Rmu_sc0004742.1_g000006

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004742.1
Physical Location & Seq
Reverse (-)
25661 .. 28156
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004742.1_g000006.1.cds

Sequence Viewer

Length: 693 bp
atgaccagaagggacagaaattaccttgaaccagtcgggttggccggagattttccagaaaccggcgagcttgatttcgacgtaaaaacttcaacttcaggcctcgatcccttctggagagttgttaagaacatcaaggcgaactcactggttcaagaatcactcaaaacaaagctctacagctcgagatatcacgatcgaaagtctcggtggcaggaaaaattccagaatcaggcgagcttgagttctgacctaaaaacttcaacaactcgctttgatcccttcatgaaagttgttcagaacttcaatctgagttcaccagctcaagaatcacaggaagaggtggtctgtaactcgagatatcgtgatcgaaaggagaaaaccggcgttgactcaaatcggaacgagcttgccgctgccgctacaggtcgcgccgccgtgcaaggccaccacagacagatggctgatccaactcaacctgaatttgacattttggactcagaaagacttgagtaccaccgttgggtttccaacgtagaaactgcctttgtggcaaaagattacactgctatcattaccaaccccaaagatgatgtaccgtctaataaggtgaaagcaaatgccttaatgtttctgaggcgacatattgatcctagcttacgctgggagtatgttaggtccataattacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

230

Amino Acids

26.54

Weight (kDa)

8.89

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 432
AciI CCGC 3 cut(s) 414, 420, 435
AclWI GGATC 4 cut(s) 101, 272, 461, 644
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 2 cut(s) 221, 482
AcuI CTGAAG 1 cut(s) 81
AfaI GTAC 2 cut(s) 515, 597
AfiI CCNNNNNNNGG 3 cut(s) 62, 232, 523
AgsI TTSAA 5 cut(s) 29, 93, 155, 264, 307
AluBI AGCT 7 cut(s) 70, 175, 183, 240, 323, 409, 657
AluI AGCT 7 cut(s) 70, 175, 183, 240, 323, 409, 657
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 4 cut(s) 101, 272, 461, 644
Ama87I CYCGRG 2 cut(s) 184, 355
AoxI GGCC 3 cut(s) 42, 100, 445
ApeKI GCWGC 1 cut(s) 416
ApoI RAATTY 2 cut(s) 221, 482
AspLEI GCGC 1 cut(s) 434
AspS9I GGNCC 1 cut(s) 678
AsuHPI GGTGA 2 cut(s) 309, 622
AvaI CYCGRG 2 cut(s) 184, 355
AvaII GGWCC 1 cut(s) 678
BaeI ACNNNNGTAYC 2 cut(s) 497, 530
BbvI GCAGC 1 cut(s) 403
BccI CCATC 1 cut(s) 454
BceAI ACGGC 1 cut(s) 422
BcoDI GTCTC 1 cut(s) 210
BfaI CTAG 2 cut(s) 654, 691
BfmI CTRYAG 2 cut(s) 178, 423
BglI GCCNNNNNGGC 1 cut(s) 551
BisI GCNGC 4 cut(s) 414, 417, 420, 435
BlsI GCNGC 4 cut(s) 415, 418, 421, 436
Bme18I GGWCC 1 cut(s) 678
BmeT110I CYCGRG 2 cut(s) 184, 355
BmgT120I GGNCC 1 cut(s) 678
BpmI CTGGAG 1 cut(s) 136
BpuEI CTTGAG 3 cut(s) 262, 309, 530
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 232, 523
Bse118I RCCGGY 2 cut(s) 62, 383
Bse1I ACTGG 2 cut(s) 32, 153
BseLI CCNNNNNNNGG 3 cut(s) 62, 232, 523
BseMII CTCAG 3 cut(s) 302, 513, 626
BseNI ACTGG 2 cut(s) 32, 153
BseXI GCAGC 1 cut(s) 403
BseYI CCCAGC 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 432
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 3 cut(s) 44, 102, 447
BsiEI CGRYCG 1 cut(s) 199
BsiHKCI CYCGRG 2 cut(s) 184, 355
BsiSI CCGG 3 cut(s) 45, 63, 384
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 3 cut(s) 62, 232, 523
BsmAI GTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 26
BsnI GGCC 3 cut(s) 44, 102, 447
BsoBI CYCGRG 2 cut(s) 184, 355
Bsp143I GATC 6 cut(s) 106, 196, 277, 367, 466, 649
BspACI CCGC 3 cut(s) 414, 420, 435
BspANI GGCC 3 cut(s) 44, 102, 447
BspCNI CTCAG 3 cut(s) 303, 512, 627
BspFNI CGCG 1 cut(s) 432
BspHI TCATGA 1 cut(s) 285
BspPI GGATC 4 cut(s) 101, 272, 461, 644
BsrFI RCCGGY 2 cut(s) 62, 383
BsrI ACTGG 2 cut(s) 32, 153
BssAI RCCGGY 2 cut(s) 62, 383
BssMI GATC 6 cut(s) 106, 196, 277, 367, 466, 649
Bst4CI ACNGT 2 cut(s) 521, 600
Bst6I CTCTTC 1 cut(s) 333
BstC8I GCNNGC 3 cut(s) 68, 238, 411
BstDEI CTNAG 3 cut(s) 311, 499, 635
BstFNI CGCG 1 cut(s) 432
BstHHI GCGC 1 cut(s) 434
BstKTI GATC 6 cut(s) 109, 199, 280, 370, 469, 652
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 6 cut(s) 106, 196, 277, 367, 466, 649
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 2 cut(s) 419, 551
BstSFI CTRYAG 2 cut(s) 178, 423
BstUI CGCG 1 cut(s) 432
BstV1I GCAGC 1 cut(s) 403
BsuRI GGCC 3 cut(s) 44, 102, 447
BtsI GCAGTG 1 cut(s) 564
BtsIMutI CAGTG 2 cut(s) 146, 564
Cac8I GCNNGC 3 cut(s) 68, 238, 411
CciI TCATGA 1 cut(s) 285
CfoI GCGC 1 cut(s) 434
Cfr10I RCCGGY 2 cut(s) 62, 383
Cfr13I GGNCC 1 cut(s) 678
Csp6I GTAC 2 cut(s) 514, 596
CviAII CATG 1 cut(s) 286
CviQI GTAC 2 cut(s) 514, 596
DdeI CTNAG 3 cut(s) 311, 499, 635
DpnI GATC 6 cut(s) 108, 198, 279, 369, 468, 651
DpnII GATC 6 cut(s) 106, 196, 277, 367, 466, 649
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 333
EarI CTCTTC 1 cut(s) 333
Eco147I AGGCCT 1 cut(s) 102
Eco32I GATATC 2 cut(s) 191, 362
Eco47I GGWCC 1 cut(s) 678
Eco57I CTGAAG 1 cut(s) 81
Eco88I CYCGRG 2 cut(s) 184, 355
EcoRV GATATC 2 cut(s) 191, 362
FaeI CATG 1 cut(s) 289
FaiI YATR 4 cut(s) 287, 645, 672, 683
FaqI GGGAC 1 cut(s) 26
FatI CATG 1 cut(s) 285
Fnu4HI GCNGC 4 cut(s) 414, 417, 420, 435
Fsp4HI GCNGC 4 cut(s) 414, 417, 420, 435
FspBI CTAG 2 cut(s) 654, 691
GlaI GCGC 1 cut(s) 433
GluI GCNGC 4 cut(s) 414, 417, 420, 435
GsaI CCCAGC 1 cut(s) 667
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 3 cut(s) 44, 102, 447
HapII CCGG 3 cut(s) 45, 63, 384
HhaI GCGC 1 cut(s) 434
Hin1II CATG 1 cut(s) 289
Hin6I GCGC 1 cut(s) 432
HinP1I GCGC 1 cut(s) 432
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HinfI GANTC 5 cut(s) 158, 229, 329, 392, 497
HpaII CCGG 3 cut(s) 45, 63, 384
HphI GGTGA 2 cut(s) 309, 622
Hpy166II GTNNAC 2 cut(s) 317, 391
Hpy188I TCNGA 6 cut(s) 250, 300, 312, 402, 502, 636
Hpy8I GTNNAC 2 cut(s) 317, 391
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 3 cut(s) 3, 121, 292
HpyCH4III ACNGT 2 cut(s) 521, 600
HpyCH4IV ACGT 2 cut(s) 81, 534
HpyCH4V TGCA 1 cut(s) 442
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 551
HpyF3I CTNAG 3 cut(s) 311, 499, 635
HpySE526I ACGT 2 cut(s) 81, 534
Hsp92II CATG 1 cut(s) 289
HspAI GCGC 1 cut(s) 432
Kzo9I GATC 6 cut(s) 106, 196, 277, 367, 466, 649
Lsp1109I GCAGC 1 cut(s) 403
MaeI CTAG 2 cut(s) 654, 691
MaeII ACGT 2 cut(s) 81, 534
MaeIII GTNAC 1 cut(s) 350
MalI GATC 6 cut(s) 108, 198, 279, 369, 468, 651
MboI GATC 6 cut(s) 106, 196, 277, 367, 466, 649
MboII GAAGA 1 cut(s) 350
MluCI AATT 4 cut(s) 19, 221, 482, 684
MlyI GAGTC 2 cut(s) 386, 491
MmeI TCCRAC 2 cut(s) 494, 555
MnlI CCTC 3 cut(s) 113, 334, 630
MseI TTAA 2 cut(s) 126, 626
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 3 cut(s) 45, 63, 384
MvnI CGCG 1 cut(s) 432
MwoI GCNNNNNNNGC 2 cut(s) 419, 551
NdeII GATC 6 cut(s) 106, 196, 277, 367, 466, 649
NlaIII CATG 1 cut(s) 289
PaeR7I CTCGAG 2 cut(s) 184, 355
PagI TCATGA 1 cut(s) 285
PceI AGGCCT 1 cut(s) 102
PfeI GAWTC 3 cut(s) 158, 229, 329
PkrI GCNGC 4 cut(s) 415, 418, 421, 436
Ple19I CGATCG 1 cut(s) 199
PleI GAGTC 2 cut(s) 386, 491
PpsI GAGTC 2 cut(s) 386, 491
PspFI CCCAGC 1 cut(s) 663
PspPI GGNCC 1 cut(s) 678
PvuI CGATCG 1 cut(s) 199
RsaI GTAC 2 cut(s) 515, 597
RsaNI GTAC 2 cut(s) 514, 596
SaqAI TTAA 2 cut(s) 126, 626
SatI GCNGC 4 cut(s) 414, 417, 420, 435
Sau3AI GATC 6 cut(s) 106, 196, 277, 367, 466, 649
Sau96I GGNCC 1 cut(s) 678
SchI GAGTC 2 cut(s) 386, 491
SfcI CTRYAG 2 cut(s) 178, 423
Sfr274I CTCGAG 2 cut(s) 184, 355
SinI GGWCC 1 cut(s) 678
SlaI CTCGAG 2 cut(s) 184, 355
SmlI CTYRAG 5 cut(s) 184, 241, 324, 355, 509
SmoI CTYRAG 5 cut(s) 184, 241, 324, 355, 509
Sse9I AATT 4 cut(s) 19, 221, 482, 684
SseBI AGGCCT 1 cut(s) 102
SsiI CCGC 3 cut(s) 414, 420, 435
SspMI CTAG 2 cut(s) 654, 691
StuI AGGCCT 1 cut(s) 102
TaaI ACNGT 2 cut(s) 521, 600
TaiI ACGT 2 cut(s) 84, 537
TaqI TCGA 6 cut(s) 78, 105, 185, 199, 356, 370
TasI AATT 4 cut(s) 19, 221, 482, 684
TauI GCSGC 3 cut(s) 416, 422, 437
TfiI GAWTC 3 cut(s) 158, 229, 329
Tru1I TTAA 2 cut(s) 126, 626
Tru9I TTAA 2 cut(s) 126, 626
TscAI CASTG 2 cut(s) 153, 571
TseI GCWGC 1 cut(s) 416
TspDTI ATGAA 2 cut(s) 274, 302
TspRI CASTG 2 cut(s) 153, 571
VpaK11BI GGWCC 1 cut(s) 678
XapI RAATTY 2 cut(s) 221, 482
XhoI CTCGAG 2 cut(s) 184, 355
XspI CTAG 2 cut(s) 654, 691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.