Rroxscaffold_7G00195370

Protein ASPARTIC PROTEASE IN GUARD CELL

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
37643101 .. 37652284
9184 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00195370.1

Sequence Viewer

Length: 804 bp
ATGCACCACGTGGCAAGGGGCGTGGGGGTCGTGGTATGGGCTGTGGAGGCCCTCCCAATGTATGGCGCGAGAGATGGTGGTGCTGGCCCTAGTGGTCATGGAAACAAGGCGCAAAGGGCACCTAAGAACCCTTCGGTCAAACGGGGTAGAGTTGGCAATGAACCATGCTATAGGTGTAGAGTCATGGGGCATTGGTACAAGAACTGTCAAGCAAGCAACAGAATAGCAGCCAATTATAAGAGGTATAAGGAGTCTAAAGAACAAGAGGCTCACTATATGGAAGAAGGAGGCAATGACCCGGACGTCAACCTCACAATTGCGACTTCAATGGCAACAAGGAACTTGCTCGAGCGAGCATGGGATGCTCCGCAGTATGGGACACTCCGACCCGAGCCCGGGAGGCTCCCTTCTTTCGTATGCTCAATTTTGAAACCGAAGGCTTTGGTTTTGAAGTTGGTAATACTTATAACCGATTCAAAGCGACCGAGTGACAGCCCTAGTTACCAGCAATCCGACCCGGTTTTCAACCCCACCGGATCCTCCACCTTCCGCCCGCTTGACGCGTCGCAATGCTCGGCTCTCCAAGTCTCCGCCTGCCGCAATAACAAGTCCCTCTACCAGGTCTCCTACGACGACGGCTCGTACACCGTTACCGACTACGTGACCAAAACGGTGTCGTTCGAGAACTCCGGTCACGATCAACACTATCGCGTTAGTGAATTGATATCTTCTTTCCTCTACCTTCCTATCTTCTTTCCTCTTCCTTCATCCTCAACAAAAGATGTTAATTGCTCCCATTCATGA

Protein Analysis

267

Amino Acids

29.57

Weight (kDa)

9.0

Isoelectric Point (pI)

48.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 164 - 235 2e-06 Xylanase inhibitor N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 237, 467
AasI GACNNNNNNGTC 1 cut(s) 302
AatII GACGTC 1 cut(s) 306
AccB1I GGYRCC 1 cut(s) 118
AccB7I CCANNNNNTGG 1 cut(s) 62
AccII CGCG 3 cut(s) 68, 563, 711
AciI CCGC 5 cut(s) 368, 550, 554, 591, 598
AclWI GGATC 2 cut(s) 531, 544
AcvI CACGTG 1 cut(s) 10
AcyI GRCGYC 1 cut(s) 303
AdeI CACNNNGTG 1 cut(s) 10
AfaI GTAC 2 cut(s) 197, 644
AfiI CCNNNNNNNGG 5 cut(s) 62, 374, 395, 396, 619
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 5 cut(s) 327, 430, 451, 477, 526
AjnI CCWGG 1 cut(s) 618
Alw26I GTCTC 2 cut(s) 592, 628
AlwI GGATC 2 cut(s) 531, 544
Ama87I CYCGRG 3 cut(s) 347, 389, 395
AoxI GGCC 2 cut(s) 48, 85
ApeKI GCWGC 1 cut(s) 227
AspLEI GCGC 2 cut(s) 68, 112
AspS9I GGNCC 2 cut(s) 49, 86
AsuC2I CCSGG 4 cut(s) 299, 396, 397, 518
AvaI CYCGRG 3 cut(s) 347, 389, 395
BaeGI GKGCMC 1 cut(s) 121
BamHI GGATCC 1 cut(s) 536
BanI GGYRCC 1 cut(s) 118
BanII GRGCYC 1 cut(s) 396
BbrPI CACGTG 1 cut(s) 10
BbvI GCAGC 1 cut(s) 239
BccI CCATC 1 cut(s) 68
BceAI ACGGC 1 cut(s) 652
BciT130I CCWGG 1 cut(s) 620
BcnI CCSGG 4 cut(s) 299, 396, 397, 518
BcoDI GTCTC 2 cut(s) 592, 628
BfaI CTAG 2 cut(s) 90, 498
BfmI CTRYAG 1 cut(s) 169
BglI GCCNNNNNGGC 1 cut(s) 400
BisI GCNGC 2 cut(s) 228, 598
BlsI GCNGC 2 cut(s) 229, 599
Bme1390I CCNGG 5 cut(s) 299, 396, 397, 518, 620
BmeT110I CYCGRG 3 cut(s) 347, 389, 395
BmgT120I GGNCC 2 cut(s) 49, 86
BmiI GGNNCC 3 cut(s) 120, 404, 538
BmrFI CCNGG 5 cut(s) 299, 396, 397, 518, 620
BmsI GCATC 1 cut(s) 352
BpuMI CCSGG 4 cut(s) 299, 396, 397, 518
BsaAI YACGTR 2 cut(s) 10, 661
BsaHI GRCGYC 1 cut(s) 303
BsaI GGTCTC 1 cut(s) 628
BsaJI CCNNGG 1 cut(s) 395
BsaWI WCCGGW 2 cut(s) 533, 689
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 374, 395, 396, 619
Bse3DI GCAATG 3 cut(s) 163, 298, 575
BseBI CCWGG 1 cut(s) 620
BseDI CCNNGG 1 cut(s) 395
BseGI GGATG 2 cut(s) 367, 767
BseLI CCNNNNNNNGG 5 cut(s) 62, 374, 395, 396, 619
BseMI GCAATG 3 cut(s) 163, 298, 575
BseSI GKGCMC 1 cut(s) 121
BseXI GCAGC 1 cut(s) 239
Bsh1236I CGCG 3 cut(s) 68, 563, 711
Bsh1285I CGRYCG 1 cut(s) 485
BshFI GGCC 2 cut(s) 50, 87
BshNI GGYRCC 1 cut(s) 118
BsiEI CGRYCG 1 cut(s) 485
BsiHKCI CYCGRG 3 cut(s) 347, 389, 395
BsiSI CCGG 5 cut(s) 299, 396, 518, 534, 690
BslFI GGGAC 2 cut(s) 391, 595
BslI CCNNNNNNNGG 5 cut(s) 62, 374, 395, 396, 619
BsmAI GTCTC 2 cut(s) 592, 628
BsmFI GGGAC 2 cut(s) 391, 595
BsnI GGCC 2 cut(s) 50, 87
Bso31I GGTCTC 1 cut(s) 628
BsoBI CYCGRG 3 cut(s) 347, 389, 395
Bsp1286I GDGCHC 2 cut(s) 121, 396
Bsp143I GATC 2 cut(s) 536, 697
BspACI CCGC 5 cut(s) 368, 550, 554, 591, 598
BspANI GGCC 2 cut(s) 50, 87
BspFNI CGCG 3 cut(s) 68, 563, 711
BspHI TCATGA 1 cut(s) 800
BspLI GGNNCC 3 cut(s) 120, 404, 538
BspPI GGATC 2 cut(s) 531, 544
BspT107I GGYRCC 1 cut(s) 118
BspTNI GGTCTC 1 cut(s) 628
BsrDI GCAATG 3 cut(s) 163, 298, 575
BssECI CCNNGG 1 cut(s) 395
BssMI GATC 2 cut(s) 536, 697
BssNI GRCGYC 1 cut(s) 303
Bst2UI CCWGG 1 cut(s) 620
Bst4CI ACNGT 3 cut(s) 206, 649, 673
Bst6I CTCTTC 1 cut(s) 765
BstACI GRCGYC 1 cut(s) 303
BstAPI GCANNNNNTGC 1 cut(s) 362
BstBAI YACGTR 2 cut(s) 10, 661
BstC8I GCNNGC 5 cut(s) 85, 214, 354, 554, 595
BstDEI CTNAG 1 cut(s) 123
BstENI CCTNNNNNAGG 1 cut(s) 617
BstF5I GGATG 2 cut(s) 367, 767
BstFNI CGCG 3 cut(s) 68, 563, 711
BstHHI GCGC 2 cut(s) 68, 112
BstKTI GATC 2 cut(s) 539, 700
BstMAI GTCTC 2 cut(s) 592, 628
BstMBI GATC 2 cut(s) 536, 697
BstMCI CGRYCG 1 cut(s) 485
BstMWI GCNNNNNNNGC 4 cut(s) 47, 116, 362, 400
BstNI CCWGG 1 cut(s) 620
BstSCI CCNGG 5 cut(s) 297, 394, 395, 516, 618
BstSFI CTRYAG 1 cut(s) 169
BstSLI GKGCMC 1 cut(s) 121
BstUI CGCG 3 cut(s) 68, 563, 711
BstV1I GCAGC 1 cut(s) 239
BstX2I RGATCY 1 cut(s) 536
BstYI RGATCY 1 cut(s) 536
BsuRI GGCC 2 cut(s) 50, 87
BtsCI GGATG 2 cut(s) 367, 767
Cac8I GCNNGC 5 cut(s) 85, 214, 354, 554, 595
CciI TCATGA 1 cut(s) 800
CfoI GCGC 2 cut(s) 68, 112
Cfr13I GGNCC 2 cut(s) 49, 86
Cfr9I CCCGGG 1 cut(s) 395
CseI GACGC 2 cut(s) 552, 569
CsiI ACCWGGT 1 cut(s) 618
Csp6I GTAC 2 cut(s) 196, 643
CspCI CAANNNNNGTGG 1 cut(s) 38
CviAII CATG 5 cut(s) 98, 165, 184, 357, 801
CviQI GTAC 2 cut(s) 196, 643
DdeI CTNAG 1 cut(s) 123
DpnI GATC 2 cut(s) 538, 699
DpnII GATC 2 cut(s) 536, 697
DraIII CACNNNGTG 1 cut(s) 10
DrdI GACNNNNNNGTC 1 cut(s) 302
DseDI GACNNNNNNGTC 1 cut(s) 302
Eam1104I CTCTTC 1 cut(s) 765
EarI CTCTTC 1 cut(s) 765
EciI GGCGGA 2 cut(s) 539, 580
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 1 cut(s) 628
Eco32I GATATC 1 cut(s) 726
Eco72I CACGTG 1 cut(s) 10
Eco88I CYCGRG 3 cut(s) 347, 389, 395
EcoNI CCTNNNNNAGG 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 618
EcoRV GATATC 1 cut(s) 726
EcoT38I GRGCYC 1 cut(s) 396
FaeI CATG 5 cut(s) 101, 168, 187, 360, 804
FaqI GGGAC 2 cut(s) 391, 595
FatI CATG 5 cut(s) 97, 164, 183, 356, 800
FauI CCCGC 1 cut(s) 561
Fnu4HI GCNGC 2 cut(s) 228, 598
FokI GGATG 2 cut(s) 374, 754
FriOI GRGCYC 1 cut(s) 396
Fsp4HI GCNGC 2 cut(s) 228, 598
FspBI CTAG 2 cut(s) 90, 498
GlaI GCGC 2 cut(s) 67, 111
GluI GCNGC 2 cut(s) 228, 598
HaeIII GGCC 2 cut(s) 50, 87
HapII CCGG 5 cut(s) 299, 396, 518, 534, 690
HgaI GACGC 2 cut(s) 552, 569
HhaI GCGC 2 cut(s) 68, 112
Hin1I GRCGYC 1 cut(s) 303
Hin1II CATG 5 cut(s) 101, 168, 187, 360, 804
Hin6I GCGC 2 cut(s) 66, 110
HinP1I GCGC 2 cut(s) 66, 110
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 3 cut(s) 180, 251, 473
HpaII CCGG 5 cut(s) 299, 396, 518, 534, 690
Hpy166II GTNNAC 2 cut(s) 307, 645
Hpy188I TCNGA 2 cut(s) 386, 514
Hpy188III TCNNGA 3 cut(s) 682, 695, 801
Hpy8I GTNNAC 2 cut(s) 307, 645
Hpy99I CGWCG 3 cut(s) 568, 635, 638
HpyAV CCTTC 7 cut(s) 141, 278, 417, 430, 556, 752, 774
HpyCH4III ACNGT 3 cut(s) 206, 649, 673
HpyCH4IV ACGT 3 cut(s) 9, 303, 660
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 116, 362, 400
HpyF3I CTNAG 1 cut(s) 123
HpySE526I ACGT 3 cut(s) 9, 303, 660
Hsp92I GRCGYC 1 cut(s) 303
Hsp92II CATG 5 cut(s) 101, 168, 187, 360, 804
HspAI GCGC 2 cut(s) 66, 110
Kzo9I GATC 2 cut(s) 536, 697
LmnI GCTCC 3 cut(s) 370, 408, 797
Lsp1109I GCAGC 1 cut(s) 239
LweI GCATC 1 cut(s) 352
MabI ACCWGGT 1 cut(s) 618
MaeI CTAG 2 cut(s) 90, 498
MaeII ACGT 3 cut(s) 9, 303, 660
MaeIII GTNAC 5 cut(s) 488, 500, 649, 661, 692
MalI GATC 2 cut(s) 538, 699
MboI GATC 2 cut(s) 536, 697
MboII GAAGA 4 cut(s) 293, 720, 742, 752
MfeI CAATTG 1 cut(s) 315
MflI RGATCY 1 cut(s) 536
MhlI GDGCHC 2 cut(s) 121, 396
MluCI AATT 5 cut(s) 232, 315, 423, 719, 787
MluI ACGCGT 1 cut(s) 561
MlyI GAGTC 2 cut(s) 189, 260
MmeI TCCRAC 2 cut(s) 409, 537
MseI TTAA 1 cut(s) 786
MspI CCGG 5 cut(s) 299, 396, 518, 534, 690
MspR9I CCNGG 5 cut(s) 299, 396, 397, 518, 620
MunI CAATTG 1 cut(s) 315
MvaI CCWGG 1 cut(s) 620
MvnI CGCG 3 cut(s) 68, 563, 711
MwoI GCNNNNNNNGC 4 cut(s) 47, 116, 362, 400
NciI CCSGG 4 cut(s) 299, 396, 397, 518
NdeII GATC 2 cut(s) 536, 697
NlaIII CATG 5 cut(s) 101, 168, 187, 360, 804
NlaIV GGNNCC 3 cut(s) 120, 404, 538
NmeAIII GCCGAG 1 cut(s) 554
NmuCI GTSAC 3 cut(s) 488, 661, 692
PaeR7I CTCGAG 1 cut(s) 347
PagI TCATGA 1 cut(s) 800
PfeI GAWTC 1 cut(s) 473
PflMI CCANNNNNTGG 1 cut(s) 62
PkrI GCNGC 2 cut(s) 229, 599
PleI GAGTC 2 cut(s) 188, 259
PmaCI CACGTG 1 cut(s) 10
PmlI CACGTG 1 cut(s) 10
PpsI GAGTC 2 cut(s) 188, 259
Ppu21I YACGTR 2 cut(s) 10, 661
PsiI TTATAA 2 cut(s) 237, 467
Psp6I CCWGG 1 cut(s) 618
PspCI CACGTG 1 cut(s) 10
PspGI CCWGG 1 cut(s) 618
PspN4I GGNNCC 3 cut(s) 120, 404, 538
PspPI GGNCC 2 cut(s) 49, 86
PspXI VCTCGAGB 1 cut(s) 347
PsuI RGATCY 1 cut(s) 536
RsaI GTAC 2 cut(s) 197, 644
RsaNI GTAC 2 cut(s) 196, 643
SaqAI TTAA 1 cut(s) 786
SatI GCNGC 2 cut(s) 228, 598
Sau3AI GATC 2 cut(s) 536, 697
Sau96I GGNCC 2 cut(s) 49, 86
SchI GAGTC 2 cut(s) 189, 260
ScrFI CCNGG 5 cut(s) 299, 396, 397, 518, 620
SduI GDGCHC 2 cut(s) 121, 396
SexAI ACCWGGT 1 cut(s) 618
SfaNI GCATC 1 cut(s) 352
SfcI CTRYAG 1 cut(s) 169
Sfr274I CTCGAG 1 cut(s) 347
SlaI CTCGAG 1 cut(s) 347
SmaI CCCGGG 1 cut(s) 397
SmlI CTYRAG 1 cut(s) 347
SmoI CTYRAG 1 cut(s) 347
Sse9I AATT 5 cut(s) 232, 315, 423, 719, 787
SsiI CCGC 5 cut(s) 368, 550, 554, 591, 598
SspMI CTAG 2 cut(s) 90, 498
StyD4I CCNGG 5 cut(s) 297, 394, 395, 516, 618
TaaI ACNGT 3 cut(s) 206, 649, 673
TaiI ACGT 3 cut(s) 12, 306, 663
TaqI TCGA 2 cut(s) 348, 681
TaqII GACCGA 2 cut(s) 124, 499
TasI AATT 5 cut(s) 232, 315, 423, 719, 787
TauI GCSGC 1 cut(s) 600
TfiI GAWTC 1 cut(s) 473
Tru1I TTAA 1 cut(s) 786
Tru9I TTAA 1 cut(s) 786
TseFI GTSAC 3 cut(s) 488, 661, 692
TseI GCWGC 1 cut(s) 227
Tsp45I GTSAC 3 cut(s) 488, 661, 692
TspDTI ATGAA 3 cut(s) 174, 756, 789
TspMI CCCGGG 1 cut(s) 395
Van91I CCANNNNNTGG 1 cut(s) 62
XagI CCTNNNNNAGG 1 cut(s) 617
XhoI CTCGAG 1 cut(s) 347
XmaI CCCGGG 1 cut(s) 395
XspI CTAG 2 cut(s) 90, 498
ZraI GACGTC 1 cut(s) 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.