Rmu_ssc0000134.1_g000026

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000134.1
Physical Location & Seq
Forward (+)
88088 .. 88818
731 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000134.1_g000026.1.cds

Sequence Viewer

Length: 654 bp
atgggtaatctaactcaacctgaatttgacattttggactcagaaagacatgagtactatagttgggtttctgatgtggaaactgcctttgtggcaaaaaattacactgccaccatcgaaactctcaccgaaagacaatggaccttgaagacacccaaagaattgtgggatgcccttaagagacgttttgagaacattcatgacactttgctcctagaactaatcgttcagtggaataaaatctgcttgcttgactacaaaagggtcaatgacttcaacaaggcacgtctcaatttctgtggaaaggaactcatagaagatgatatgatccagaagactctttcaacttttcttacttcagcacttatactagtgaaccagtataggcaggagtatgacaataaaagaatcacaatctccaataagctgatcaacctactgcaagtggctgagaggcataatgaggttcttctgcacaacaatatcaggcacattgagacaaagaaaattcgcgaggttaattatggcaaggtgaaaggtggaaagaaccccaatgcaaaaggggtcggacgtgctgatccctacccatgtggaaacaatgcatcacgtggaaagggacatgcaggtcattgtcacggcccgaatcttgaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

217

Amino Acids

25.17

Weight (kDa)

8.58

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 624
Acc36I ACCTGC 1 cut(s) 614
AccII CGCG 1 cut(s) 513
AclWI GGATC 2 cut(s) 322, 572
AcsI RAATTY 2 cut(s) 23, 507
AcuI CTGAAG 1 cut(s) 342
AcvI CACGTG 1 cut(s) 608
AfaI GTAC 1 cut(s) 56
AflII CTTAAG 1 cut(s) 176
AgsI TTSAA 4 cut(s) 148, 277, 345, 650
AhlI ACTAGT 1 cut(s) 370
AjiI CACGTC 2 cut(s) 287, 572
AluBI AGCT 1 cut(s) 427
AluI AGCT 1 cut(s) 427
Alw26I GTCTC 3 cut(s) 175, 293, 491
AlwI GGATC 2 cut(s) 322, 572
AoxI GGCC 1 cut(s) 637
ApoI RAATTY 2 cut(s) 23, 507
AspS9I GGNCC 2 cut(s) 141, 638
AsuHPI GGTGA 2 cut(s) 118, 544
AvaII GGWCC 1 cut(s) 141
BbrPI CACGTG 1 cut(s) 608
BbsI GAAGAC 2 cut(s) 155, 341
BccI CCATC 1 cut(s) 122
BceAI ACGGC 1 cut(s) 652
BclI TGATCA 1 cut(s) 429
BcoDI GTCTC 3 cut(s) 175, 293, 491
BcuI ACTAGT 1 cut(s) 370
BfaI CTAG 2 cut(s) 215, 371
BfmI CTRYAG 1 cut(s) 58
BfrI CTTAAG 1 cut(s) 176
BfuAI ACCTGC 1 cut(s) 614
BglI GCCNNNNNGGC 1 cut(s) 92
BmcAI AGTACT 1 cut(s) 56
Bme18I GGWCC 1 cut(s) 141
BmgBI CACGTC 2 cut(s) 287, 572
BmgT120I GGNCC 2 cut(s) 141, 638
BmsI GCATC 2 cut(s) 160, 611
BpiI GAAGAC 2 cut(s) 155, 341
BsaAI YACGTR 1 cut(s) 608
Bse1I ACTGG 1 cut(s) 379
BseGI GGATG 1 cut(s) 175
BseMII CTCAG 2 cut(s) 54, 441
BseNI ACTGG 1 cut(s) 379
BsgI GTGCAG 1 cut(s) 458
Bsh1236I CGCG 1 cut(s) 513
BshFI GGCC 1 cut(s) 639
BslFI GGGAC 1 cut(s) 630
BsmAI GTCTC 3 cut(s) 175, 293, 491
BsmBI CGTCTC 2 cut(s) 175, 293
BsmFI GGGAC 1 cut(s) 630
BsnI GGCC 1 cut(s) 639
Bsp143I GATC 3 cut(s) 327, 429, 577
Bsp68I TCGCGA 1 cut(s) 513
BspANI GGCC 1 cut(s) 639
BspCNI CTCAG 2 cut(s) 53, 442
BspFNI CGCG 1 cut(s) 513
BspHI TCATGA 1 cut(s) 199
BspMI ACCTGC 1 cut(s) 614
BspPI GGATC 2 cut(s) 322, 572
BspTI CTTAAG 1 cut(s) 176
BsrI ACTGG 1 cut(s) 379
BssMI GATC 3 cut(s) 327, 429, 577
BstAFI CTTAAG 1 cut(s) 176
BstBAI YACGTR 1 cut(s) 608
BstC8I GCNNGC 1 cut(s) 248
BstDEI CTNAG 2 cut(s) 40, 450
BstF5I GGATG 1 cut(s) 175
BstFNI CGCG 1 cut(s) 513
BstKTI GATC 3 cut(s) 330, 432, 580
BstMAI GTCTC 3 cut(s) 175, 293, 491
BstMBI GATC 3 cut(s) 327, 429, 577
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstNSI RCATGY 1 cut(s) 623
BstSFI CTRYAG 1 cut(s) 58
BstUI CGCG 1 cut(s) 513
BstV2I GAAGAC 2 cut(s) 155, 341
BsuRI GGCC 1 cut(s) 639
BtrI CACGTC 2 cut(s) 287, 572
BtsCI GGATG 1 cut(s) 175
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 2 cut(s) 105, 236
BtuMI TCGCGA 1 cut(s) 513
BveI ACCTGC 1 cut(s) 614
Cac8I GCNNGC 1 cut(s) 248
CciI TCATGA 1 cut(s) 199
Cfr13I GGNCC 2 cut(s) 141, 638
Csp6I GTAC 1 cut(s) 55
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviAII CATG 4 cut(s) 50, 200, 588, 620
CviJI RGCY 3 cut(s) 427, 449, 639
CviKI_1 RGCY 3 cut(s) 427, 449, 639
CviQI GTAC 1 cut(s) 55
DdeI CTNAG 2 cut(s) 40, 450
DpnI GATC 3 cut(s) 329, 431, 579
DpnII GATC 3 cut(s) 327, 429, 577
DrdI GACNNNNNNGTC 1 cut(s) 624
DseDI GACNNNNNNGTC 1 cut(s) 624
Eco47I GGWCC 1 cut(s) 141
Eco57I CTGAAG 1 cut(s) 342
Eco72I CACGTG 1 cut(s) 608
EcoT22I ATGCAT 1 cut(s) 604
Esp3I CGTCTC 2 cut(s) 175, 293
FaeI CATG 4 cut(s) 53, 203, 591, 623
FaqI GGGAC 1 cut(s) 630
FatI CATG 4 cut(s) 49, 199, 587, 619
FbaI TGATCA 1 cut(s) 429
FokI GGATG 1 cut(s) 182
FspBI CTAG 2 cut(s) 215, 371
HaeIII GGCC 1 cut(s) 639
Hin1II CATG 4 cut(s) 53, 203, 591, 623
HinfI GANTC 4 cut(s) 38, 337, 408, 643
HphI GGTGA 2 cut(s) 118, 544
Hpy166II GTNNAC 1 cut(s) 376
Hpy188I TCNGA 3 cut(s) 43, 73, 569
Hpy188III TCNNGA 4 cut(s) 200, 331, 512, 647
Hpy8I GTNNAC 1 cut(s) 376
HpyCH4IV ACGT 4 cut(s) 184, 286, 571, 607
HpyCH4V TGCA 5 cut(s) 442, 475, 557, 602, 623
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
HpyF3I CTNAG 2 cut(s) 40, 450
HpySE526I ACGT 4 cut(s) 184, 286, 571, 607
Hsp92II CATG 4 cut(s) 53, 203, 591, 623
Ksp22I TGATCA 1 cut(s) 429
Kzo9I GATC 3 cut(s) 327, 429, 577
LmnI GCTCC 1 cut(s) 216
LpnPI CCDG 6 cut(s) 33, 344, 374, 392, 472, 609
LweI GCATC 2 cut(s) 160, 611
MaeI CTAG 2 cut(s) 215, 371
MaeII ACGT 4 cut(s) 184, 286, 571, 607
MaeIII GTNAC 1 cut(s) 632
MalI GATC 3 cut(s) 329, 431, 579
MboI GATC 3 cut(s) 327, 429, 577
MboII GAAGA 4 cut(s) 160, 329, 346, 461
MluCI AATT 6 cut(s) 23, 100, 161, 292, 507, 520
MlyI GAGTC 2 cut(s) 32, 331
MmeI TCCRAC 1 cut(s) 547
MnlI CCTC 3 cut(s) 447, 457, 508
Mph1103I ATGCAT 1 cut(s) 604
MseI TTAA 2 cut(s) 177, 519
MspCI CTTAAG 1 cut(s) 176
MvnI CGCG 1 cut(s) 513
MwoI GCNNNNNNNGC 1 cut(s) 92
NdeII GATC 3 cut(s) 327, 429, 577
NlaIII CATG 4 cut(s) 53, 203, 591, 623
NmuCI GTSAC 1 cut(s) 632
NruI TCGCGA 1 cut(s) 513
NsiI ATGCAT 1 cut(s) 604
NspI RCATGY 1 cut(s) 623
PagI TCATGA 1 cut(s) 199
PfeI GAWTC 2 cut(s) 408, 643
PleI GAGTC 2 cut(s) 32, 331
PmaCI CACGTG 1 cut(s) 608
PmlI CACGTG 1 cut(s) 608
PpsI GAGTC 2 cut(s) 32, 331
Ppu21I YACGTR 1 cut(s) 608
PspCI CACGTG 1 cut(s) 608
PspPI GGNCC 2 cut(s) 141, 638
RruI TCGCGA 1 cut(s) 513
RsaI GTAC 1 cut(s) 56
RsaNI GTAC 1 cut(s) 55
SaqAI TTAA 2 cut(s) 177, 519
Sau3AI GATC 3 cut(s) 327, 429, 577
Sau96I GGNCC 2 cut(s) 141, 638
ScaI AGTACT 1 cut(s) 56
SchI GAGTC 2 cut(s) 32, 331
SfaNI GCATC 2 cut(s) 160, 611
SfcI CTRYAG 1 cut(s) 58
SinI GGWCC 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
SpeI ACTAGT 1 cut(s) 370
Sse9I AATT 6 cut(s) 23, 100, 161, 292, 507, 520
SspMI CTAG 2 cut(s) 215, 371
TaiI ACGT 4 cut(s) 187, 289, 574, 610
TaqI TCGA 1 cut(s) 117
TasI AATT 6 cut(s) 23, 100, 161, 292, 507, 520
TatI WGTACW 1 cut(s) 54
TfiI GAWTC 2 cut(s) 408, 643
Tru1I TTAA 2 cut(s) 177, 519
Tru9I TTAA 2 cut(s) 177, 519
TscAI CASTG 2 cut(s) 112, 236
TseFI GTSAC 1 cut(s) 632
Tsp45I GTSAC 1 cut(s) 632
TspDTI ATGAA 1 cut(s) 188
TspRI CASTG 2 cut(s) 112, 236
Vha464I CTTAAG 1 cut(s) 176
VpaK11BI GGWCC 1 cut(s) 141
XapI RAATTY 2 cut(s) 23, 507
XceI RCATGY 1 cut(s) 623
XspI CTAG 2 cut(s) 215, 371
ZrmI AGTACT 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.