH4_4g13410 FvH4_4g18140 FvH4_4g22470 FvH4_5g19920 FvH4_5g21501 FvH4_5g26612 FvH4_5g29621 FvH4_5g31990 FvH4_6g00280 FvH4_6g00280 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g07190 FvH4_6g08820 FvH4_6g29600 FvH4_6g30401 FvH4_6g33630 FvH4_7g08310 FvH4_7g08311 FvH4_7g10871 FvH4_7g18890 FvH4_7g18891
malus_domestica MD01G1202900.v1.1 MD02G1249900.v1.1 MD03G1022200.v1.1 MD03G1164900.v1.1 MD04G1002000.v1.1 MD05G1167800.v1.1 MD05G1167900.v1.1 MD05G1202200.v1.1 MD05G1215800.v1.1 MD05G1328800.v1.1 MD07G1020000.v1.1 MD07G1020100.v1.1 MD07G1084700.v1.1 MD08G1007900.v1.1 MD08G1229500.v1.1 MD09G1016000.v1.1 MD09G1184200.v1.1 MD10G1198800.v1.1 MD10G1198900.v1.1 MD11G1203900.v1.1 MD12G1081100.v1.1 MD12G1101700.v1.1 MD13G1126700.v1.1 MD13G1158300.v1.1 MD13G1161500.v1.1 MD14G1083800.v1.1 MD14G1125700.v1.1 MD14G1159700.v1.1 MD14G1159800.v1.1 MD17G1252600.v1.1 MD17G1261900.v1.1 MD17G1262000.v1.1
pyrus_communis pycom01g12270 pycom02g14690 pycom02g17560 pycom02g26880 pycom02g26890 pycom03g13090 pycom03g19990 pycom03g20000 pycom04g00130 pycom04g05050 pycom04g10460 pycom05g27190 pycom07g05970 pycom08g02820 pycom08g11570 pycom09g07420 pycom09g07430 pycom09g08580 pycom10g06760 pycom10g11210 pycom10g11220 pycom11g14380 pycom11g21990 pycom12419g00230 pycom12494g00020 pycom14g06150 pycom15g09750 pycom15g20130 pycom15g27020 pycom15g27230 pycom16g17550 pycom16g18200 pycom5153684g00260 pycom520g00040
rosa_chinensis RchiOBHm_Chr1g0320331 RchiOBHm_Chr1g0329871 RchiOBHm_Chr1g0339991 RchiOBHm_Chr1g0371171 RchiOBHm_Chr1g0378741 RchiOBHm_Chr1g0378751 RchiOBHm_Chr1g0379271 RchiOBHm_Chr2g0122381 RchiOBHm_Chr2g0133251 RchiOBHm_Chr2g0133271 RchiOBHm_Chr2g0133331 RchiOBHm_Chr2g0135141 RchiOBHm_Chr2g0141711 RchiOBHm_Chr2g0145531 RchiOBHm_Chr2g0149141 RchiOBHm_Chr2g0149151 RchiOBHm_Chr2g0150581 RchiOBHm_Chr2g0159361 RchiOBHm_Chr2g0162161 RchiOBHm_Chr2g0174211 RchiOBHm_Chr3g0484061 RchiOBHm_Chr3g0491361 RchiOBHm_Chr4g0413141 RchiOBHm_Chr4g0444601 RchiOBHm_Chr5g0004901 RchiOBHm_Chr5g0004911 RchiOBHm_Chr5g0010461 RchiOBHm_Chr5g0027941 RchiOBHm_Chr5g0028311 RchiOBHm_Chr5g0030141 RchiOBHm_Chr5g0035621 RchiOBHm_Chr5g0050871 RchiOBHm_Chr5g0053321 RchiOBHm_Chr5g0060091 RchiOBHm_Chr5g0063301 RchiOBHm_Chr5g0066571 RchiOBHm_Chr5g0067561 RchiOBHm_Chr6g0262741 RchiOBHm_Chr7g0184001 RchiOBHm_Chr7g0206181 RchiOBHm_Chr7g0212031 RchiOBHm_Chr7g0214521 RchiOBHm_Chr7g0230521 RchiOBHm_Chr7g0230621
rosa_laevigata RLG00000014424 RLG00000022069 RLG00000036206
rosa_multiflora Rmu_sc0000121.1_g000006 Rmu_sc0000271.1_g000001 Rmu_sc0000293.1_g000010 Rmu_sc0000309.1_g000052 Rmu_sc0000556.1_g000045 Rmu_sc0000837.1_g000079 Rmu_sc0001069.1_g000026 Rmu_sc0001198.1_g000001 Rmu_sc0001353.1_g000031 Rmu_sc0001461.1_g000107 Rmu_sc0002011.1_g000038 Rmu_sc0003270.1_g000034 Rmu_sc0003874.1_g000017 Rmu_sc0004729.1_g000006 Rmu_sc0007116.1_g000001 Rmu_sc0009087.1_g000019 Rmu_sc0009877.1_g000004 Rmu_sc0015060.1_g000008 Rmu_sc0016097.1_g000001
rosa_roxburghii Rroxscaffold_1G00024140 Rroxscaffold_1G00027240 Rroxscaffold_1G00030710 Rroxscaffold_1G00035010 Rroxscaffold_1G00050490 Rroxscaffold_1G00069340 Rroxscaffold_1G00072870 Rroxscaffold_2G00078360 Rroxscaffold_2G00098490 Rroxscaffold_2G00106110 Rroxscaffold_2G00109450 Rroxscaffold_2G00125260 Rroxscaffold_2G00154260 Rroxscaffold_3G00221290 Rroxscaffold_3G00221300 Rroxscaffold_3G00232770 Rroxscaffold_3G00249670 Rroxscaffold_3G00255640 Rroxscaffold_3G00255820 Rroxscaffold_3G00255870 Rroxscaffold_3G00258160 Rroxscaffold_3G00258170 Rroxscaffold_3G00265290 Rroxscaffold_4G00320550 Rroxscaffold_4G00322930 Rroxscaffold_4G00331930 Rroxscaffold_4G00332460 Rroxscaffold_5G00337730 Rroxscaffold_5G00364590 Rroxscaffold_5G00365660 Rroxscaffold_5G00373900 Rroxscaffold_6G00395750 Rroxscaffold_6G00397090 Rroxscaffold_6G00407660 Rroxscaffold_6G00421590 Rroxscaffold_7G00156820 Rroxscaffold_7G00174040 Rroxscaffold_7G00175610 Rroxscaffold_7G00182780 Rroxscaffold_7G00210390 Rroxscaffold_7G00210490 Rroxscaffold_7G00214770 Rroxscaffold_7G00215580 Rroxscaffold_7G00215690
rosa_rugosa Rorug01G0099600 Rorug01G0127300 Rorug02G0145300 Rorug02G0145400 Rorug02G0145500.1 Rorug02G0145600 Rorug02G0145700 Rorug02G0145700 Rorug02G0278400 Rorug02G0444700 Rorug02G0542800 Rorug02G0547200 Rorug04G0015900 Rorug04G0082400 Rorug04G0297900 Rorug05G0078200 Rorug05G0207900 Rorug05G0277000 Rorug05G0528600 Rorug05G0528700 Rorug05G0528800 Rorug06G0001000 Rorug06G0246500 Rorug06G0246600 Rorug06G0246700 Rorug07G0189200 Rorug07G0189300 Rorug07G0189400 Rorug07G0189500 Rorug07G0212200 Rorug07G0212200 Rorug07G0221500 Rorug07G0248800
rosa_samantha Rh1AG011600 Rh1AG052100 Rh1AG163900 Rh1BG006600 Rh1BG025100 Rh1BG025200 Rh1BG032500 Rh1BG374400 Rh1BG374500 Rh1CG153000 Rh1DG148800 Rh1DG160400 Rh1DG181900 Rh1DG405100 Rh1DG445600 Rh2AG005600 Rh2AG137100 Rh2AG150500 Rh2AG150600 Rh2AG243200 Rh2AG264300 Rh2AG349900 Rh2AG387700 Rh2AG485100 Rh2CG115600 Rh2CG269600 Rh2CG294000 Rh2CG294100 Rh2CG317700 Rh2CG375000 Rh2CG471200 Rh2CG611400 Rh2DG070000 Rh2DG073900 Rh2DG234600 Rh3AG258200 Rh3CG251500 Rh3CG283900 Rh3CG331200 Rh3CG371500 Rh3DG077300 Rh3DG185900 Rh3DG332700 Rh3DG360400 Rh4AG105100 Rh4BG191100 Rh4DG139800 Rh4DG186000 Rh4DG187900 Rh5AG302000 Rh5AG431600 Rh5CG090000 Rh5CG214700 Rh5CG299100 Rh5CG561200 Rh5DG205600 Rh5DG244500 Rh5DG257300 Rh5DG257400 Rh5DG325900 Rh5DG335500 Rh5DG359300 Rh5DG364600 Rh5DG388600 Rh6AG013900 Rh6BG045400 Rh6CG031300 Rh6CG069100 Rh6CG157500 Rh6DG029800 Rh6DG066100 Rh6DG260800 Rh6DG320100 Rh7AG007600 Rh7BG046100 Rh7BG053900 Rh7BG204900 Rh7BG322600 Rh7BG421200 Rh7DG063200 Rh7DG233200 Rh7DG287000 Rh7DG289600 Rh7DG323500 Rh7DG323800 Rh7DG323900
rosa_wichuraiana Rw0G001160 Rw0G003580 Rw0G003590 Rw0G005910 Rw0G006230 Rw0G010240 Rw0G011660 Rw0G015630 Rw0G021440 Rw0G023690 Rw1G000060 Rw1G006170 Rw1G007940 Rw1G008630 Rw1G009460 Rw1G013800 Rw1G015100 Rw1G015710 Rw1G016040 Rw1G024780 Rw2G004590 Rw2G026770 Rw2G030550 Rw2G036430 Rw3G011440 Rw3G020600 Rw3G020710 Rw3G025390 Rw3G026320 Rw4G003380 Rw4G016140 Rw4G018350 Rw4G027460 Rw5G004690 Rw5G011140 Rw5G011820 Rw5G016560 Rw5G023230 Rw5G027290 Rw5G028520 Rw5G040540 Rw5G046050 Rw6G013650 Rw6G018020 Rw6G019800 Rw6G023450 Rw7G027610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1140
AciI CCGC 2 cut(s) 410, 939
AclWI GGATC 3 cut(s) 22, 845, 858
AcsI RAATTY 7 cut(s) 55, 320, 380, 523, 575, 1017, 1220
AcuI CTGAAG 2 cut(s) 1157, 1418
AfaI GTAC 5 cut(s) 462, 728, 929, 1080, 1170
AfiI CCNNNNNNNGG 1 cut(s) 957
AjnI CCWGG 1 cut(s) 748
AjuI GAANNNNNNNTTGG 2 cut(s) 1095, 1127
AleI CACNNNNGTG 1 cut(s) 687
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 8 cut(s) 52, 391, 674, 734, 935, 1073, 1216, 1396
AluI AGCT 8 cut(s) 52, 391, 674, 734, 935, 1073, 1216, 1396
Alw21I GWGCWC 2 cut(s) 474, 1218
Alw26I GTCTC 3 cut(s) 85, 638, 1375
AlwI GGATC 3 cut(s) 22, 845, 858
AlwNI CAGNNNCTG 2 cut(s) 833, 1385
AoxI GGCC 2 cut(s) 394, 746
ApeKI GCWGC 1 cut(s) 1359
ApoI RAATTY 7 cut(s) 55, 320, 380, 523, 575, 1017, 1220
Asp700I GAANNNNTTC 2 cut(s) 591, 904
AspS9I GGNCC 2 cut(s) 394, 948
AsuHPI GGTGA 4 cut(s) 52, 600, 764, 1259
AvaII GGWCC 1 cut(s) 948
BamHI GGATCC 1 cut(s) 850
BanII GRGCYC 2 cut(s) 346, 1218
BarI GAAGNNNNNNTAC 4 cut(s) 282, 314, 753, 785
BbsI GAAGAC 1 cut(s) 119
Bbv12I GWGCWC 2 cut(s) 474, 1218
BbvI GCAGC 1 cut(s) 1371
BccI CCATC 4 cut(s) 116, 205, 378, 487
BciT130I CCWGG 1 cut(s) 750
BclI TGATCA 1 cut(s) 1195
BcoDI GTCTC 3 cut(s) 85, 638, 1375
BfaI CTAG 2 cut(s) 653, 744
BfmI CTRYAG 2 cut(s) 621, 1074
BfuAI ACCTGC 1 cut(s) 1140
BglI GCCNNNNNGGC 1 cut(s) 1008
BisI GCNGC 1 cut(s) 1360
BlsI GCNGC 1 cut(s) 1361
BmcAI AGTACT 2 cut(s) 1080, 1170
Bme1390I CCNGG 1 cut(s) 750
Bme18I GGWCC 1 cut(s) 948
BmgT120I GGNCC 2 cut(s) 394, 948
BmiI GGNNCC 4 cut(s) 345, 498, 852, 949
BmrFI CCNGG 1 cut(s) 750
BmrI ACTGGG 1 cut(s) 452
BmsI GCATC 1 cut(s) 1289
BmuI ACTGGG 1 cut(s) 452
BpiI GAAGAC 1 cut(s) 119
BplI GAGNNNNNCTC 2 cut(s) 535, 567
Bsa29I ATCGAT 1 cut(s) 1283
BsaI GGTCTC 1 cut(s) 85
BsaJI CCNNGG 2 cut(s) 1006, 1028
BsaXI ACNNNNNCTCC 2 cut(s) 147, 177
Bsc4I CCNNNNNNNGG 1 cut(s) 957
Bse1I ACTGG 4 cut(s) 458, 611, 630, 852
Bse3DI GCAATG 2 cut(s) 885, 908
BseBI CCWGG 1 cut(s) 750
BseCI ATCGAT 1 cut(s) 1283
BseDI CCNNGG 2 cut(s) 1006, 1028
BseGI GGATG 1 cut(s) 251
BseLI CCNNNNNNNGG 1 cut(s) 957
BseMI GCAATG 2 cut(s) 885, 908
BseMII CTCAG 3 cut(s) 649, 726, 1482
BseNI ACTGG 4 cut(s) 458, 611, 630, 852
BseRI GAGGAG 3 cut(s) 168, 544, 765
BseXI GCAGC 1 cut(s) 1371
BseYI CCCAGC 1 cut(s) 391
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 2 cut(s) 396, 748
BshVI ATCGAT 1 cut(s) 1283
BsiHKAI GWGCWC 2 cut(s) 474, 1218
BslFI GGGAC 3 cut(s) 955, 961, 1010
BslI CCNNNNNNNGG 1 cut(s) 957
BsmAI GTCTC 3 cut(s) 85, 638, 1375
BsmFI GGGAC 3 cut(s) 955, 961, 1010
BsnI GGCC 2 cut(s) 396, 748
Bso31I GGTCTC 1 cut(s) 85
Bsp1286I GDGCHC 3 cut(s) 346, 474, 1218
Bsp143I GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
Bsp19I CCATGG 2 cut(s) 1006, 1028
BspACI CCGC 2 cut(s) 410, 939
BspANI GGCC 2 cut(s) 396, 748
BspCNI CTCAG 3 cut(s) 648, 727, 1483
BspDI ATCGAT 1 cut(s) 1283
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 4 cut(s) 345, 498, 852, 949
BspMI ACCTGC 1 cut(s) 1140
BspPI GGATC 3 cut(s) 22, 845, 858
BspQI GCTCTTC 1 cut(s) 1401
BspTNI GGTCTC 1 cut(s) 85
BsrDI GCAATG 2 cut(s) 885, 908
BsrI ACTGG 4 cut(s) 458, 611, 630, 852
BssECI CCNNGG 2 cut(s) 1006, 1028
BssMI GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
BssT1I CCWWGG 2 cut(s) 1006, 1028
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 6 cut(s) 917, 1078, 1149, 1369, 1432, 1473
Bst6I CTCTTC 3 cut(s) 1334, 1394, 1401
BstC8I GCNNGC 1 cut(s) 937
BstDEI CTNAG 6 cut(s) 38, 171, 583, 635, 735, 1491
BstDSI CCRYGG 2 cut(s) 1006, 1028
BstENI CCTNNNNNAGG 1 cut(s) 955
BstF5I GGATG 1 cut(s) 251
BstKTI GATC 7 cut(s) 30, 838, 853, 1060, 1198, 1321, 1416
BstMAI GTCTC 3 cut(s) 85, 638, 1375
BstMBI GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
BstMWI GCNNNNNNNGC 2 cut(s) 1008, 1417
BstNI CCWGG 1 cut(s) 750
BstSCI CCNGG 1 cut(s) 748
BstSFI CTRYAG 2 cut(s) 621, 1074
BstV1I GCAGC 1 cut(s) 1371
BstV2I GAAGAC 1 cut(s) 119
BstX2I RGATCY 1 cut(s) 850
BstYI RGATCY 1 cut(s) 850
Bsu15I ATCGAT 1 cut(s) 1283
BsuRI GGCC 2 cut(s) 396, 748
BsuTUI ATCGAT 1 cut(s) 1283
BtgI CCRYGG 2 cut(s) 1006, 1028
BtgZI GCGATG 1 cut(s) 576
BtsCI GGATG 1 cut(s) 251
BtsIMutI CAGTG 4 cut(s) 23, 834, 845, 922
BveI ACCTGC 1 cut(s) 1140
Cac8I GCNNGC 1 cut(s) 937
CaiI CAGNNNCTG 2 cut(s) 833, 1385
CciI TCATGA 1 cut(s) 286
Cfr13I GGNCC 2 cut(s) 394, 948
ClaI ATCGAT 1 cut(s) 1283
CseI GACGC 1 cut(s) 588
Csp6I GTAC 5 cut(s) 461, 727, 928, 1079, 1169
CviAII CATG 9 cut(s) 32, 64, 167, 197, 287, 338, 1007, 1029, 1045
CviQI GTAC 5 cut(s) 461, 727, 928, 1079, 1169
DdeI CTNAG 6 cut(s) 38, 171, 583, 635, 735, 1491
DpnI GATC 7 cut(s) 29, 837, 852, 1059, 1197, 1320, 1415
DpnII GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
Eam1104I CTCTTC 3 cut(s) 1334, 1394, 1401
EarI CTCTTC 3 cut(s) 1334, 1394, 1401
Ecl136II GAGCTC 1 cut(s) 1216
Eco130I CCWWGG 2 cut(s) 1006, 1028
Eco24I GRGCYC 2 cut(s) 346, 1218
Eco31I GGTCTC 1 cut(s) 85
Eco47I GGWCC 1 cut(s) 948
Eco53kI GAGCTC 1 cut(s) 1216
Eco57I CTGAAG 2 cut(s) 1157, 1418
EcoICRI GAGCTC 1 cut(s) 1216
EcoNI CCTNNNNNAGG 1 cut(s) 955
EcoO109I RGGNCCY 1 cut(s) 948
EcoRI GAATTC 1 cut(s) 380
EcoRII CCWGG 1 cut(s) 748
EcoT14I CCWWGG 2 cut(s) 1006, 1028
EcoT38I GRGCYC 2 cut(s) 346, 1218
ErhI CCWWGG 2 cut(s) 1006, 1028
FaeI CATG 9 cut(s) 35, 67, 170, 200, 290, 341, 1010, 1032, 1048
FaqI GGGAC 3 cut(s) 955, 961, 1010
FatI CATG 9 cut(s) 31, 63, 166, 196, 286, 337, 1006, 1028, 1044
FauI CCCGC 1 cut(s) 932
FauNDI CATATG 1 cut(s) 118
FbaI TGATCA 1 cut(s) 1195
Fnu4HI GCNGC 1 cut(s) 1360
FokI GGATG 1 cut(s) 238
FriOI GRGCYC 2 cut(s) 346, 1218
Fsp4HI GCNGC 1 cut(s) 1360
FspBI CTAG 2 cut(s) 653, 744
GluI GCNGC 1 cut(s) 1360
GsaI CCCAGC 1 cut(s) 395
HaeIII GGCC 2 cut(s) 396, 748
HgaI GACGC 1 cut(s) 588
Hin1II CATG 9 cut(s) 35, 67, 170, 200, 290, 341, 1010, 1032, 1048
HincII GTYRAC 1 cut(s) 315
HindII GTYRAC 1 cut(s) 315
HindIII AAGCTT 1 cut(s) 933
HinfI GANTC 8 cut(s) 102, 182, 225, 259, 546, 709, 857, 1382
HphI GGTGA 4 cut(s) 52, 600, 764, 1259
Hpy166II GTNNAC 2 cut(s) 315, 1042
Hpy188I TCNGA 6 cut(s) 187, 638, 835, 899, 1381, 1387
Hpy188III TCNNGA 4 cut(s) 287, 356, 704, 854
Hpy8I GTNNAC 2 cut(s) 315, 1042
Hpy99I CGWCG 1 cut(s) 604
HpyAV CCTTC 3 cut(s) 376, 894, 1135
HpyCH4III ACNGT 6 cut(s) 917, 1078, 1149, 1369, 1432, 1473
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 7 cut(s) 295, 841, 885, 913, 1127, 1183, 1280
HpyF10VI GCNNNNNNNGC 2 cut(s) 1008, 1417
HpyF3I CTNAG 6 cut(s) 38, 171, 583, 635, 735, 1491
HpySE526I ACGT 1 cut(s) 301
Hsp92II CATG 9 cut(s) 35, 67, 170, 200, 290, 341, 1010, 1032, 1048
Ksp22I TGATCA 1 cut(s) 1195
Kzo9I GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
LguI GCTCTTC 1 cut(s) 1401
LmnI GCTCC 2 cut(s) 349, 1356
Lsp1109I GCAGC 1 cut(s) 1371
LweI GCATC 1 cut(s) 1289
MaeI CTAG 2 cut(s) 653, 744
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 1 cut(s) 625
MalI GATC 7 cut(s) 29, 837, 852, 1059, 1197, 1320, 1415
MboI GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
MflI RGATCY 1 cut(s) 850
MhlI GDGCHC 3 cut(s) 346, 474, 1218
MroXI GAANNNNTTC 2 cut(s) 591, 904
MseI TTAA 3 cut(s) 140, 783, 993
MslI CAYNNNNRTG 1 cut(s) 687
MspA1I CMGCKG 2 cut(s) 52, 391
MspR9I CCNGG 1 cut(s) 750
MvaI CCWGG 1 cut(s) 750
MwoI GCNNNNNNNGC 2 cut(s) 1008, 1417
NcoI CCATGG 2 cut(s) 1006, 1028
NdeI CATATG 1 cut(s) 118
NdeII GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
NlaIII CATG 9 cut(s) 35, 67, 170, 200, 290, 341, 1010, 1032, 1048
NlaIV GGNNCC 4 cut(s) 345, 498, 852, 949
NmuCI GTSAC 1 cut(s) 625
OliI CACNNNNGTG 1 cut(s) 687
PagI TCATGA 1 cut(s) 286
PciSI GCTCTTC 1 cut(s) 1401
PdmI GAANNNNTTC 2 cut(s) 591, 904
PfeI GAWTC 8 cut(s) 102, 182, 225, 259, 546, 709, 857, 1382
PkrI GCNGC 1 cut(s) 1361
PpuMI RGGWCCY 1 cut(s) 948
Psp124BI GAGCTC 1 cut(s) 1218
Psp5II RGGWCCY 1 cut(s) 948
Psp6I CCWGG 1 cut(s) 748
PspFI CCCAGC 1 cut(s) 391
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 4 cut(s) 345, 498, 852, 949
PspPI GGNCC 2 cut(s) 394, 948
PspPPI RGGWCCY 1 cut(s) 948
PsrI GAACNNNNNNTAC 2 cut(s) 1152, 1184
PstNI CAGNNNCTG 2 cut(s) 833, 1385
PsuI RGATCY 1 cut(s) 850
PvuII CAGCTG 2 cut(s) 52, 391
RsaI GTAC 5 cut(s) 462, 728, 929, 1080, 1170
RsaNI GTAC 5 cut(s) 461, 727, 928, 1079, 1169
RseI CAYNNNNRTG 1 cut(s) 687
SacI GAGCTC 1 cut(s) 1218
SapI GCTCTTC 1 cut(s) 1401
SaqAI TTAA 3 cut(s) 140, 783, 993
SatI GCNGC 1 cut(s) 1360
Sau3AI GATC 7 cut(s) 27, 835, 850, 1057, 1195, 1318, 1413
Sau96I GGNCC 2 cut(s) 394, 948
ScaI AGTACT 2 cut(s) 1080, 1170
ScrFI CCNGG 1 cut(s) 750
SduI GDGCHC 3 cut(s) 346, 474, 1218
SfaNI GCATC 1 cut(s) 1289
SfcI CTRYAG 2 cut(s) 621, 1074
SinI GGWCC 1 cut(s) 948
SmiMI CAYNNNNRTG 1 cut(s) 687
SsiI CCGC 2 cut(s) 410, 939
SspI AATATT 1 cut(s) 362
SspMI CTAG 2 cut(s) 653, 744
SstI GAGCTC 1 cut(s) 1218
StyD4I CCNGG 1 cut(s) 748
StyI CCWWGG 2 cut(s) 1006, 1028
TaaI ACNGT 6 cut(s) 917, 1078, 1149, 1369, 1432, 1473
TaiI ACGT 1 cut(s) 304
TaqI TCGA 4 cut(s) 579, 595, 1173, 1283
TatI WGTACW 4 cut(s) 460, 726, 1078, 1168
TfiI GAWTC 8 cut(s) 102, 182, 225, 259, 546, 709, 857, 1382
Tru1I TTAA 3 cut(s) 140, 783, 993
Tru9I TTAA 3 cut(s) 140, 783, 993
TscAI CASTG 4 cut(s) 30, 834, 852, 922
TseFI GTSAC 1 cut(s) 625
TseI GCWGC 1 cut(s) 1359
Tsp45I GTSAC 1 cut(s) 625
TspDTI ATGAA 9 cut(s) 48, 155, 162, 303, 685, 849, 897, 1244, 1491
TspRI CASTG 4 cut(s) 30, 834, 852, 922
VpaK11BI GGWCC 1 cut(s) 948
XagI CCTNNNNNAGG 1 cut(s) 955
XapI RAATTY 7 cut(s) 55, 320, 380, 523, 575, 1017, 1220
XmnI GAANNNNTTC 2 cut(s) 591, 904
XspI CTAG 2 cut(s) 653, 744
ZrmI AGTACT 2 cut(s) 1080, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.