Rw4G005160

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
10521396 .. 10524600
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G005160.1

Sequence Viewer

Length: 1485 bp
ATGATCCGGATAGTCAGAGAAGACGGACTTGGAGAAATCCATGGGAGCCCACAGGCCACACCTGCAACAGCAGCAGCCTGCATCACCACCTTGCAGCAGCACCTGCAATCCCGCGACGCAACGCTAAGCACAGCTCAGCCCAACCCATCGCTGCCCAGCCAAACCGGCCTTGTCCAGCCCCACAACCGGCCTCTCATCTACACACCACAGTGCCTAAACCGCACACCAATAGCGGCATCCCCGTGCCCACCTCACCGGCCTCCATCTCGATCCGGCGGCTTTCCCAATCGATCCCAGCCCACCAGGCCGAGCACAACAGCCACCAGTCTCCTGCCCCCGCCCGTCTGCAGCAGCATCTGCAAACCAGACGGAGGAGGAAGAAAAGAAAAAGCGAAGAAGAAGACGTCAAAGAAAAAAAAAAAGGGTGACCGGGCCAAAATGGCTGATCCAACTCGACCTGAGTTTGACATTTTGGACTTAGACGGACTTGAGTACCACCGTTGGGTTTCCGATGTAGAAACTGCCTTTGTGGCAAGAGACTACACTGCCACCATCAAAACTCCCACTGACCCCAAAGATGATGGACCGTTTGATAAGGTGAAAGCAAATGCCTTAATGTTTTTGAGGCGACATATTGATCCTAGCCTACGCTGGGAATACCTTCAGTTGAAGACACCCAAAGAACTGTGGGATGCCCTTAAGGGATGTTTTGGGAACATTCATGACACCTTGCTCCCAGAACTGACCGTTCAGTGGAATGAAATCCGCTTGCTTGACTACAAAAGGGTCAATGACTTCAACAAGGAAATGTTGCGCCTAAAGGCACGTCTAAATTTCTGTGGAATGGAAATCACAGAAGATGATATGATCCAGAAGACTTTTTCCAGTTTTCCTACTTCAGCAATTATACTAGCGAACCAGTATAGGCTGGAGTACGATAACAAAATAATCACAACCTTCAACAAGCTGATCAACCTACTGCAAGTGGCTGAGAGGCATAATGAGGTTCTTTTGAACAACAATGCCAGGCCTTTTGGGACAAAGAAAATTCATGAGGCTAATTATGGCAAAGTGAAAGGTGGACAGAACCCCAATGCAAAGGGAGTTGGACGTGCTGATACCTACCCACGTGGCAACAATGCACCACGTGACAAGGGACATGGGGGTCATTATAAGGGCCGTGGAGGCCCTCCCAATGTATGGCACAAAGATGGTGGTGCTGGCCCACCTAAGAACCCTTCAGTCAAACAGAATAGAGTTGGCAATGAACCATGTTATAGGTGTGGAATCATTGGGCGTTGGTACAAGAACTGCCAAGCAAGCAACAGAGTAGCAGCCAATTACAAGAGATATAGGGAGTCTAAAGAACAAGAAACTCACTATATGGAAGAAGGAGACCATGACCCAGATGTCAACCTCACAATTGCAGACCTCAATGGCAATAAGGAACTTGCTCAGTCAATGGATGCACTAGATTTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

494

Amino Acids

55.35

Weight (kDa)

9.31

Isoelectric Point (pI)

51.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AarI CACCTGC 2 cut(s) 70, 111
AasI GACNNNNNNGTC 2 cut(s) 1164, 1409
AatII GACGTC 1 cut(s) 407
Acc36I ACCTGC 2 cut(s) 70, 111
AccB7I CCANNNNNTGG 1 cut(s) 1200
AccII CGCG 1 cut(s) 114
AccIII TCCGGA 1 cut(s) 6
AciI CCGC 6 cut(s) 112, 220, 233, 276, 338, 766
AclWI GGATC 5 cut(s) 264, 285, 440, 632, 862
AcsI RAATTY 2 cut(s) 832, 1047
AcuI CTGAAG 3 cut(s) 647, 882, 1224
AcvI CACGTG 2 cut(s) 1130, 1148
AcyI GRCGYC 1 cut(s) 404
AdeI CACNNNGTG 1 cut(s) 1148
AfaI GTAC 3 cut(s) 494, 935, 1304
AfiI CCNNNNNNNGG 6 cut(s) 186, 371, 502, 652, 753, 1200
AflII CTTAAG 1 cut(s) 698
AgsI TTSAA 4 cut(s) 670, 799, 961, 1015
AjiI CACGTC 2 cut(s) 827, 1112
AjnI CCWGG 2 cut(s) 302, 1025
AjuI GAANNNNNNNTTGG 2 cut(s) 12, 44
AleI CACNNNNGTG 1 cut(s) 208
AluBI AGCT 2 cut(s) 134, 967
AluI AGCT 2 cut(s) 134, 967
Alw21I GWGCWC 1 cut(s) 314
Alw26I GTCTC 3 cut(s) 332, 531, 1389
AlwI GGATC 5 cut(s) 264, 285, 440, 632, 862
AlwNI CAGNNNCTG 2 cut(s) 103, 357
Aor13HI TCCGGA 1 cut(s) 6
ApeKI GCWGC 8 cut(s) 71, 74, 94, 97, 151, 348, 351, 1334
ApoI RAATTY 2 cut(s) 832, 1047
Asp700I GAANNNNTTC 1 cut(s) 660
AspLEI GCGC 1 cut(s) 816
AspS9I GGNCC 5 cut(s) 432, 584, 1177, 1187, 1223
AsuC2I CCSGG 1 cut(s) 431
AsuHPI GGTGA 4 cut(s) 76, 245, 437, 610
AvaII GGWCC 1 cut(s) 584
BaeGI GKGCMC 1 cut(s) 248
BaeI ACNNNNGTAYC 2 cut(s) 476, 509
BanII GRGCYC 1 cut(s) 50
BbrPI CACGTG 2 cut(s) 1130, 1148
BbsI GAAGAC 4 cut(s) 27, 407, 677, 881
Bbv12I GWGCWC 1 cut(s) 314
BbvI GCAGC 8 cut(s) 83, 86, 106, 109, 138, 360, 363, 1346
BccI CCATC 5 cut(s) 154, 271, 560, 575, 1205
BceAI ACGGC 1 cut(s) 1164
BciT130I CCWGG 2 cut(s) 304, 1027
BclI TGATCA 1 cut(s) 969
BcnI CCSGG 1 cut(s) 431
BcoDI GTCTC 3 cut(s) 332, 531, 1389
BfaI CTAG 3 cut(s) 642, 911, 1472
BfmI CTRYAG 1 cut(s) 346
BfrI CTTAAG 1 cut(s) 698
BfuAI ACCTGC 2 cut(s) 70, 111
BglI GCCNNNNNGGC 5 cut(s) 165, 304, 440, 530, 1185
BlpI GCTNAGC 2 cut(s) 125, 135
Bme1390I CCNGG 3 cut(s) 304, 431, 1027
Bme18I GGWCC 1 cut(s) 584
BmgBI CACGTC 2 cut(s) 827, 1112
BmgT120I GGNCC 5 cut(s) 432, 584, 1177, 1187, 1223
BmiI GGNNCC 1 cut(s) 47
BmrFI CCNGG 3 cut(s) 304, 431, 1027
BmsI GCATC 5 cut(s) 90, 245, 363, 682, 1456
BpiI GAAGAC 4 cut(s) 27, 407, 677, 881
BpmI CTGGAG 1 cut(s) 950
Bpu1102I GCTNAGC 2 cut(s) 125, 135
BpuEI CTTGAG 1 cut(s) 509
BpuMI CCSGG 1 cut(s) 431
Bsa29I ATCGAT 1 cut(s) 289
BsaAI YACGTR 2 cut(s) 1130, 1148
BsaHI GRCGYC 1 cut(s) 404
BsaI GGTCTC 1 cut(s) 1389
BsaJI CCNNGG 2 cut(s) 40, 1180
BsaWI WCCGGW 1 cut(s) 6
Bsc4I CCNNNNNNNGG 6 cut(s) 186, 371, 502, 652, 753, 1200
Bse118I RCCGGY 3 cut(s) 164, 186, 255
Bse1I ACTGG 3 cut(s) 324, 885, 919
Bse3DI GCAATG 1 cut(s) 1270
BseAI TCCGGA 1 cut(s) 6
BseBI CCWGG 2 cut(s) 304, 1027
BseCI ATCGAT 1 cut(s) 289
BseDI CCNNGG 2 cut(s) 40, 1180
BseGI GGATG 4 cut(s) 236, 697, 710, 1471
BseLI CCNNNNNNNGG 6 cut(s) 186, 371, 502, 652, 753, 1200
BseMI GCAATG 1 cut(s) 1270
BseMII CTCAG 4 cut(s) 149, 450, 981, 1469
BseNI ACTGG 3 cut(s) 324, 885, 919
BseRI GAGGAG 1 cut(s) 387
BseSI GKGCMC 1 cut(s) 248
BseXI GCAGC 8 cut(s) 83, 86, 106, 109, 138, 360, 363, 1346
BseYI CCCAGC 3 cut(s) 155, 294, 651
Bsh1236I CGCG 1 cut(s) 114
BshVI ATCGAT 1 cut(s) 289
BsiHKAI GWGCWC 1 cut(s) 314
BsiSI CCGG 6 cut(s) 7, 165, 187, 256, 273, 430
BslFI GGGAC 2 cut(s) 1051, 1170
BslI CCNNNNNNNGG 6 cut(s) 186, 371, 502, 652, 753, 1200
BsmAI GTCTC 3 cut(s) 332, 531, 1389
BsmFI GGGAC 2 cut(s) 1051, 1170
Bso31I GGTCTC 1 cut(s) 1389
Bsp1286I GDGCHC 3 cut(s) 50, 248, 314
Bsp13I TCCGGA 1 cut(s) 6
Bsp143I GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
Bsp1720I GCTNAGC 2 cut(s) 125, 135
Bsp19I CCATGG 1 cut(s) 40
BspACI CCGC 6 cut(s) 112, 220, 233, 276, 338, 766
BspCNI CTCAG 4 cut(s) 148, 451, 982, 1468
BspDI ATCGAT 1 cut(s) 289
BspEI TCCGGA 1 cut(s) 6
BspFNI CGCG 1 cut(s) 114
BspHI TCATGA 2 cut(s) 721, 1051
BspLI GGNNCC 1 cut(s) 47
BspMAI CTGCAG 1 cut(s) 350
BspMI ACCTGC 2 cut(s) 70, 111
BspPI GGATC 5 cut(s) 264, 285, 440, 632, 862
BspTI CTTAAG 1 cut(s) 698
BspTNI GGTCTC 1 cut(s) 1389
BsrDI GCAATG 1 cut(s) 1270
BsrFI RCCGGY 3 cut(s) 164, 186, 255
BsrI ACTGG 3 cut(s) 324, 885, 919
BssAI RCCGGY 3 cut(s) 164, 186, 255
BssECI CCNNGG 2 cut(s) 40, 1180
BssMI GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
BssNI GRCGYC 1 cut(s) 404
BssT1I CCWWGG 1 cut(s) 40
Bst2UI CCWGG 2 cut(s) 304, 1027
Bst4CI ACNGT 5 cut(s) 210, 500, 588, 687, 748
BstACI GRCGYC 1 cut(s) 404
BstAFI CTTAAG 1 cut(s) 698
BstAPI GCANNNNNTGC 2 cut(s) 103, 357
BstBAI YACGTR 2 cut(s) 1130, 1148
BstC8I GCNNGC 4 cut(s) 79, 770, 1222, 1321
BstDEI CTNAG 7 cut(s) 125, 135, 459, 478, 990, 1230, 1455
BstDSI CCRYGG 2 cut(s) 40, 1180
BstEII GGTNACC 1 cut(s) 425
BstF5I GGATG 4 cut(s) 236, 697, 710, 1471
BstFNI CGCG 1 cut(s) 114
BstHHI GCGC 1 cut(s) 816
BstKTI GATC 7 cut(s) 6, 272, 293, 448, 640, 870, 972
BstMAI GTCTC 3 cut(s) 332, 531, 1389
BstMBI GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
BstNI CCWGG 2 cut(s) 304, 1027
BstPI GGTNACC 1 cut(s) 425
BstSCI CCNGG 3 cut(s) 302, 429, 1025
BstSFI CTRYAG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 248
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 8 cut(s) 83, 86, 106, 109, 138, 360, 363, 1346
BstV2I GAAGAC 4 cut(s) 27, 407, 677, 881
Bsu15I ATCGAT 1 cut(s) 289
BsuTUI ATCGAT 1 cut(s) 289
BtgI CCRYGG 2 cut(s) 40, 1180
BtgZI GCGATG 1 cut(s) 132
BtrI CACGTC 2 cut(s) 827, 1112
BtsCI GGATG 4 cut(s) 236, 697, 710, 1471
BtsI GCAGTG 1 cut(s) 543
BtsIMutI CAGTG 4 cut(s) 215, 543, 564, 758
BveI ACCTGC 2 cut(s) 70, 111
Cac8I GCNNGC 4 cut(s) 79, 770, 1222, 1321
CaiI CAGNNNCTG 2 cut(s) 103, 357
CciI TCATGA 2 cut(s) 721, 1051
CfoI GCGC 1 cut(s) 816
Cfr10I RCCGGY 3 cut(s) 164, 186, 255
Cfr13I GGNCC 5 cut(s) 432, 584, 1177, 1187, 1223
ClaI ATCGAT 1 cut(s) 289
CseI GACGC 1 cut(s) 125
Csp6I GTAC 3 cut(s) 493, 934, 1303
CspCI CAANNNNNGTGG 2 cut(s) 1195, 1230
CviAII CATG 6 cut(s) 41, 722, 1052, 1160, 1272, 1400
CviQI GTAC 3 cut(s) 493, 934, 1303
DdeI CTNAG 7 cut(s) 125, 135, 459, 478, 990, 1230, 1455
DpnI GATC 7 cut(s) 5, 271, 292, 447, 639, 869, 971
DpnII GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
DraIII CACNNNGTG 1 cut(s) 1148
DrdI GACNNNNNNGTC 2 cut(s) 1164, 1409
DseDI GACNNNNNNGTC 2 cut(s) 1164, 1409
Eco130I CCWWGG 1 cut(s) 40
Eco147I AGGCCT 1 cut(s) 1030
Eco24I GRGCYC 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 1389
Eco47I GGWCC 1 cut(s) 584
Eco57I CTGAAG 3 cut(s) 647, 882, 1224
Eco72I CACGTG 2 cut(s) 1130, 1148
Eco91I GGTNACC 1 cut(s) 425
EcoO109I RGGNCCY 1 cut(s) 1187
EcoO65I GGTNACC 1 cut(s) 425
EcoRII CCWGG 2 cut(s) 302, 1025
EcoT14I CCWWGG 1 cut(s) 40
EcoT38I GRGCYC 1 cut(s) 50
ErhI CCWWGG 1 cut(s) 40
FaeI CATG 6 cut(s) 44, 725, 1055, 1163, 1275, 1403
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FaqI GGGAC 2 cut(s) 1051, 1170
FatI CATG 6 cut(s) 40, 721, 1051, 1159, 1271, 1399
FauI CCCGC 2 cut(s) 119, 345
FbaI TGATCA 1 cut(s) 969
FokI GGATG 4 cut(s) 223, 704, 717, 1478
FriOI GRGCYC 1 cut(s) 50
FspBI CTAG 3 cut(s) 642, 911, 1472
GlaI GCGC 1 cut(s) 815
GsaI CCCAGC 3 cut(s) 159, 298, 655
GsuI CTGGAG 1 cut(s) 950
HapII CCGG 6 cut(s) 7, 165, 187, 256, 273, 430
HgaI GACGC 1 cut(s) 125
HhaI GCGC 1 cut(s) 816
Hin1I GRCGYC 1 cut(s) 404
Hin1II CATG 6 cut(s) 44, 725, 1055, 1163, 1275, 1403
Hin6I GCGC 1 cut(s) 814
HinP1I GCGC 1 cut(s) 814
HincII GTYRAC 1 cut(s) 1414
HindII GTYRAC 1 cut(s) 1414
HinfI GANTC 2 cut(s) 1287, 1358
HpaII CCGG 6 cut(s) 7, 165, 187, 256, 273, 430
HphI GGTGA 4 cut(s) 76, 245, 437, 610
Hpy166II GTNNAC 2 cut(s) 1082, 1414
Hpy188I TCNGA 2 cut(s) 17, 511
Hpy188III TCNNGA 5 cut(s) 7, 267, 722, 871, 1052
Hpy8I GTNNAC 2 cut(s) 1082, 1414
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 4 cut(s) 671, 967, 1248, 1385
HpyCH4III ACNGT 5 cut(s) 210, 500, 588, 687, 748
HpyCH4IV ACGT 5 cut(s) 404, 826, 1111, 1129, 1147
HpyF3I CTNAG 7 cut(s) 125, 135, 459, 478, 990, 1230, 1455
HpySE526I ACGT 5 cut(s) 404, 826, 1111, 1129, 1147
Hsp92I GRCGYC 1 cut(s) 404
Hsp92II CATG 6 cut(s) 44, 725, 1055, 1163, 1275, 1403
HspAI GCGC 1 cut(s) 814
Kpn2I TCCGGA 1 cut(s) 6
Ksp22I TGATCA 1 cut(s) 969
Kzo9I GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
LmnI GCTCC 2 cut(s) 45, 738
Lsp1109I GCAGC 8 cut(s) 83, 86, 106, 109, 138, 360, 363, 1346
LweI GCATC 5 cut(s) 90, 245, 363, 682, 1456
MaeI CTAG 3 cut(s) 642, 911, 1472
MaeII ACGT 5 cut(s) 404, 826, 1111, 1129, 1147
MaeIII GTNAC 2 cut(s) 425, 1148
MalI GATC 7 cut(s) 5, 271, 292, 447, 639, 869, 971
MboI GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
MboII GAAGA 9 cut(s) 32, 390, 406, 409, 412, 682, 869, 886, 1400
MfeI CAATTG 1 cut(s) 1422
MhlI GDGCHC 3 cut(s) 50, 248, 314
MluCI AATT 6 cut(s) 832, 903, 1047, 1060, 1339, 1422
MlyI GAGTC 1 cut(s) 1367
MmeI TCCRAC 2 cut(s) 473, 1087
MroI TCCGGA 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 660
MseI TTAA 2 cut(s) 614, 699
MslI CAYNNNNRTG 3 cut(s) 208, 241, 1209
MspCI CTTAAG 1 cut(s) 698
MspI CCGG 6 cut(s) 7, 165, 187, 256, 273, 430
MspR9I CCNGG 3 cut(s) 304, 431, 1027
MunI CAATTG 1 cut(s) 1422
MvaI CCWGG 2 cut(s) 304, 1027
MvnI CGCG 1 cut(s) 114
NciI CCSGG 1 cut(s) 431
NcoI CCATGG 1 cut(s) 40
NdeII GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
NlaIII CATG 6 cut(s) 44, 725, 1055, 1163, 1275, 1403
NlaIV GGNNCC 1 cut(s) 47
NmeAIII GCCGAG 1 cut(s) 333
NmuCI GTSAC 2 cut(s) 425, 1148
OliI CACNNNNGTG 1 cut(s) 208
PagI TCATGA 2 cut(s) 721, 1051
PaqCI CACCTGC 2 cut(s) 70, 111
PceI AGGCCT 1 cut(s) 1030
PdmI GAANNNNTTC 1 cut(s) 660
PfeI GAWTC 1 cut(s) 1287
PflMI CCANNNNNTGG 1 cut(s) 1200
PleI GAGTC 1 cut(s) 1366
PmaCI CACGTG 2 cut(s) 1130, 1148
PmlI CACGTG 2 cut(s) 1130, 1148
PpsI GAGTC 1 cut(s) 1366
Ppu21I YACGTR 2 cut(s) 1130, 1148
PsiI TTATAA 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 302, 1025
PspCI CACGTG 2 cut(s) 1130, 1148
PspEI GGTNACC 1 cut(s) 425
PspFI CCCAGC 3 cut(s) 155, 294, 651
PspGI CCWGG 2 cut(s) 302, 1025
PspN4I GGNNCC 1 cut(s) 47
PspPI GGNCC 5 cut(s) 432, 584, 1177, 1187, 1223
PstI CTGCAG 1 cut(s) 350
PstNI CAGNNNCTG 2 cut(s) 103, 357
RsaI GTAC 3 cut(s) 494, 935, 1304
RsaNI GTAC 3 cut(s) 493, 934, 1303
RseI CAYNNNNRTG 3 cut(s) 208, 241, 1209
SaqAI TTAA 2 cut(s) 614, 699
Sau3AI GATC 7 cut(s) 3, 269, 290, 445, 637, 867, 969
Sau96I GGNCC 5 cut(s) 432, 584, 1177, 1187, 1223
SchI GAGTC 1 cut(s) 1367
ScrFI CCNGG 3 cut(s) 304, 431, 1027
SduI GDGCHC 3 cut(s) 50, 248, 314
SfaNI GCATC 5 cut(s) 90, 245, 363, 682, 1456
SfcI CTRYAG 1 cut(s) 346
SfiI GGCCNNNNNGGCC 1 cut(s) 1185
SinI GGWCC 1 cut(s) 584
SmiMI CAYNNNNRTG 3 cut(s) 208, 241, 1209
SmlI CTYRAG 2 cut(s) 488, 698
SmoI CTYRAG 2 cut(s) 488, 698
Sse9I AATT 6 cut(s) 832, 903, 1047, 1060, 1339, 1422
SseBI AGGCCT 1 cut(s) 1030
SsiI CCGC 6 cut(s) 112, 220, 233, 276, 338, 766
SspMI CTAG 3 cut(s) 642, 911, 1472
StuI AGGCCT 1 cut(s) 1030
StyD4I CCNGG 3 cut(s) 302, 429, 1025
StyI CCWWGG 1 cut(s) 40
TaaI ACNGT 5 cut(s) 210, 500, 588, 687, 748
TaiI ACGT 5 cut(s) 407, 829, 1114, 1132, 1150
TaqI TCGA 3 cut(s) 268, 289, 454
TasI AATT 6 cut(s) 832, 903, 1047, 1060, 1339, 1422
TauI GCSGC 2 cut(s) 236, 279
TfiI GAWTC 1 cut(s) 1287
Tru1I TTAA 2 cut(s) 614, 699
Tru9I TTAA 2 cut(s) 614, 699
TscAI CASTG 4 cut(s) 215, 550, 571, 758
TseFI GTSAC 2 cut(s) 425, 1148
TseI GCWGC 8 cut(s) 71, 74, 94, 97, 151, 348, 351, 1334
Tsp45I GTSAC 2 cut(s) 425, 1148
TspDTI ATGAA 4 cut(s) 710, 774, 1040, 1281
TspGWI ACGGA 3 cut(s) 39, 384, 498
TspRI CASTG 4 cut(s) 215, 550, 571, 758
Van91I CCANNNNNTGG 1 cut(s) 1200
Vha464I CTTAAG 1 cut(s) 698
VpaK11BI GGWCC 1 cut(s) 584
XapI RAATTY 2 cut(s) 832, 1047
XmnI GAANNNNTTC 1 cut(s) 660
XspI CTAG 3 cut(s) 642, 911, 1472
ZraI GACGTC 1 cut(s) 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.