No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 33 |
| Acc16I | TGCGCA | 1 cut(s) | 206 |
| AccB1I | GGYRCC | 3 cut(s) | 593, 773, 794 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 756 |
| AccBSI | CCGCTC | 1 cut(s) | 800 |
| AccIII | TCCGGA | 1 cut(s) | 607 |
| AciI | CCGC | 6 cut(s) | 140, 519, 732, 777, 792, 798 |
| AclWI | GGATC | 7 cut(s) | 74, 108, 119, 188, 224, 457, 666 |
| AcoI | YGGCCR | 1 cut(s) | 742 |
| AcsI | RAATTY | 3 cut(s) | 23, 577, 603 |
| AcuI | CTGAAG | 1 cut(s) | 435 |
| AcvI | CACGTG | 1 cut(s) | 686 |
| AcyI | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| AfaI | GTAC | 3 cut(s) | 49, 56, 748 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 756, 791 |
| AgeI | ACCGGT | 1 cut(s) | 770 |
| AgsI | TTSAA | 2 cut(s) | 23, 355 |
| AleI | CACNNNNGTG | 1 cut(s) | 702 |
| AluBI | AGCT | 3 cut(s) | 380, 390, 644 |
| AluI | AGCT | 3 cut(s) | 380, 390, 644 |
| Alw21I | GWGCWC | 1 cut(s) | 392 |
| Alw26I | GTCTC | 2 cut(s) | 104, 759 |
| AlwI | GGATC | 7 cut(s) | 74, 108, 119, 188, 224, 457, 666 |
| Ama87I | CYCGRG | 1 cut(s) | 717 |
| Aor13HI | TCCGGA | 1 cut(s) | 607 |
| AoxI | GGCC | 2 cut(s) | 742, 781 |
| ApeKI | GCWGC | 1 cut(s) | 814 |
| ApoI | RAATTY | 3 cut(s) | 23, 577, 603 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 568, 600 |
| AsiGI | ACCGGT | 1 cut(s) | 770 |
| AspLEI | GCGC | 3 cut(s) | 169, 207, 797 |
| AspS9I | GGNCC | 3 cut(s) | 782, 864, 871 |
| AsuC2I | CCSGG | 1 cut(s) | 598 |
| AsuHPI | GGTGA | 1 cut(s) | 689 |
| AvaI | CYCGRG | 1 cut(s) | 717 |
| AvaII | GGWCC | 2 cut(s) | 864, 871 |
| BanI | GGYRCC | 3 cut(s) | 593, 773, 794 |
| BanII | GRGCYC | 1 cut(s) | 392 |
| BbrPI | CACGTG | 1 cut(s) | 686 |
| Bbv12I | GWGCWC | 1 cut(s) | 392 |
| BbvI | GCAGC | 1 cut(s) | 826 |
| BccI | CCATC | 2 cut(s) | 66, 836 |
| BceAI | ACGGC | 1 cut(s) | 729 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 803, 837 |
| BclI | TGATCA | 2 cut(s) | 561, 568 |
| BcnI | CCSGG | 1 cut(s) | 598 |
| BcoDI | GTCTC | 2 cut(s) | 104, 759 |
| BfaI | CTAG | 3 cut(s) | 144, 711, 877 |
| BfmI | CTRYAG | 1 cut(s) | 588 |
| BfoI | RGCGCY | 2 cut(s) | 170, 798 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 789 |
| BglII | AGATCT | 1 cut(s) | 238 |
| BisI | GCNGC | 5 cut(s) | 733, 777, 793, 798, 815 |
| BlsI | GCNGC | 5 cut(s) | 734, 778, 794, 799, 816 |
| Bme1390I | CCNGG | 1 cut(s) | 598 |
| Bme18I | GGWCC | 2 cut(s) | 864, 871 |
| BmeT110I | CYCGRG | 1 cut(s) | 717 |
| BmgT120I | GGNCC | 3 cut(s) | 782, 864, 871 |
| BmiI | GGNNCC | 6 cut(s) | 138, 595, 775, 784, 796, 865 |
| BmrFI | CCNGG | 1 cut(s) | 598 |
| BmsI | GCATC | 2 cut(s) | 238, 541 |
| Bpu10I | CCTNAGC | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 1 cut(s) | 506 |
| BpuMI | CCSGG | 1 cut(s) | 598 |
| Bsa29I | ATCGAT | 1 cut(s) | 192 |
| BsaAI | YACGTR | 1 cut(s) | 686 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaHI | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| BsaI | GGTCTC | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 4 cut(s) | 43, 786, 806, 867 |
| BsaWI | WCCGGW | 3 cut(s) | 607, 630, 770 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 756, 791 |
| Bse118I | RCCGGY | 2 cut(s) | 770, 779 |
| Bse3DI | GCAATG | 1 cut(s) | 90 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseAI | TCCGGA | 1 cut(s) | 607 |
| BseCI | ATCGAT | 1 cut(s) | 192 |
| BseDI | CCNNGG | 4 cut(s) | 43, 786, 806, 867 |
| BseGI | GGATG | 2 cut(s) | 253, 319 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 756, 791 |
| BseMI | GCAATG | 1 cut(s) | 90 |
| BseMII | CTCAG | 3 cut(s) | 42, 176, 377 |
| BseRI | GAGGAG | 2 cut(s) | 792, 795 |
| BseXI | GCAGC | 1 cut(s) | 826 |
| BseYI | CCCAGC | 1 cut(s) | 309 |
| BshFI | GGCC | 2 cut(s) | 744, 783 |
| BshNI | GGYRCC | 3 cut(s) | 593, 773, 794 |
| BshTI | ACCGGT | 1 cut(s) | 770 |
| BshVI | ATCGAT | 1 cut(s) | 192 |
| BsiHKAI | GWGCWC | 1 cut(s) | 392 |
| BsiHKCI | CYCGRG | 1 cut(s) | 717 |
| BsiSI | CCGG | 5 cut(s) | 598, 608, 631, 771, 780 |
| BslFI | GGGAC | 1 cut(s) | 735 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 756, 791 |
| BsmAI | GTCTC | 2 cut(s) | 104, 759 |
| BsmFI | GGGAC | 1 cut(s) | 735 |
| BsnI | GGCC | 2 cut(s) | 744, 783 |
| Bso31I | GGTCTC | 1 cut(s) | 104 |
| BsoBI | CYCGRG | 1 cut(s) | 717 |
| Bsp1286I | GDGCHC | 1 cut(s) | 392 |
| Bsp13I | TCCGGA | 1 cut(s) | 607 |
| Bsp19I | CCATGG | 1 cut(s) | 43 |
| BspACI | CCGC | 6 cut(s) | 140, 519, 732, 777, 792, 798 |
| BspANI | GGCC | 2 cut(s) | 744, 783 |
| BspCNI | CTCAG | 3 cut(s) | 43, 175, 378 |
| BspDI | ATCGAT | 1 cut(s) | 192 |
| BspEI | TCCGGA | 1 cut(s) | 607 |
| BspHI | TCATGA | 1 cut(s) | 468 |
| BspLI | GGNNCC | 6 cut(s) | 138, 595, 775, 784, 796, 865 |
| BspPI | GGATC | 7 cut(s) | 74, 108, 119, 188, 224, 457, 666 |
| BspQI | GCTCTTC | 1 cut(s) | 832 |
| BspT107I | GGYRCC | 3 cut(s) | 593, 773, 794 |
| BspTNI | GGTCTC | 1 cut(s) | 104 |
| BsrBI | CCGCTC | 1 cut(s) | 800 |
| BsrDI | GCAATG | 1 cut(s) | 90 |
| BsrFI | RCCGGY | 2 cut(s) | 770, 779 |
| BssAI | RCCGGY | 2 cut(s) | 770, 779 |
| BssECI | CCNNGG | 4 cut(s) | 43, 786, 806, 867 |
| BssNI | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| BssT1I | CCWWGG | 3 cut(s) | 43, 786, 867 |
| Bst4CI | ACNGT | 2 cut(s) | 359, 704 |
| Bst6I | CTCTTC | 1 cut(s) | 832 |
| BstACI | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 580 |
| BstBAI | YACGTR | 1 cut(s) | 686 |
| BstC8I | GCNNGC | 5 cut(s) | 209, 307, 781, 819, 823 |
| BstDEI | CTNAG | 5 cut(s) | 51, 96, 162, 386, 459 |
| BstDSI | CCRYGG | 1 cut(s) | 43 |
| BstF5I | GGATG | 2 cut(s) | 253, 319 |
| BstH2I | RGCGCY | 2 cut(s) | 170, 798 |
| BstHHI | GCGC | 3 cut(s) | 169, 207, 797 |
| BstMAI | GTCTC | 2 cut(s) | 104, 759 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 580, 741, 789 |
| BstNSI | RCATGY | 1 cut(s) | 821 |
| BstSCI | CCNGG | 1 cut(s) | 596 |
| BstSFI | CTRYAG | 1 cut(s) | 588 |
| BstV1I | GCAGC | 1 cut(s) | 826 |
| BstX2I | RGATCY | 4 cut(s) | 66, 100, 238, 462 |
| BstYI | RGATCY | 4 cut(s) | 66, 100, 238, 462 |
| Bsu15I | ATCGAT | 1 cut(s) | 192 |
| BsuRI | GGCC | 2 cut(s) | 744, 783 |
| BsuTUI | ATCGAT | 1 cut(s) | 192 |
| BtgI | CCRYGG | 1 cut(s) | 43 |
| BtsCI | GGATG | 2 cut(s) | 253, 319 |
| BtsI | GCAGTG | 1 cut(s) | 200 |
| BtsIMutI | CAGTG | 2 cut(s) | 200, 364 |
| Cac8I | GCNNGC | 5 cut(s) | 209, 307, 781, 819, 823 |
| CciI | TCATGA | 1 cut(s) | 468 |
| CfoI | GCGC | 3 cut(s) | 169, 207, 797 |
| Cfr10I | RCCGGY | 2 cut(s) | 770, 779 |
| Cfr13I | GGNCC | 3 cut(s) | 782, 864, 871 |
| ClaI | ATCGAT | 1 cut(s) | 192 |
| CseI | GACGC | 4 cut(s) | 47, 538, 572, 749 |
| Csp6I | GTAC | 3 cut(s) | 48, 55, 747 |
| CspAI | ACCGGT | 1 cut(s) | 770 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 841, 876 |
| CviAII | CATG | 6 cut(s) | 44, 393, 421, 469, 756, 818 |
| CviJI | RGCY | 7 cut(s) | 380, 390, 484, 644, 735, 744, 783 |
| CviKI_1 | RGCY | 7 cut(s) | 380, 390, 484, 644, 735, 744, 783 |
| CviQI | GTAC | 3 cut(s) | 48, 55, 747 |
| DdeI | CTNAG | 5 cut(s) | 51, 96, 162, 386, 459 |
| DinI | GGCGCC | 1 cut(s) | 796 |
| EaeI | YGGCCR | 1 cut(s) | 742 |
| Eam1104I | CTCTTC | 1 cut(s) | 832 |
| EarI | CTCTTC | 1 cut(s) | 832 |
| Ecl136II | GAGCTC | 1 cut(s) | 390 |
| Eco130I | CCWWGG | 3 cut(s) | 43, 786, 867 |
| Eco24I | GRGCYC | 1 cut(s) | 392 |
| Eco31I | GGTCTC | 1 cut(s) | 104 |
| Eco47I | GGWCC | 2 cut(s) | 864, 871 |
| Eco53kI | GAGCTC | 1 cut(s) | 390 |
| Eco57I | CTGAAG | 1 cut(s) | 435 |
| Eco72I | CACGTG | 1 cut(s) | 686 |
| Eco88I | CYCGRG | 1 cut(s) | 717 |
| EcoICRI | GAGCTC | 1 cut(s) | 390 |
| EcoT14I | CCWWGG | 3 cut(s) | 43, 786, 867 |
| EcoT38I | GRGCYC | 1 cut(s) | 392 |
| EgeI | GGCGCC | 1 cut(s) | 796 |
| EheI | GGCGCC | 1 cut(s) | 796 |
| ErhI | CCWWGG | 3 cut(s) | 43, 786, 867 |
| FaeI | CATG | 6 cut(s) | 47, 396, 424, 472, 759, 821 |
| FaqI | GGGAC | 1 cut(s) | 735 |
| FatI | CATG | 6 cut(s) | 43, 392, 420, 468, 755, 817 |
| FbaI | TGATCA | 2 cut(s) | 561, 568 |
| Fnu4HI | GCNGC | 5 cut(s) | 733, 777, 793, 798, 815 |
| FokI | GGATG | 2 cut(s) | 260, 326 |
| FriOI | GRGCYC | 1 cut(s) | 392 |
| Fsp4HI | GCNGC | 5 cut(s) | 733, 777, 793, 798, 815 |
| FspBI | CTAG | 3 cut(s) | 144, 711, 877 |
| FspI | TGCGCA | 1 cut(s) | 206 |
| GlaI | GCGC | 3 cut(s) | 168, 206, 796 |
| GluI | GCNGC | 5 cut(s) | 733, 777, 793, 798, 815 |
| GsaI | CCCAGC | 1 cut(s) | 313 |
| HaeII | RGCGCY | 2 cut(s) | 170, 798 |
| HaeIII | GGCC | 2 cut(s) | 744, 783 |
| HapII | CCGG | 5 cut(s) | 598, 608, 631, 771, 780 |
| HgaI | GACGC | 4 cut(s) | 47, 538, 572, 749 |
| HhaI | GCGC | 3 cut(s) | 169, 207, 797 |
| Hin1I | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| Hin1II | CATG | 6 cut(s) | 47, 396, 424, 472, 759, 821 |
| Hin6I | GCGC | 3 cut(s) | 167, 205, 795 |
| HinP1I | GCGC | 3 cut(s) | 167, 205, 795 |
| HinfI | GANTC | 3 cut(s) | 399, 611, 691 |
| HpaII | CCGG | 5 cut(s) | 598, 608, 631, 771, 780 |
| HphI | GGTGA | 1 cut(s) | 689 |
| Hpy166II | GTNNAC | 1 cut(s) | 492 |
| Hpy188I | TCNGA | 5 cut(s) | 73, 105, 323, 648, 810 |
| Hpy188III | TCNNGA | 7 cut(s) | 128, 134, 403, 439, 469, 608, 764 |
| Hpy8I | GTNNAC | 1 cut(s) | 492 |
| Hpy99I | CGWCG | 2 cut(s) | 41, 765 |
| HpyAV | CCTTC | 5 cut(s) | 97, 188, 334, 454, 459 |
| HpyCH4III | ACNGT | 2 cut(s) | 359, 704 |
| HpyCH4IV | ACGT | 2 cut(s) | 30, 685 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 627, 683, 852 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 580, 741, 789 |
| HpyF3I | CTNAG | 5 cut(s) | 51, 96, 162, 386, 459 |
| HpySE526I | ACGT | 2 cut(s) | 30, 685 |
| Hsp92I | GRCGYC | 4 cut(s) | 30, 39, 760, 795 |
| Hsp92II | CATG | 6 cut(s) | 47, 396, 424, 472, 759, 821 |
| HspAI | GCGC | 3 cut(s) | 167, 205, 795 |
| KasI | GGCGCC | 1 cut(s) | 794 |
| Kpn2I | TCCGGA | 1 cut(s) | 607 |
| KroI | GCCGGC | 1 cut(s) | 779 |
| KroNI | GCCGGC | 1 cut(s) | 781 |
| Ksp22I | TGATCA | 2 cut(s) | 561, 568 |
| LguI | GCTCTTC | 1 cut(s) | 832 |
| LmnI | GCTCC | 3 cut(s) | 294, 649, 805 |
| Lsp1109I | GCAGC | 1 cut(s) | 826 |
| LweI | GCATC | 2 cut(s) | 238, 541 |
| MaeI | CTAG | 3 cut(s) | 144, 711, 877 |
| MaeII | ACGT | 2 cut(s) | 30, 685 |
| MbiI | CCGCTC | 1 cut(s) | 800 |
| MboII | GAAGA | 3 cut(s) | 557, 819, 822 |
| MfeI | CAATTG | 1 cut(s) | 622 |
| MflI | RGATCY | 4 cut(s) | 66, 100, 238, 462 |
| MhlI | GDGCHC | 1 cut(s) | 392 |
| MluCI | AATT | 7 cut(s) | 23, 300, 476, 577, 603, 616, 622 |
| Mly113I | GGCGCC | 1 cut(s) | 795 |
| MlyI | GAGTC | 1 cut(s) | 408 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 7 cut(s) | 8, 44, 476, 495, 718, 813, 816 |
| MroI | TCCGGA | 1 cut(s) | 607 |
| MroNI | GCCGGC | 1 cut(s) | 779 |
| MseI | TTAA | 1 cut(s) | 524 |
| MslI | CAYNNNNRTG | 2 cut(s) | 669, 702 |
| MspI | CCGG | 5 cut(s) | 598, 608, 631, 771, 780 |
| MspR9I | CCNGG | 1 cut(s) | 598 |
| MunI | CAATTG | 1 cut(s) | 622 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 580, 741, 789 |
| NaeI | GCCGGC | 1 cut(s) | 781 |
| NarI | GGCGCC | 1 cut(s) | 795 |
| NciI | CCSGG | 1 cut(s) | 598 |
| NcoI | CCATGG | 1 cut(s) | 43 |
| NgoMIV | GCCGGC | 1 cut(s) | 779 |
| NlaIII | CATG | 6 cut(s) | 47, 396, 424, 472, 759, 821 |
| NlaIV | GGNNCC | 6 cut(s) | 138, 595, 775, 784, 796, 865 |
| NsbI | TGCGCA | 1 cut(s) | 206 |
| NspI | RCATGY | 1 cut(s) | 821 |
| OliI | CACNNNNGTG | 1 cut(s) | 702 |
| PaeI | GCATGC | 1 cut(s) | 821 |
| PagI | TCATGA | 1 cut(s) | 468 |
| PciSI | GCTCTTC | 1 cut(s) | 832 |
| PdiI | GCCGGC | 1 cut(s) | 781 |
| PfeI | GAWTC | 2 cut(s) | 611, 691 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 756 |
| PinAI | ACCGGT | 1 cut(s) | 770 |
| PkrI | GCNGC | 5 cut(s) | 734, 778, 794, 799, 816 |
| PleI | GAGTC | 1 cut(s) | 407 |
| PluTI | GGCGCC | 1 cut(s) | 798 |
| PmaCI | CACGTG | 1 cut(s) | 686 |
| PmlI | CACGTG | 1 cut(s) | 686 |
| PpsI | GAGTC | 1 cut(s) | 407 |
| Ppu21I | YACGTR | 1 cut(s) | 686 |
| Psp124BI | GAGCTC | 1 cut(s) | 392 |
| PspCI | CACGTG | 1 cut(s) | 686 |
| PspFI | CCCAGC | 1 cut(s) | 309 |
| PspN4I | GGNNCC | 6 cut(s) | 138, 595, 775, 784, 796, 865 |
| PspPI | GGNCC | 3 cut(s) | 782, 864, 871 |
| PsuI | RGATCY | 4 cut(s) | 66, 100, 238, 462 |
| RsaI | GTAC | 3 cut(s) | 49, 56, 748 |
| RsaNI | GTAC | 3 cut(s) | 48, 55, 747 |
| RseI | CAYNNNNRTG | 2 cut(s) | 669, 702 |
| SacI | GAGCTC | 1 cut(s) | 392 |
| SapI | GCTCTTC | 1 cut(s) | 832 |
| SaqAI | TTAA | 1 cut(s) | 524 |
| SatI | GCNGC | 5 cut(s) | 733, 777, 793, 798, 815 |
| Sau96I | GGNCC | 3 cut(s) | 782, 864, 871 |
| SchI | GAGTC | 1 cut(s) | 408 |
| ScrFI | CCNGG | 1 cut(s) | 598 |
| SduI | GDGCHC | 1 cut(s) | 392 |
| SfaNI | GCATC | 2 cut(s) | 238, 541 |
| SfcI | CTRYAG | 1 cut(s) | 588 |
| SfoI | GGCGCC | 1 cut(s) | 796 |
| SgrAI | CRCCGGYG | 1 cut(s) | 770 |
| SinI | GGWCC | 2 cut(s) | 864, 871 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 669, 702 |
| SmlI | CTYRAG | 1 cut(s) | 485 |
| SmoI | CTYRAG | 1 cut(s) | 485 |
| SphI | GCATGC | 1 cut(s) | 821 |
| Sse9I | AATT | 7 cut(s) | 23, 300, 476, 577, 603, 616, 622 |
| SsiI | CCGC | 6 cut(s) | 140, 519, 732, 777, 792, 798 |
| SspDI | GGCGCC | 1 cut(s) | 794 |
| SspMI | CTAG | 3 cut(s) | 144, 711, 877 |
| SstI | GAGCTC | 1 cut(s) | 392 |
| StyD4I | CCNGG | 1 cut(s) | 596 |
| StyI | CCWWGG | 3 cut(s) | 43, 786, 867 |
| TaaI | ACNGT | 2 cut(s) | 359, 704 |
| TaiI | ACGT | 2 cut(s) | 33, 688 |
| TaqI | TCGA | 8 cut(s) | 36, 192, 281, 345, 402, 426, 440, 763 |
| TaqII | GACCGA | 1 cut(s) | 122 |
| TasI | AATT | 7 cut(s) | 23, 300, 476, 577, 603, 616, 622 |
| TauI | GCSGC | 4 cut(s) | 735, 779, 795, 800 |
| TfiI | GAWTC | 2 cut(s) | 611, 691 |
| Tru1I | TTAA | 1 cut(s) | 524 |
| Tru9I | TTAA | 1 cut(s) | 524 |
| TscAI | CASTG | 2 cut(s) | 207, 364 |
| TseI | GCWGC | 1 cut(s) | 814 |
| TspDTI | ATGAA | 5 cut(s) | 79, 266, 330, 485, 687 |
| TspRI | CASTG | 2 cut(s) | 207, 364 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 756 |
| VpaK11BI | GGWCC | 2 cut(s) | 864, 871 |
| XapI | RAATTY | 3 cut(s) | 23, 577, 603 |
| XceI | RCATGY | 1 cut(s) | 821 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 240 |
| XspI | CTAG | 3 cut(s) | 144, 711, 877 |
| ZraI | GACGTC | 1 cut(s) | 31 |