FvH4_3g36310

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
31126244 .. 31133690
7447 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36310.t1

Sequence Viewer

Length: 1323 bp
ATGAGGGAGCTTTGGAAAGAGAGGGGTGTGTCTGGCTTGTCCGGCGGCGCCACAGCATCGGCGTGGGCTTTTCGCCTCGTCGGTGTAGGGGGGCAGGGCCTTCCGGCCAGTTTTGTGCTGGAGGATACGAACTATGGCTTCACTCAGCGTGAAGGGGTTGTTGCATCTCAGGGAAGACGGCGGCCAGGATCTGGCTGCGGCGTGGCGTGGGGTCCCCGGAGTCTTGAACTGGTGTCTTGTTGCGAGGTTATGGGTGGCGGCATCTTCATGACTCGGTGGTGGTCAGAATGCATACAGGGGCTCCGACGACGACGACGGCTCAGATCTTGCGGCGGTGCTGGGGGTGAAACGGAGGCGATGATACGGCTGCTGCTTTGGGCCGGGTGGAGTACGTTTGGGCTTCCAATGGAACTGGTTCGGTGGGCCTGGGCCAGTGGTGTAGTTTTGGGCCAGGTTTGTGTGCTACTTCGGTGGCGTTATTCTTGGGGACTATCGGCTTTAATATCGGTGCGGTCTGGGTGGCAACATGAGGGTGGATTACCTTTGCACGTGGTCTGGTGGTATTTGGACACGGTGTGGAAGAAGGGGAATTGGCTCGTTTTAGTGTTGGCAGCAAAATTGTATCGTTACTTTCAAGACTATGTAGCTCTTTTTGAGCGTGAAATTAGGTTAGGGGTTGGGCCCACTTGGCTCATGGATGTTGTTGTTGGCGACGAACCCGTAACTACAGATCTTTTTGGGAATGTGTGTCGTGGTGTAGGTACCACAACCGGTCATTCTATTATGCTTGAGACTCCGGCGTCTCCGGTGATTTTCCGATCACCATCAATTTTCCGGCGACCGGTGACCGGAATCCGGCAACCGGTGTTCGGCGACGGGAATCCGGGGGTTGGACGTGTTGATCCCTACTCACGTGAGAACAATGCACCACGTGGAAAGGGACATAATGGTCGTGGAAAGGGCTGTGGAGGCCCTCCACATGTATGGCGTAGAGATGGTGGTGCTGGCCCAAGTGGTCATGGTGGTACTGGTCCCAGTGGTCATGGCTCCAAGGTGCAGAAAGCTCCTAGGGATCCTCAAATCCAAAAGGAAAGAGTTGGCACAGAACCTTGCTATAGGTGTGGCACTACTGGACATTGGTACAAGAACTGCCAAGCAAGCAACTTAGTAGCAACCAACTACAGGAGGTATAGAAAGTCTATGGAGCAAGAGGCTCAGTATATGGACGAAGGAGGCCCTGACCCAGATGTCAACCTCACAATTGCAGACTTTCCTGGCAACAAGGACCTTGCTCAGTCAAAGGACGTTCCAGACTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

441

Amino Acids

48.33

Weight (kDa)

9.4

Isoelectric Point (pI)

41.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 799, 948, 1247
Acc65I GGTACC 1 cut(s) 761
AccB1I GGYRCC 2 cut(s) 47, 761
AccB7I CCANNNNNTGG 1 cut(s) 191
AciI CCGC 7 cut(s) 45, 181, 198, 258, 330, 333, 511
AclWI GGATC 4 cut(s) 196, 896, 1067, 1080
AcoI YGGCCR 2 cut(s) 105, 182
AcvI CACGTG 3 cut(s) 550, 914, 932
AcyI GRCGYC 2 cut(s) 48, 800
AdeI CACNNNGTG 2 cut(s) 576, 932
AfaI GTAC 4 cut(s) 391, 763, 1027, 1142
AfiI CCNNNNNNNGG 8 cut(s) 191, 841, 848, 855, 862, 869, 890, 1182
AflIII ACRYGT 2 cut(s) 895, 979
AgeI ACCGGT 3 cut(s) 770, 841, 862
AgsI TTSAA 2 cut(s) 227, 635
AjiI CACGTC 1 cut(s) 896
AjnI CCWGG 4 cut(s) 184, 425, 450, 1273
AluBI AGCT 3 cut(s) 10, 647, 1064
AluI AGCT 3 cut(s) 10, 647, 1064
Alw26I GTCTC 2 cut(s) 785, 807
AlwI GGATC 4 cut(s) 196, 896, 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 191
ApaI GGGCCC 1 cut(s) 684
ApeKI GCWGC 4 cut(s) 195, 367, 370, 611
AsiGI ACCGGT 3 cut(s) 770, 841, 862
Asp700I GAANNNNTTC 1 cut(s) 414
Asp718I GGTACC 1 cut(s) 761
AspA2I CCTAGG 1 cut(s) 1067
AspLEI GCGC 1 cut(s) 50
AsuC2I CCSGG 3 cut(s) 217, 382, 885
AsuHPI GGTGA 4 cut(s) 356, 813, 820, 856
AvaII GGWCC 3 cut(s) 212, 1031, 1285
AvrII CCTAGG 1 cut(s) 1067
BaeGI GKGCMC 1 cut(s) 684
BamHI GGATCC 1 cut(s) 1072
BanI GGYRCC 2 cut(s) 47, 761
BanII GRGCYC 2 cut(s) 303, 684
BbrPI CACGTG 3 cut(s) 550, 914, 932
BbsI GAAGAC 1 cut(s) 181
BbvI GCAGC 4 cut(s) 182, 354, 357, 623
BccI CCATC 2 cut(s) 832, 989
BceAI ACGGC 3 cut(s) 194, 332, 380
BciT130I CCWGG 4 cut(s) 186, 427, 452, 1275
BciVI GTATCC 1 cut(s) 118
BcnI CCSGG 3 cut(s) 217, 382, 885
BcoDI GTCTC 2 cut(s) 785, 807
BfaI CTAG 1 cut(s) 1068
BfmI CTRYAG 3 cut(s) 726, 1114, 1180
BfoI RGCGCY 1 cut(s) 51
BfuI GTATCC 1 cut(s) 118
BglI GCCNNNNNGGC 1 cut(s) 688
BglII AGATCT 2 cut(s) 323, 730
BisI GCNGC 9 cut(s) 46, 182, 196, 199, 259, 331, 368, 371, 612
BlnI CCTAGG 1 cut(s) 1067
BlsI GCNGC 9 cut(s) 47, 183, 197, 200, 260, 332, 369, 372, 613
Bme1390I CCNGG 7 cut(s) 186, 217, 382, 427, 452, 885, 1275
Bme18I GGWCC 3 cut(s) 212, 1031, 1285
BmgBI CACGTC 1 cut(s) 896
BmiI GGNNCC 9 cut(s) 49, 213, 214, 302, 682, 763, 1033, 1048, 1074
BmrFI CCNGG 7 cut(s) 186, 217, 382, 427, 452, 885, 1275
BmrI ACTGGG 1 cut(s) 1029
BmsI GCATC 3 cut(s) 65, 173, 270
BmuI ACTGGG 1 cut(s) 1029
BpiI GAAGAC 1 cut(s) 181
BpmI CTGGAG 1 cut(s) 140
BpuEI CTTGAG 1 cut(s) 809
BpuMI CCSGG 3 cut(s) 217, 382, 885
BsaAI YACGTR 3 cut(s) 550, 914, 932
BsaBI GATNNNNATC 1 cut(s) 823
BsaHI GRCGYC 2 cut(s) 48, 800
BsaJI CCNNGG 5 cut(s) 215, 426, 884, 1050, 1067
BsaWI WCCGGW 5 cut(s) 770, 805, 841, 848, 862
BsaXI ACNNNNNCTCC 2 cut(s) 285, 315
Bsc4I CCNNNNNNNGG 8 cut(s) 191, 841, 848, 855, 862, 869, 890, 1182
Bse118I RCCGGY 3 cut(s) 770, 841, 862
Bse1I ACTGG 7 cut(s) 108, 234, 417, 432, 1033, 1035, 1135
Bse8I GATNNNNATC 1 cut(s) 823
BseBI CCWGG 4 cut(s) 186, 427, 452, 1275
BseDI CCNNGG 5 cut(s) 215, 426, 884, 1050, 1067
BseGI GGATG 1 cut(s) 703
BseJI GATNNNNATC 1 cut(s) 823
BseLI CCNNNNNNNGG 8 cut(s) 191, 841, 848, 855, 862, 869, 890, 1182
BseMII CTCAG 5 cut(s) 158, 182, 334, 1229, 1307
BseNI ACTGG 7 cut(s) 108, 234, 417, 432, 1033, 1035, 1135
BseSI GKGCMC 1 cut(s) 684
BseXI GCAGC 4 cut(s) 182, 354, 357, 623
BseYI CCCAGC 1 cut(s) 338
BsgI GTGCAG 1 cut(s) 1076
Bsh1285I CGRYCG 1 cut(s) 842
BshNI GGYRCC 2 cut(s) 47, 761
BshTI ACCGGT 3 cut(s) 770, 841, 862
BsiEI CGRYCG 1 cut(s) 842
BslFI GGGAC 4 cut(s) 198, 501, 954, 1017
BslI CCNNNNNNNGG 8 cut(s) 191, 841, 848, 855, 862, 869, 890, 1182
BsmAI GTCTC 2 cut(s) 785, 807
BsmBI CGTCTC 1 cut(s) 807
BsmFI GGGAC 4 cut(s) 198, 501, 954, 1017
BsmI GAATGC 1 cut(s) 293
Bsp120I GGGCCC 1 cut(s) 680
Bsp1286I GDGCHC 2 cut(s) 303, 684
Bsp143I GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
BspACI CCGC 7 cut(s) 45, 181, 198, 258, 330, 333, 511
BspCNI CTCAG 5 cut(s) 157, 181, 333, 1228, 1306
BspHI TCATGA 1 cut(s) 267
BspLI GGNNCC 9 cut(s) 49, 213, 214, 302, 682, 763, 1033, 1048, 1074
BspPI GGATC 4 cut(s) 196, 896, 1067, 1080
BspT107I GGYRCC 2 cut(s) 47, 761
BsrFI RCCGGY 3 cut(s) 770, 841, 862
BsrI ACTGG 7 cut(s) 108, 234, 417, 432, 1033, 1035, 1135
BssAI RCCGGY 3 cut(s) 770, 841, 862
BssECI CCNNGG 5 cut(s) 215, 426, 884, 1050, 1067
BssMI GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
BssNI GRCGYC 2 cut(s) 48, 800
BssT1I CCWWGG 2 cut(s) 1050, 1067
Bst2UI CCWGG 4 cut(s) 186, 427, 452, 1275
Bst4CI ACNGT 1 cut(s) 574
BstACI GRCGYC 2 cut(s) 48, 800
BstBAI YACGTR 3 cut(s) 550, 914, 932
BstC8I GCNNGC 2 cut(s) 1006, 1159
BstDEI CTNAG 6 cut(s) 144, 168, 320, 1165, 1215, 1293
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 1 cut(s) 703
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 6 cut(s) 191, 326, 733, 821, 904, 1075
BstMAI GTCTC 2 cut(s) 785, 807
BstMBI GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
BstMCI CGRYCG 1 cut(s) 842
BstMWI GCNNNNNNNGC 4 cut(s) 42, 688, 969, 1158
BstNI CCWGG 4 cut(s) 186, 427, 452, 1275
BstNSI RCATGY 1 cut(s) 983
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 7 cut(s) 184, 215, 380, 425, 450, 883, 1273
BstSFI CTRYAG 3 cut(s) 726, 1114, 1180
BstSLI GKGCMC 1 cut(s) 684
BstV1I GCAGC 4 cut(s) 182, 354, 357, 623
BstV2I GAAGAC 1 cut(s) 181
BstX2I RGATCY 4 cut(s) 188, 323, 730, 1072
BstXI CCANNNNNNTGG 1 cut(s) 984
BstYI RGATCY 4 cut(s) 188, 323, 730, 1072
BsuI GTATCC 1 cut(s) 118
BtgZI GCGATG 1 cut(s) 371
BtrI CACGTC 1 cut(s) 896
BtsCI GGATG 1 cut(s) 703
BtsIMutI CAGTG 2 cut(s) 439, 1042
Cac8I GCNNGC 2 cut(s) 1006, 1159
CaiI CAGNNNCTG 1 cut(s) 191
CciI TCATGA 1 cut(s) 267
CfoI GCGC 1 cut(s) 50
Cfr10I RCCGGY 3 cut(s) 770, 841, 862
CseI GACGC 1 cut(s) 789
Csp6I GTAC 4 cut(s) 390, 762, 1026, 1141
CspAI ACCGGT 3 cut(s) 770, 841, 862
CviAII CATG 6 cut(s) 268, 527, 694, 980, 1019, 1043
CviQI GTAC 4 cut(s) 390, 762, 1026, 1141
DdeI CTNAG 6 cut(s) 144, 168, 320, 1165, 1215, 1293
DinI GGCGCC 1 cut(s) 49
DpnI GATC 6 cut(s) 190, 325, 732, 820, 903, 1074
DpnII GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
DraIII CACNNNGTG 2 cut(s) 576, 932
DrdI GACNNNNNNGTC 3 cut(s) 799, 948, 1247
DseDI GACNNNNNNGTC 3 cut(s) 799, 948, 1247
EaeI YGGCCR 2 cut(s) 105, 182
Eco130I CCWWGG 2 cut(s) 1050, 1067
Eco24I GRGCYC 2 cut(s) 303, 684
Eco47I GGWCC 3 cut(s) 212, 1031, 1285
Eco72I CACGTG 3 cut(s) 550, 914, 932
Eco91I GGTNACC 1 cut(s) 844
EcoO109I RGGNCCY 5 cut(s) 97, 212, 971, 1235, 1285
EcoO65I GGTNACC 1 cut(s) 844
EcoRII CCWGG 4 cut(s) 184, 425, 450, 1273
EcoT14I CCWWGG 2 cut(s) 1050, 1067
EcoT22I ATGCAT 1 cut(s) 293
EcoT38I GRGCYC 2 cut(s) 303, 684
EgeI GGCGCC 1 cut(s) 49
EheI GGCGCC 1 cut(s) 49
ErhI CCWWGG 2 cut(s) 1050, 1067
Esp3I CGTCTC 1 cut(s) 807
FaeI CATG 6 cut(s) 271, 530, 697, 983, 1022, 1046
FaqI GGGAC 4 cut(s) 198, 501, 954, 1017
FatI CATG 6 cut(s) 267, 526, 693, 979, 1018, 1042
Fnu4HI GCNGC 9 cut(s) 46, 182, 196, 199, 259, 331, 368, 371, 612
FokI GGATG 1 cut(s) 710
FriOI GRGCYC 2 cut(s) 303, 684
Fsp4HI GCNGC 9 cut(s) 46, 182, 196, 199, 259, 331, 368, 371, 612
FspBI CTAG 1 cut(s) 1068
GlaI GCGC 1 cut(s) 49
GluI GCNGC 9 cut(s) 46, 182, 196, 199, 259, 331, 368, 371, 612
GsaI CCCAGC 1 cut(s) 342
GsuI CTGGAG 1 cut(s) 140
HaeII RGCGCY 1 cut(s) 51
HgaI GACGC 1 cut(s) 789
HhaI GCGC 1 cut(s) 50
Hin1I GRCGYC 2 cut(s) 48, 800
Hin1II CATG 6 cut(s) 271, 530, 697, 983, 1022, 1046
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HinfI GANTC 5 cut(s) 220, 271, 793, 852, 880
HphI GGTGA 4 cut(s) 356, 813, 820, 856
Hpy166II GTNNAC 1 cut(s) 1252
Hpy188I TCNGA 4 cut(s) 286, 305, 323, 818
Hpy188III TCNNGA 4 cut(s) 224, 268, 635, 1310
Hpy8I GTNNAC 1 cut(s) 1252
Hpy99I CGWCG 7 cut(s) 83, 309, 312, 315, 318, 716, 878
HpyAV CCTTC 4 cut(s) 110, 146, 577, 1223
HpyCH4III ACNGT 1 cut(s) 574
HpyCH4IV ACGT 6 cut(s) 392, 549, 895, 913, 931, 1305
HpyCH4V TGCA 6 cut(s) 164, 291, 547, 926, 1057, 1265
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 688, 969, 1158
HpyF3I CTNAG 6 cut(s) 144, 168, 320, 1165, 1215, 1293
HpySE526I ACGT 6 cut(s) 392, 549, 895, 913, 931, 1305
Hsp92I GRCGYC 2 cut(s) 48, 800
Hsp92II CATG 6 cut(s) 271, 530, 697, 983, 1022, 1046
HspAI GCGC 1 cut(s) 48
KasI GGCGCC 1 cut(s) 47
KflI GGGWCCC 1 cut(s) 212
KpnI GGTACC 1 cut(s) 765
Kzo9I GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
LmnI GCTCC 5 cut(s) 7, 306, 1052, 1069, 1204
Lsp1109I GCAGC 4 cut(s) 182, 354, 357, 623
LweI GCATC 3 cut(s) 65, 173, 270
MaeI CTAG 1 cut(s) 1068
MaeII ACGT 6 cut(s) 392, 549, 895, 913, 931, 1305
MaeIII GTNAC 3 cut(s) 626, 721, 844
MalI GATC 6 cut(s) 190, 325, 732, 820, 903, 1074
MboI GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
MboII GAAGA 3 cut(s) 186, 256, 592
MfeI CAATTG 1 cut(s) 1260
MflI RGATCY 4 cut(s) 188, 323, 730, 1072
MhlI GDGCHC 2 cut(s) 303, 684
MluCI AATT 5 cut(s) 589, 617, 663, 828, 1260
Mly113I GGCGCC 1 cut(s) 48
MlyI GAGTC 3 cut(s) 229, 265, 787
MmeI TCCRAC 2 cut(s) 328, 871
Mph1103I ATGCAT 1 cut(s) 293
MroXI GAANNNNTTC 1 cut(s) 414
MseI TTAA 1 cut(s) 500
MslI CAYNNNNRTG 4 cut(s) 61, 266, 531, 982
MspR9I CCNGG 7 cut(s) 186, 217, 382, 427, 452, 885, 1275
MunI CAATTG 1 cut(s) 1260
Mva1269I GAATGC 1 cut(s) 293
MvaI CCWGG 4 cut(s) 186, 427, 452, 1275
MwoI GCNNNNNNNGC 4 cut(s) 42, 688, 969, 1158
NarI GGCGCC 1 cut(s) 48
NciI CCSGG 3 cut(s) 217, 382, 885
NdeII GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
NlaIII CATG 6 cut(s) 271, 530, 697, 983, 1022, 1046
NlaIV GGNNCC 9 cut(s) 49, 213, 214, 302, 682, 763, 1033, 1048, 1074
NmuCI GTSAC 1 cut(s) 844
NsiI ATGCAT 1 cut(s) 293
NspI RCATGY 1 cut(s) 983
PagI TCATGA 1 cut(s) 267
PciI ACATGT 1 cut(s) 979
PctI GAATGC 1 cut(s) 293
PdmI GAANNNNTTC 1 cut(s) 414
PfeI GAWTC 2 cut(s) 852, 880
PflMI CCANNNNNTGG 1 cut(s) 191
PinAI ACCGGT 3 cut(s) 770, 841, 862
PkrI GCNGC 9 cut(s) 47, 183, 197, 200, 260, 332, 369, 372, 613
PleI GAGTC 3 cut(s) 228, 265, 787
PluTI GGCGCC 1 cut(s) 51
PmaCI CACGTG 3 cut(s) 550, 914, 932
PmlI CACGTG 3 cut(s) 550, 914, 932
PpsI GAGTC 3 cut(s) 228, 265, 787
Ppu21I YACGTR 3 cut(s) 550, 914, 932
PpuMI RGGWCCY 2 cut(s) 212, 1285
PscI ACATGT 1 cut(s) 979
Psp5II RGGWCCY 2 cut(s) 212, 1285
Psp6I CCWGG 4 cut(s) 184, 425, 450, 1273
PspCI CACGTG 3 cut(s) 550, 914, 932
PspEI GGTNACC 1 cut(s) 844
PspFI CCCAGC 1 cut(s) 338
PspGI CCWGG 4 cut(s) 184, 425, 450, 1273
PspN4I GGNNCC 9 cut(s) 49, 213, 214, 302, 682, 763, 1033, 1048, 1074
PspOMI GGGCCC 1 cut(s) 680
PspPPI RGGWCCY 2 cut(s) 212, 1285
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 4 cut(s) 188, 323, 730, 1072
RsaI GTAC 4 cut(s) 391, 763, 1027, 1142
RsaNI GTAC 4 cut(s) 390, 762, 1026, 1141
RseI CAYNNNNRTG 4 cut(s) 61, 266, 531, 982
SaqAI TTAA 1 cut(s) 500
SatI GCNGC 9 cut(s) 46, 182, 196, 199, 259, 331, 368, 371, 612
Sau3AI GATC 6 cut(s) 188, 323, 730, 818, 901, 1072
SchI GAGTC 3 cut(s) 229, 265, 787
ScrFI CCNGG 7 cut(s) 186, 217, 382, 427, 452, 885, 1275
SduI GDGCHC 2 cut(s) 303, 684
SfaNI GCATC 3 cut(s) 65, 173, 270
SfcI CTRYAG 3 cut(s) 726, 1114, 1180
SfoI GGCGCC 1 cut(s) 49
SinI GGWCC 3 cut(s) 212, 1031, 1285
SmiMI CAYNNNNRTG 4 cut(s) 61, 266, 531, 982
SmlI CTYRAG 1 cut(s) 788
SmoI CTYRAG 1 cut(s) 788
Sse9I AATT 5 cut(s) 589, 617, 663, 828, 1260
SsiI CCGC 7 cut(s) 45, 181, 198, 258, 330, 333, 511
SspDI GGCGCC 1 cut(s) 47
SspMI CTAG 1 cut(s) 1068
StyD4I CCNGG 7 cut(s) 184, 215, 380, 425, 450, 883, 1273
StyI CCWWGG 2 cut(s) 1050, 1067
TaaI ACNGT 1 cut(s) 574
TaiI ACGT 6 cut(s) 395, 552, 898, 916, 934, 1308
TasI AATT 5 cut(s) 589, 617, 663, 828, 1260
TauI GCSGC 5 cut(s) 48, 184, 201, 261, 333
TfiI GAWTC 2 cut(s) 852, 880
Tru1I TTAA 1 cut(s) 500
Tru9I TTAA 1 cut(s) 500
TscAI CASTG 2 cut(s) 439, 1042
TseFI GTSAC 1 cut(s) 844
TseI GCWGC 4 cut(s) 195, 367, 370, 611
Tsp45I GTSAC 1 cut(s) 844
TspDTI ATGAA 1 cut(s) 256
TspGWI ACGGA 1 cut(s) 365
TspRI CASTG 2 cut(s) 439, 1042
Van91I CCANNNNNTGG 1 cut(s) 191
VpaK11BI GGWCC 3 cut(s) 212, 1031, 1285
XceI RCATGY 1 cut(s) 983
XcmI CCANNNNNNNNNTGG 2 cut(s) 115, 691
XmaJI CCTAGG 1 cut(s) 1067
XmnI GAANNNNTTC 1 cut(s) 414
XspI CTAG 1 cut(s) 1068
Zsp2I ATGCAT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.