Rmu_sc0013205.1_g000004

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013205.1
Physical Location & Seq
Forward (+)
29293 .. 33320
4028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013205.1_g000004.1.cds

Sequence Viewer

Length: 1098 bp
atgcagcctggcctcagcatccctccagacaggcctccagtgtgcccagtcggatcgcctgctgctgcactgagtacctacacaacagcccatccccgcgcggcccctgcaaacccagcaacgcacgacaactccactgccataccggatcacccaagtctccggatccacaccgacgccgtcgaacagacccagggcgccctcaaccctcacctttccctacgctggaagtaccttcagttgaagacacccaaagaactgtgggatgcccttaagggacattttgggaacattcatgacactttgctcccagaactggccgttcagtggaatggaatccacttgcttgactacaaaagggtcaatgacttcaacaaggacatgttgtgcctaaaggcacgtctaaatttctgtggaaaagaactcacagaagatgatatgatccagaagactctttccacttttcctacttcagcaattatactagcgaaccagtataggttggagtatgataacaaaagaatcacaaccttcaacaagctgatcaacctactgcaagtggctgagagacataatgaggttctgttaaacaacaatgccaggcctgttggaacaaagaaacttcctgaggataattatggcaaagtgaaagatggaaagaaccctaatgcaaagggggttggacgtgctgatccctacccacgtggcaacaatgcaccacgtggcaagggacatgggggtcgtgatatgggccgtggaggccctcccaatgtatggcgcagagatgggggtgctggccctagtgaatgcagaccattcaagtactttatggttccggtggatgctttgacacactgctcacgtgtcgctttattgtccacaagaaatgctgcaaaactcctagcacagattatacgtttaagggctcaccaccctgatcaccctcttaagtctataaggcttgataacgctagcactactacaaaaaggtcatcagacgacggtgaatttgtgttgtgtgatgaccaagctcactgtggtctaagtgagtgtcgtgtgattaaaacatcagacaacggtgatttcaccgttgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

365

Amino Acids

40.37

Weight (kDa)

9.19

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000014)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g26151 FvH4_2g03832 FvH4_3g14381 FvH4_3g36310 FvH4_4g03324 FvH4_4g13931 FvH4_4g13991 FvH4_4g21832 FvH4_5g23602 FvH4_5g28592 FvH4_6g20101 FvH4_6g39333 FvH4_6g44543 FvH4_7g01912 FvH4_7g03871 FvH4_7g13221
rosa_chinensis RchiOBHm_Chr1g0352481 RchiOBHm_Chr2g0094711 RchiOBHm_Chr3g0463131 RchiOBHm_Chr6g0266441
rosa_multiflora Rmu_co7985570.1_g000001 Rmu_co7989700.1_g000001 Rmu_co8078240.1_g000001 Rmu_co8151186.1_g000001 Rmu_co8171032.1_g000001 Rmu_co8187528.1_g000001 Rmu_co8212542.1_g000001 Rmu_co8215704.1_g000001 Rmu_co8229975.1_g000001 Rmu_co8304281.1_g000001 Rmu_co8342199.1_g000001 Rmu_co8350629.1_g000001 Rmu_co8425511.1_g000001 Rmu_co8504337.1_g000002 Rmu_sc0000008.1_g000001 Rmu_sc0000030.1_g000038 Rmu_sc0000041.1_g000023 Rmu_sc0000063.1_g000022 Rmu_sc0000076.1_g000002 Rmu_sc0000103.1_g000049 Rmu_sc0000117.1_g000035 Rmu_sc0000144.1_g000049 Rmu_sc0000147.1_g000064 Rmu_sc0000148.1_g000050 Rmu_sc0000148.1_g000062 Rmu_sc0000149.1_g000012 Rmu_sc0000159.1_g000002 Rmu_sc0000167.1_g000003 Rmu_sc0000178.1_g000012 Rmu_sc0000199.1_g000009 Rmu_sc0000215.1_g000002 Rmu_sc0000234.1_g000004 Rmu_sc0000235.1_g000058 Rmu_sc0000239.1_g000040 Rmu_sc0000245.1_g000008 Rmu_sc0000288.1_g000047 Rmu_sc0000305.1_g000009 Rmu_sc0000335.1_g000062 Rmu_sc0000335.1_g000063 Rmu_sc0000360.1_g000041 Rmu_sc0000365.1_g000029 Rmu_sc0000366.1_g000044 Rmu_sc0000367.1_g000215 Rmu_sc0000382.1_g000019 Rmu_sc0000388.1_g000065 Rmu_sc0000399.1_g000021 Rmu_sc0000420.1_g000024 Rmu_sc0000429.1_g000026 Rmu_sc0000441.1_g000009 Rmu_sc0000461.1_g000023 Rmu_sc0000484.1_g000002 Rmu_sc0000487.1_g000072 Rmu_sc0000489.1_g000006 Rmu_sc0000493.1_g000056 Rmu_sc0000516.1_g000015 Rmu_sc0000516.1_g000069 Rmu_sc0000533.1_g000036 Rmu_sc0000535.1_g000013 Rmu_sc0000538.1_g000046 Rmu_sc0000543.1_g000056 Rmu_sc0000596.1_g000056 Rmu_sc0000605.1_g000013 Rmu_sc0000651.1_g000001 Rmu_sc0000689.1_g000022 Rmu_sc0000696.1_g000012 Rmu_sc0000704.1_g000032 Rmu_sc0000730.1_g000020 Rmu_sc0000744.1_g000013 Rmu_sc0000744.1_g000020 Rmu_sc0000744.1_g000165 Rmu_sc0000750.1_g000004 Rmu_sc0000753.1_g000035 Rmu_sc0000770.1_g000047 Rmu_sc0000774.1_g000009 Rmu_sc0000775.1_g000019 Rmu_sc0000780.1_g000008 Rmu_sc0000791.1_g000052 Rmu_sc0000792.1_g000011 Rmu_sc0000795.1_g000009 Rmu_sc0000796.1_g000032 Rmu_sc0000805.1_g000045 Rmu_sc0000806.1_g000013 Rmu_sc0000806.1_g000023 Rmu_sc0000813.1_g000005 Rmu_sc0000820.1_g000014 Rmu_sc0000834.1_g000001 Rmu_sc0000834.1_g000013 Rmu_sc0000837.1_g000076 Rmu_sc0000847.1_g000025 Rmu_sc0000851.1_g000011 Rmu_sc0000857.1_g000037 Rmu_sc0000857.1_g000048 Rmu_sc0000857.1_g000049 Rmu_sc0000911.1_g000006 Rmu_sc0000920.1_g000010 Rmu_sc0000924.1_g000006 Rmu_sc0000962.1_g000029 Rmu_sc0000989.1_g000001 Rmu_sc0001011.1_g000005 Rmu_sc0001011.1_g000006 Rmu_sc0001017.1_g000011 Rmu_sc0001017.1_g000012 Rmu_sc0001017.1_g000015 Rmu_sc0001051.1_g000036 Rmu_sc0001053.1_g000002 Rmu_sc0001059.1_g000017 Rmu_sc0001067.1_g000004 Rmu_sc0001124.1_g000018 Rmu_sc0001124.1_g000022 Rmu_sc0001159.1_g000037 Rmu_sc0001159.1_g000038 Rmu_sc0001167.1_g000062 Rmu_sc0001167.1_g000063 Rmu_sc0001179.1_g000043 Rmu_sc0001195.1_g000024 Rmu_sc0001207.1_g000010 Rmu_sc0001207.1_g000046 Rmu_sc0001218.1_g000034 Rmu_sc0001227.1_g000034 Rmu_sc0001244.1_g000016 Rmu_sc0001262.1_g000007 Rmu_sc0001291.1_g000030 Rmu_sc0001298.1_g000023 Rmu_sc0001298.1_g000031 Rmu_sc0001301.1_g000007 Rmu_sc0001304.1_g000012 Rmu_sc0001304.1_g000013 Rmu_sc0001336.1_g000010 Rmu_sc0001336.1_g000034 Rmu_sc0001353.1_g000027 Rmu_sc0001425.1_g000020 Rmu_sc0001430.1_g000002 Rmu_sc0001433.1_g000006 Rmu_sc0001443.1_g000009 Rmu_sc0001468.1_g000019 Rmu_sc0001493.1_g000079 Rmu_sc0001493.1_g000080 Rmu_sc0001516.1_g000059 Rmu_sc0001524.1_g000019 Rmu_sc0001524.1_g000064 Rmu_sc0001524.1_g000065 Rmu_sc0001552.1_g000002 Rmu_sc0001552.1_g000031 Rmu_sc0001605.1_g000008 Rmu_sc0001623.1_g000010 Rmu_sc0001626.1_g000039 Rmu_sc0001631.1_g000026 Rmu_sc0001636.1_g000010 Rmu_sc0001649.1_g000003 Rmu_sc0001662.1_g000006 Rmu_sc0001694.1_g000055 Rmu_sc0001698.1_g000007 Rmu_sc0001702.1_g000019 Rmu_sc0001702.1_g000022 Rmu_sc0001721.1_g000008 Rmu_sc0001742.1_g000008 Rmu_sc0001755.1_g000034 Rmu_sc0001759.1_g000014 Rmu_sc0001772.1_g000055 Rmu_sc0001822.1_g000019 Rmu_sc0001824.1_g000002 Rmu_sc0001849.1_g000017 Rmu_sc0001852.1_g000015 Rmu_sc0001855.1_g000003 Rmu_sc0001855.1_g000024 Rmu_sc0001860.1_g000019 Rmu_sc0001861.1_g000087 Rmu_sc0001861.1_g000088 Rmu_sc0001863.1_g000021 Rmu_sc0001870.1_g000011 Rmu_sc0001870.1_g000016 Rmu_sc0001872.1_g000002 Rmu_sc0001880.1_g000039 Rmu_sc0001896.1_g000020 Rmu_sc0001962.1_g000041 Rmu_sc0001966.1_g000028 Rmu_sc0001992.1_g000003 Rmu_sc0002016.1_g000012 Rmu_sc0002016.1_g000044 Rmu_sc0002038.1_g000012 Rmu_sc0002040.1_g000076 Rmu_sc0002041.1_g000008 Rmu_sc0002107.1_g000003 Rmu_sc0002130.1_g000008 Rmu_sc0002132.1_g000037 Rmu_sc0002170.1_g000048 Rmu_sc0002205.1_g000054 Rmu_sc0002207.1_g000013 Rmu_sc0002230.1_g000022 Rmu_sc0002235.1_g000033 Rmu_sc0002248.1_g000041 Rmu_sc0002260.1_g000018 Rmu_sc0002266.1_g000024 Rmu_sc0002283.1_g000058 Rmu_sc0002292.1_g000009 Rmu_sc0002332.1_g000008 Rmu_sc0002349.1_g000023 Rmu_sc0002372.1_g000037 Rmu_sc0002401.1_g000022 Rmu_sc0002451.1_g000037 Rmu_sc0002460.1_g000045 Rmu_sc0002460.1_g000063 Rmu_sc0002506.1_g000020 Rmu_sc0002509.1_g000016 Rmu_sc0002522.1_g000018 Rmu_sc0002522.1_g000019 Rmu_sc0002525.1_g000005 Rmu_sc0002539.1_g000104 Rmu_sc0002548.1_g000010 Rmu_sc0002563.1_g000034 Rmu_sc0002571.1_g000002 Rmu_sc0002586.1_g000018 Rmu_sc0002658.1_g000034 Rmu_sc0002672.1_g000002 Rmu_sc0002672.1_g000003 Rmu_sc0002672.1_g000004 Rmu_sc0002685.1_g000006 Rmu_sc0002687.1_g000011 Rmu_sc0002699.1_g000021 Rmu_sc0002701.1_g000055 Rmu_sc0002736.1_g000005 Rmu_sc0002741.1_g000014 Rmu_sc0002808.1_g000011 Rmu_sc0002852.1_g000006 Rmu_sc0002855.1_g000001 Rmu_sc0002868.1_g000032 Rmu_sc0002877.1_g000022 Rmu_sc0002907.1_g000007 Rmu_sc0002908.1_g000002 Rmu_sc0002917.1_g000002 Rmu_sc0002927.1_g000011 Rmu_sc0002942.1_g000013 Rmu_sc0002995.1_g000021 Rmu_sc0003002.1_g000063 Rmu_sc0003032.1_g000017 Rmu_sc0003035.1_g000001 Rmu_sc0003040.1_g000015 Rmu_sc0003110.1_g000013 Rmu_sc0003158.1_g000008 Rmu_sc0003180.1_g000010 Rmu_sc0003207.1_g000035 Rmu_sc0003214.1_g000006 Rmu_sc0003221.1_g000085 Rmu_sc0003222.1_g000011 Rmu_sc0003233.1_g000016 Rmu_sc0003233.1_g000017 Rmu_sc0003233.1_g000037 Rmu_sc0003279.1_g000010 Rmu_sc0003282.1_g000003 Rmu_sc0003291.1_g000024 Rmu_sc0003317.1_g000009 Rmu_sc0003419.1_g000015 Rmu_sc0003441.1_g000052 Rmu_sc0003448.1_g000001 Rmu_sc0003456.1_g000012 Rmu_sc0003499.1_g000015 Rmu_sc0003500.1_g000030 Rmu_sc0003588.1_g000012 Rmu_sc0003588.1_g000013 Rmu_sc0003600.1_g000003 Rmu_sc0003601.1_g000007 Rmu_sc0003627.1_g000002 Rmu_sc0003629.1_g000047 Rmu_sc0003673.1_g000028 Rmu_sc0003690.1_g000013 Rmu_sc0003708.1_g000001 Rmu_sc0003711.1_g000019 Rmu_sc0003758.1_g000005 Rmu_sc0003767.1_g000025 Rmu_sc0003832.1_g000036 Rmu_sc0003882.1_g000056 Rmu_sc0003981.1_g000019 Rmu_sc0003991.1_g000006 Rmu_sc0004045.1_g000013 Rmu_sc0004076.1_g000030 Rmu_sc0004126.1_g000006 Rmu_sc0004154.1_g000002 Rmu_sc0004193.1_g000015 Rmu_sc0004275.1_g000023 Rmu_sc0004311.1_g000027 Rmu_sc0004362.1_g000011 Rmu_sc0004380.1_g000011 Rmu_sc0004432.1_g000013 Rmu_sc0004478.1_g000001 Rmu_sc0004520.1_g000018 Rmu_sc0004602.1_g000034 Rmu_sc0004614.1_g000011 Rmu_sc0004638.1_g000026 Rmu_sc0004655.1_g000013 Rmu_sc0004657.1_g000056 Rmu_sc0004657.1_g000057 Rmu_sc0004705.1_g000032 Rmu_sc0004736.1_g000004 Rmu_sc0004742.1_g000006 Rmu_sc0004849.1_g000009 Rmu_sc0004876.1_g000041 Rmu_sc0004888.1_g000061 Rmu_sc0004890.1_g000014 Rmu_sc0004927.1_g000028 Rmu_sc0004928.1_g000024 Rmu_sc0004959.1_g000008 Rmu_sc0004959.1_g000009 Rmu_sc0004964.1_g000022 Rmu_sc0004969.1_g000012 Rmu_sc0004969.1_g000013 Rmu_sc0005010.1_g000016 Rmu_sc0005016.1_g000020 Rmu_sc0005047.1_g000009 Rmu_sc0005063.1_g000023 Rmu_sc0005065.1_g000020 Rmu_sc0005093.1_g000015 Rmu_sc0005124.1_g000013 Rmu_sc0005125.1_g000036 Rmu_sc0005129.1_g000014 Rmu_sc0005142.1_g000024 Rmu_sc0005220.1_g000036 Rmu_sc0005234.1_g000007 Rmu_sc0005237.1_g000016 Rmu_sc0005251.1_g000009 Rmu_sc0005251.1_g000014 Rmu_sc0005255.1_g000032 Rmu_sc0005278.1_g000008 Rmu_sc0005292.1_g000038 Rmu_sc0005292.1_g000039 Rmu_sc0005307.1_g000027 Rmu_sc0005309.1_g000008 Rmu_sc0005350.1_g000013 Rmu_sc0005376.1_g000007 Rmu_sc0005378.1_g000038 Rmu_sc0005378.1_g000044 Rmu_sc0005378.1_g000048 Rmu_sc0005378.1_g000049 Rmu_sc0005446.1_g000029 Rmu_sc0005566.1_g000005 Rmu_sc0005571.1_g000012 Rmu_sc0005639.1_g000021 Rmu_sc0005657.1_g000049 Rmu_sc0005657.1_g000065 Rmu_sc0005659.1_g000001 Rmu_sc0005659.1_g000037 Rmu_sc0005697.1_g000026 Rmu_sc0005781.1_g000033 Rmu_sc0005791.1_g000008 Rmu_sc0005806.1_g000002 Rmu_sc0005836.1_g000003 Rmu_sc0005856.1_g000017 Rmu_sc0005930.1_g000001 Rmu_sc0005935.1_g000001 Rmu_sc0006016.1_g000003 Rmu_sc0006016.1_g000004 Rmu_sc0006112.1_g000010 Rmu_sc0006153.1_g000058 Rmu_sc0006176.1_g000008 Rmu_sc0006313.1_g000015 Rmu_sc0006325.1_g000015 Rmu_sc0006326.1_g000038 Rmu_sc0006336.1_g000006 Rmu_sc0006400.1_g000004 Rmu_sc0006416.1_g000009 Rmu_sc0006464.1_g000004 Rmu_sc0006529.1_g000001 Rmu_sc0006561.1_g000037 Rmu_sc0006583.1_g000025 Rmu_sc0006594.1_g000014 Rmu_sc0006658.1_g000001 Rmu_sc0006662.1_g000015 Rmu_sc0006736.1_g000034 Rmu_sc0006758.1_g000018 Rmu_sc0006758.1_g000019 Rmu_sc0006838.1_g000010 Rmu_sc0006838.1_g000011 Rmu_sc0006888.1_g000054 Rmu_sc0006981.1_g000006 Rmu_sc0007026.1_g000001 Rmu_sc0007075.1_g000014 Rmu_sc0007490.1_g000025 Rmu_sc0007503.1_g000001 Rmu_sc0007503.1_g000008 Rmu_sc0007605.1_g000002 Rmu_sc0007727.1_g000029 Rmu_sc0007740.1_g000002 Rmu_sc0007777.1_g000016 Rmu_sc0007785.1_g000011 Rmu_sc0007848.1_g000014 Rmu_sc0007899.1_g000003 Rmu_sc0007991.1_g000001 Rmu_sc0007991.1_g000019 Rmu_sc0008060.1_g000001 Rmu_sc0008105.1_g000005 Rmu_sc0008123.1_g000001 Rmu_sc0008148.1_g000066 Rmu_sc0008225.1_g000001 Rmu_sc0008284.1_g000003 Rmu_sc0008329.1_g000001 Rmu_sc0008411.1_g000002 Rmu_sc0008411.1_g000003 Rmu_sc0008416.1_g000001 Rmu_sc0008477.1_g000012 Rmu_sc0008532.1_g000003 Rmu_sc0008582.1_g000002 Rmu_sc0008775.1_g000004 Rmu_sc0008839.1_g000014 Rmu_sc0008922.1_g000007 Rmu_sc0009103.1_g000001 Rmu_sc0009227.1_g000005 Rmu_sc0009479.1_g000001 Rmu_sc0009555.1_g000009 Rmu_sc0009618.1_g000003 Rmu_sc0009644.1_g000007 Rmu_sc0009644.1_g000010 Rmu_sc0009747.1_g000002 Rmu_sc0009760.1_g000001 Rmu_sc0009806.1_g000010 Rmu_sc0009806.1_g000011 Rmu_sc0009819.1_g000001 Rmu_sc0009857.1_g000001 Rmu_sc0009880.1_g000010 Rmu_sc0009907.1_g000014 Rmu_sc0010160.1_g000002 Rmu_sc0010266.1_g000003 Rmu_sc0010292.1_g000002 Rmu_sc0010292.1_g000003 Rmu_sc0010300.1_g000001 Rmu_sc0010328.1_g000004 Rmu_sc0010347.1_g000001 Rmu_sc0010351.1_g000005 Rmu_sc0010461.1_g000003 Rmu_sc0010521.1_g000006 Rmu_sc0010554.1_g000006 Rmu_sc0010554.1_g000007 Rmu_sc0010606.1_g000006 Rmu_sc0010628.1_g000002 Rmu_sc0010640.1_g000010 Rmu_sc0010824.1_g000002 Rmu_sc0011028.1_g000017 Rmu_sc0011050.1_g000006 Rmu_sc0011115.1_g000009 Rmu_sc0011314.1_g000003 Rmu_sc0011406.1_g000001 Rmu_sc0011421.1_g000002 Rmu_sc0011662.1_g000002 Rmu_sc0011707.1_g000001 Rmu_sc0011720.1_g000001 Rmu_sc0012005.1_g000017 Rmu_sc0012006.1_g000002 Rmu_sc0012014.1_g000001 Rmu_sc0012140.1_g000010 Rmu_sc0012283.1_g000004 Rmu_sc0012283.1_g000005 Rmu_sc0012582.1_g000003 Rmu_sc0013013.1_g000001 Rmu_sc0013025.1_g000002 Rmu_sc0013205.1_g000004 Rmu_sc0013539.1_g000001 Rmu_sc0013688.1_g000001 Rmu_sc0013708.1_g000001 Rmu_sc0013859.1_g000001 Rmu_sc0013927.1_g000006 Rmu_sc0014441.1_g000001 Rmu_sc0014500.1_g000004 Rmu_sc0014637.1_g000001 Rmu_sc0014701.1_g000001 Rmu_sc0014782.1_g000010 Rmu_sc0014879.1_g000001 Rmu_sc0014906.1_g000001 Rmu_sc0014906.1_g000002 Rmu_sc0014987.1_g000003 Rmu_sc0017207.1_g000004 Rmu_sc0017446.1_g000001 Rmu_sc0017565.1_g000001 Rmu_sc0017853.1_g000001 Rmu_sc0017946.1_g000002 Rmu_sc0018443.1_g000001 Rmu_sc0019490.1_g000004 Rmu_sc0019761.1_g000001 Rmu_sc0020011.1_g000001 Rmu_sc0020028.1_g000001 Rmu_sc0020050.1_g000001 Rmu_sc0020198.1_g000001 Rmu_sc0020363.1_g000001 Rmu_sc0020525.1_g000001 Rmu_sc0020563.1_g000001 Rmu_sc0020901.1_g000001 Rmu_sc0021320.1_g000002 Rmu_sc0021640.1_g000001 Rmu_sc0021847.1_g000001 Rmu_sc0022221.1_g000005 Rmu_sc0022894.1_g000001 Rmu_sc0025777.1_g000001 Rmu_sc0027044.1_g000001 Rmu_sc0027150.1_g000001 Rmu_sc0027506.1_g000008 Rmu_sc0027628.1_g000001 Rmu_sc0027803.1_g000001 Rmu_sc0028353.1_g000001 Rmu_sc0030152.1_g000001 Rmu_sc0031284.1_g000001 Rmu_sc0031960.1_g000002 Rmu_sc0031983.1_g000001 Rmu_sc0032559.1_g000001 Rmu_sc0032809.1_g000001 Rmu_sc0033529.1_g000001 Rmu_sc0034118.1_g000003 Rmu_sc0034164.1_g000001 Rmu_sc0034184.1_g000001 Rmu_sc0035648.1_g000001 Rmu_sc0036402.1_g000002 Rmu_sc0037863.1_g000001 Rmu_sc0038281.1_g000001 Rmu_ssc0000044.1_g000007 Rmu_ssc0000047.1_g000018 Rmu_ssc0000087.1_g000060 Rmu_ssc0000114.1_g000007 Rmu_ssc0000134.1_g000026 Rmu_ssc0000187.1_g000019 Rmu_ssc0000200.1_g000014 Rmu_ssc0000215.1_g000017 Rmu_ssc0000218.1_g000028 Rmu_ssc0000233.1_g000064 Rmu_ssc0000233.1_g000068 Rmu_ssc0000238.1_g000029 Rmu_ssc0000259.1_g000004 Rmu_ssc0000300.1_g000005 Rmu_ssc0000322.1_g000014 Rmu_ssc0000339.1_g000025 Rmu_ssc0000377.1_g000027 Rmu_ssc0000377.1_g000034 Rmu_ssc0000410.1_g000025 Rmu_ssc0000442.1_g000034 Rmu_ssc0000443.1_g000021 Rmu_ssc0000443.1_g000028 Rmu_ssc0000467.1_g000041 Rmu_ssc0000476.1_g000007
rosa_roxburghii Rroxscaffold_1G00010900 Rroxscaffold_1G00029770 Rroxscaffold_3G00261700 Rroxscaffold_4G00310470 Rroxscaffold_6G00425670 Rroxscaffold_7G00195370
rosa_rugosa Rorug01G0084600 Rorug05G0348400
rosa_samantha Rh2DG490800 Rh5AG437500 Rh6DG142100
rosa_wichuraiana Rw1G004160 Rw1G004410 Rw1G010750 Rw1G012620 Rw1G014240 Rw1G028600 Rw2G022270 Rw2G025600 Rw4G002660 Rw4G005160 Rw4G010950 Rw5G011450 Rw5G022530 Rw5G024030 Rw5G024050 Rw5G029540 Rw5G038900 Rw5G047990 Rw6G004550 Rw6G015580 Rw7G016560 Rw7G040340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 738
AccB1I GGYRCC 1 cut(s) 197
AccB7I CCANNNNNTGG 1 cut(s) 774
AccII CGCG 2 cut(s) 99, 101
AccIII TCCGGA 1 cut(s) 162
AciI CCGC 2 cut(s) 97, 101
AclWI GGATC 6 cut(s) 61, 156, 160, 173, 436, 686
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 2 cut(s) 406, 1007
AcuI CTGAAG 2 cut(s) 221, 456
AcvI CACGTG 3 cut(s) 704, 722, 863
AcyI GRCGYC 2 cut(s) 177, 198
AdeI CACNNNGTG 1 cut(s) 722
AfaI GTAC 3 cut(s) 76, 233, 824
AfiI CCNNNNNNNGG 4 cut(s) 225, 316, 327, 774
AflII CTTAAG 2 cut(s) 272, 947
AflIII ACRYGT 2 cut(s) 381, 862
AgsI TTSAA 4 cut(s) 244, 373, 535, 820
AjiI CACGTC 2 cut(s) 401, 686
AjnI CCWGG 3 cut(s) 7, 192, 599
AleI CACNNNNGTG 1 cut(s) 1091
AluBI AGCT 2 cut(s) 541, 1031
AluI AGCT 2 cut(s) 541, 1031
Alw26I GTCTC 2 cut(s) 164, 562
AlwI GGATC 6 cut(s) 61, 156, 160, 173, 436, 686
Aor13HI TCCGGA 1 cut(s) 162
AoxI GGCC 8 cut(s) 10, 32, 102, 318, 602, 751, 760, 796
ApeKI GCWGC 4 cut(s) 4, 62, 65, 890
ApoI RAATTY 2 cut(s) 406, 1007
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
AspLEI GCGC 3 cut(s) 101, 200, 780
AspS9I GGNCC 4 cut(s) 103, 751, 761, 797
AsuHPI GGTGA 7 cut(s) 143, 203, 920, 932, 1016, 1078, 1091
AsuNHI GCTAGC 1 cut(s) 971
AxyI CCTNAGG 1 cut(s) 627
BaeGI GKGCMC 1 cut(s) 47
BamHI GGATCC 1 cut(s) 165
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 928
BbrPI CACGTG 3 cut(s) 704, 722, 863
BbsI GAAGAC 2 cut(s) 251, 455
BbvCI CCTCAGC 1 cut(s) 14
BbvI GCAGC 4 cut(s) 16, 49, 52, 877
BccI CCATC 3 cut(s) 99, 647, 779
BceAI ACGGC 3 cut(s) 164, 305, 738
BciT130I CCWGG 3 cut(s) 9, 194, 601
BclI TGATCA 2 cut(s) 543, 937
BcoDI GTCTC 2 cut(s) 164, 562
BfaI CTAG 4 cut(s) 485, 801, 902, 972
BfoI RGCGCY 1 cut(s) 201
BfrI CTTAAG 2 cut(s) 272, 947
BglI GCCNNNNNGGC 1 cut(s) 759
BisI GCNGC 5 cut(s) 5, 63, 66, 102, 891
BlsI GCNGC 5 cut(s) 6, 64, 67, 103, 892
BmcAI AGTACT 1 cut(s) 824
Bme1390I CCNGG 3 cut(s) 9, 194, 601
BmgBI CACGTC 2 cut(s) 401, 686
BmgT120I GGNCC 4 cut(s) 103, 751, 761, 797
BmiI GGNNCC 4 cut(s) 105, 167, 199, 834
BmrFI CCNGG 3 cut(s) 9, 194, 601
BmrI ACTGGG 1 cut(s) 41
BmsI GCATC 3 cut(s) 27, 256, 832
BmtI GCTAGC 1 cut(s) 975
BmuI ACTGGG 1 cut(s) 41
BpiI GAAGAC 2 cut(s) 251, 455
BpmI CTGGAG 2 cut(s) 9, 21
Bpu10I CCTNAGC 1 cut(s) 14
BsaAI YACGTR 3 cut(s) 704, 722, 863
BsaHI GRCGYC 2 cut(s) 177, 198
BsaJI CCNNGG 3 cut(s) 192, 193, 754
BsaWI WCCGGW 3 cut(s) 145, 162, 835
BsaXI ACNNNNNCTCC 2 cut(s) 116, 146
Bsc4I CCNNNNNNNGG 4 cut(s) 225, 316, 327, 774
Bse1I ACTGG 4 cut(s) 38, 47, 321, 493
Bse21I CCTNAGG 1 cut(s) 627
BseAI TCCGGA 1 cut(s) 162
BseBI CCWGG 3 cut(s) 9, 194, 601
BseDI CCNNGG 3 cut(s) 192, 193, 754
BseGI GGATG 4 cut(s) 18, 91, 271, 847
BseLI CCNNNNNNNGG 4 cut(s) 225, 316, 327, 774
BseMII CTCAG 4 cut(s) 28, 62, 555, 618
BseNI ACTGG 4 cut(s) 38, 47, 321, 493
BseSI GKGCMC 1 cut(s) 47
BseXI GCAGC 4 cut(s) 16, 49, 52, 877
BseYI CCCAGC 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 51
Bsh1236I CGCG 2 cut(s) 99, 101
BshFI GGCC 8 cut(s) 12, 34, 104, 320, 604, 753, 762, 798
BshNI GGYRCC 1 cut(s) 197
BsiSI CCGG 3 cut(s) 146, 163, 836
BslFI GGGAC 2 cut(s) 291, 744
BslI CCNNNNNNNGG 4 cut(s) 225, 316, 327, 774
BsmAI GTCTC 2 cut(s) 164, 562
BsmFI GGGAC 2 cut(s) 291, 744
BsmI GAATGC 1 cut(s) 812
BsnI GGCC 8 cut(s) 12, 34, 104, 320, 604, 753, 762, 798
Bsp1286I GDGCHC 2 cut(s) 47, 928
Bsp13I TCCGGA 1 cut(s) 162
Bsp143I GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
BspACI CCGC 2 cut(s) 97, 101
BspANI GGCC 8 cut(s) 12, 34, 104, 320, 604, 753, 762, 798
BspCNI CTCAG 4 cut(s) 27, 63, 556, 619
BspEI TCCGGA 1 cut(s) 162
BspFNI CGCG 2 cut(s) 99, 101
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 4 cut(s) 105, 167, 199, 834
BspOI GCTAGC 1 cut(s) 975
BspPI GGATC 6 cut(s) 61, 156, 160, 173, 436, 686
BspT107I GGYRCC 1 cut(s) 197
BspTI CTTAAG 2 cut(s) 272, 947
BsrI ACTGG 4 cut(s) 38, 47, 321, 493
BssECI CCNNGG 3 cut(s) 192, 193, 754
BssMI GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
BssNI GRCGYC 2 cut(s) 177, 198
Bst2UI CCWGG 3 cut(s) 9, 194, 601
Bst4CI ACNGT 5 cut(s) 261, 1004, 1037, 1079, 1090
BstACI GRCGYC 2 cut(s) 177, 198
BstAFI CTTAAG 2 cut(s) 272, 947
BstBAI YACGTR 3 cut(s) 704, 722, 863
BstC8I GCNNGC 3 cut(s) 60, 796, 973
BstDEI CTNAG 5 cut(s) 14, 71, 564, 627, 1043
BstDSI CCRYGG 1 cut(s) 754
BstF5I GGATG 4 cut(s) 18, 91, 271, 847
BstFNI CGCG 2 cut(s) 99, 101
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 3 cut(s) 101, 200, 780
BstKTI GATC 7 cut(s) 56, 151, 168, 444, 546, 694, 940
BstMAI GTCTC 2 cut(s) 164, 562
BstMBI GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
BstMWI GCNNNNNNNGC 3 cut(s) 107, 116, 759
BstNI CCWGG 3 cut(s) 9, 194, 601
BstNSI RCATGY 1 cut(s) 385
BstSCI CCNGG 3 cut(s) 7, 192, 599
BstSLI GKGCMC 1 cut(s) 47
BstUI CGCG 2 cut(s) 99, 101
BstV1I GCAGC 4 cut(s) 16, 49, 52, 877
BstV2I GAAGAC 2 cut(s) 251, 455
BstX2I RGATCY 1 cut(s) 165
BstYI RGATCY 1 cut(s) 165
Bsu36I CCTNAGG 1 cut(s) 627
BsuRI GGCC 8 cut(s) 12, 34, 104, 320, 604, 753, 762, 798
BtgI CCRYGG 1 cut(s) 754
BtrI CACGTC 2 cut(s) 401, 686
BtsCI GGATG 4 cut(s) 18, 91, 271, 847
BtsI GCAGTG 2 cut(s) 135, 853
BtsIMutI CAGTG 6 cut(s) 45, 68, 135, 332, 853, 1033
Cac8I GCNNGC 3 cut(s) 60, 796, 973
CciI TCATGA 1 cut(s) 295
CfoI GCGC 3 cut(s) 101, 200, 780
Cfr13I GGNCC 4 cut(s) 103, 751, 761, 797
CseI GACGC 1 cut(s) 185
Csp6I GTAC 3 cut(s) 75, 232, 823
CviAII CATG 3 cut(s) 296, 382, 734
CviQI GTAC 3 cut(s) 75, 232, 823
DdeI CTNAG 5 cut(s) 14, 71, 564, 627, 1043
DinI GGCGCC 1 cut(s) 199
DpnI GATC 7 cut(s) 55, 150, 167, 443, 545, 693, 939
DpnII GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
DraIII CACNNNGTG 1 cut(s) 722
DrdI GACNNNNNNGTC 1 cut(s) 738
DseDI GACNNNNNNGTC 1 cut(s) 738
EaeI YGGCCR 1 cut(s) 318
Eco147I AGGCCT 2 cut(s) 34, 604
Eco24I GRGCYC 1 cut(s) 928
Eco57I CTGAAG 2 cut(s) 221, 456
Eco72I CACGTG 3 cut(s) 704, 722, 863
Eco81I CCTNAGG 1 cut(s) 627
EcoO109I RGGNCCY 1 cut(s) 761
EcoRII CCWGG 3 cut(s) 7, 192, 599
EcoT38I GRGCYC 1 cut(s) 928
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
FaeI CATG 3 cut(s) 299, 385, 737
FaqI GGGAC 2 cut(s) 291, 744
FatI CATG 3 cut(s) 295, 381, 733
FauI CCCGC 1 cut(s) 104
FbaI TGATCA 2 cut(s) 543, 937
Fnu4HI GCNGC 5 cut(s) 5, 63, 66, 102, 891
FokI GGATG 4 cut(s) 5, 78, 278, 854
FriOI GRGCYC 1 cut(s) 928
Fsp4HI GCNGC 5 cut(s) 5, 63, 66, 102, 891
FspBI CTAG 4 cut(s) 485, 801, 902, 972
GlaI GCGC 3 cut(s) 100, 199, 779
GluI GCNGC 5 cut(s) 5, 63, 66, 102, 891
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 2 cut(s) 9, 21
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 8 cut(s) 12, 34, 104, 320, 604, 753, 762, 798
HapII CCGG 3 cut(s) 146, 163, 836
HgaI GACGC 1 cut(s) 185
HhaI GCGC 3 cut(s) 101, 200, 780
Hin1I GRCGYC 2 cut(s) 177, 198
Hin1II CATG 3 cut(s) 299, 385, 737
Hin6I GCGC 3 cut(s) 99, 198, 778
HinP1I GCGC 3 cut(s) 99, 198, 778
HinfI GANTC 3 cut(s) 336, 451, 522
HpaII CCGG 3 cut(s) 146, 163, 836
HphI GGTGA 7 cut(s) 143, 203, 920, 932, 1016, 1078, 1091
Hpy166II GTNNAC 1 cut(s) 879
Hpy188I TCNGA 3 cut(s) 53, 997, 1072
Hpy188III TCNNGA 6 cut(s) 26, 163, 296, 445, 626, 743
Hpy8I GTNNAC 1 cut(s) 879
Hpy99I CGWCG 3 cut(s) 179, 185, 1004
HpyAV CCTTC 2 cut(s) 245, 541
HpyCH4III ACNGT 5 cut(s) 261, 1004, 1037, 1079, 1090
HpyCH4IV ACGT 6 cut(s) 400, 685, 703, 721, 862, 916
HpyCH4V TGCA 8 cut(s) 4, 68, 110, 556, 671, 716, 810, 893
HpyF10VI GCNNNNNNNGC 3 cut(s) 107, 116, 759
HpyF3I CTNAG 5 cut(s) 14, 71, 564, 627, 1043
HpySE526I ACGT 6 cut(s) 400, 685, 703, 721, 862, 916
Hsp92I GRCGYC 2 cut(s) 177, 198
Hsp92II CATG 3 cut(s) 299, 385, 737
HspAI GCGC 3 cut(s) 99, 198, 778
KasI GGCGCC 1 cut(s) 197
Kpn2I TCCGGA 1 cut(s) 162
Ksp22I TGATCA 2 cut(s) 543, 937
Kzo9I GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
LmnI GCTCC 1 cut(s) 312
Lsp1109I GCAGC 4 cut(s) 16, 49, 52, 877
LweI GCATC 3 cut(s) 27, 256, 832
MaeI CTAG 4 cut(s) 485, 801, 902, 972
MaeII ACGT 6 cut(s) 400, 685, 703, 721, 862, 916
MalI GATC 7 cut(s) 55, 150, 167, 443, 545, 693, 939
MboI GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
MboII GAAGA 3 cut(s) 256, 443, 460
MflI RGATCY 1 cut(s) 165
MhlI GDGCHC 2 cut(s) 47, 928
MluCI AATT 4 cut(s) 406, 477, 634, 1007
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 1 cut(s) 445
MmeI TCCRAC 4 cut(s) 31, 483, 589, 661
MroI TCCGGA 1 cut(s) 162
MseI TTAA 5 cut(s) 273, 587, 920, 948, 1062
MslI CAYNNNNRTG 1 cut(s) 1091
MspCI CTTAAG 2 cut(s) 272, 947
MspI CCGG 3 cut(s) 146, 163, 836
MspR9I CCNGG 3 cut(s) 9, 194, 601
Mva1269I GAATGC 1 cut(s) 812
MvaI CCWGG 3 cut(s) 9, 194, 601
MvnI CGCG 2 cut(s) 99, 101
MwoI GCNNNNNNNGC 3 cut(s) 107, 116, 759
NarI GGCGCC 1 cut(s) 198
NdeII GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
NheI GCTAGC 1 cut(s) 971
NlaIII CATG 3 cut(s) 299, 385, 737
NlaIV GGNNCC 4 cut(s) 105, 167, 199, 834
NspI RCATGY 1 cut(s) 385
OliI CACNNNNGTG 1 cut(s) 1091
PagI TCATGA 1 cut(s) 295
PasI CCCWGGG 1 cut(s) 193
PceI AGGCCT 2 cut(s) 34, 604
PciI ACATGT 1 cut(s) 381
PctI GAATGC 1 cut(s) 812
PfeI GAWTC 2 cut(s) 336, 522
PflFI GACNNNGTC 1 cut(s) 179
PflMI CCANNNNNTGG 1 cut(s) 774
PkrI GCNGC 5 cut(s) 6, 64, 67, 103, 892
PleI GAGTC 1 cut(s) 445
PluTI GGCGCC 1 cut(s) 201
PmaCI CACGTG 3 cut(s) 704, 722, 863
PmlI CACGTG 3 cut(s) 704, 722, 863
PpsI GAGTC 1 cut(s) 445
Ppu21I YACGTR 3 cut(s) 704, 722, 863
PscI ACATGT 1 cut(s) 381
Psp6I CCWGG 3 cut(s) 7, 192, 599
PspCI CACGTG 3 cut(s) 704, 722, 863
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 3 cut(s) 7, 192, 599
PspN4I GGNNCC 4 cut(s) 105, 167, 199, 834
PspPI GGNCC 4 cut(s) 103, 751, 761, 797
PsuI RGATCY 1 cut(s) 165
PsyI GACNNNGTC 1 cut(s) 179
RsaI GTAC 3 cut(s) 76, 233, 824
RsaNI GTAC 3 cut(s) 75, 232, 823
RseI CAYNNNNRTG 1 cut(s) 1091
SaqAI TTAA 5 cut(s) 273, 587, 920, 948, 1062
SatI GCNGC 5 cut(s) 5, 63, 66, 102, 891
Sau3AI GATC 7 cut(s) 53, 148, 165, 441, 543, 691, 937
Sau96I GGNCC 4 cut(s) 103, 751, 761, 797
ScaI AGTACT 1 cut(s) 824
SchI GAGTC 1 cut(s) 445
ScrFI CCNGG 3 cut(s) 9, 194, 601
SduI GDGCHC 2 cut(s) 47, 928
SfaNI GCATC 3 cut(s) 27, 256, 832
SfiI GGCCNNNNNGGCC 1 cut(s) 759
SfoI GGCGCC 1 cut(s) 199
SmiMI CAYNNNNRTG 1 cut(s) 1091
SmlI CTYRAG 2 cut(s) 272, 947
SmoI CTYRAG 2 cut(s) 272, 947
Sse9I AATT 4 cut(s) 406, 477, 634, 1007
SseBI AGGCCT 2 cut(s) 34, 604
SsiI CCGC 2 cut(s) 97, 101
SspDI GGCGCC 1 cut(s) 197
SspMI CTAG 4 cut(s) 485, 801, 902, 972
StuI AGGCCT 2 cut(s) 34, 604
StyD4I CCNGG 3 cut(s) 7, 192, 599
TaaI ACNGT 5 cut(s) 261, 1004, 1037, 1079, 1090
TaiI ACGT 6 cut(s) 403, 688, 706, 724, 865, 919
TaqI TCGA 1 cut(s) 183
TasI AATT 4 cut(s) 406, 477, 634, 1007
TatI WGTACW 1 cut(s) 822
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 2 cut(s) 336, 522
Tru1I TTAA 5 cut(s) 273, 587, 920, 948, 1062
Tru9I TTAA 5 cut(s) 273, 587, 920, 948, 1062
TscAI CASTG 6 cut(s) 45, 75, 142, 332, 860, 1040
TseI GCWGC 4 cut(s) 4, 62, 65, 890
TspDTI ATGAA 1 cut(s) 284
TspRI CASTG 6 cut(s) 45, 75, 142, 332, 860, 1040
Tth111I GACNNNGTC 1 cut(s) 179
Van91I CCANNNNNTGG 1 cut(s) 774
Vha464I CTTAAG 2 cut(s) 272, 947
XapI RAATTY 2 cut(s) 406, 1007
XceI RCATGY 1 cut(s) 385
XcmI CCANNNNNNNNNTGG 1 cut(s) 1034
XspI CTAG 4 cut(s) 485, 801, 902, 972
ZrmI AGTACT 1 cut(s) 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.