pycom01g04150

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000158
Physical Location & Seq
Forward (+)
3145937 .. 3149025
3089 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g04150.13

Sequence Viewer

Length: 2178 bp
ATGTATCTAATCACAATCATATACACTGCAATCTCTATCATCAACATCTACTCACCTGGAACTTACCTGAGCATCTGCAGCGTGATGCATTTGACATGGCATTTAAAACGTAGATCGATCTGTAACAGTTTCTGGGAAAATGTAAAGCGTATATACATATATATATATATATATATATATATATATATATATATATATATATATATAACCAAAAGCCCACTCACTTGGATTCCACGCTACAACTCCCTAGCACACACATCGAGGCGTCACAAACGATCGGTTCCTAGAACAATTATCAAATCATGTCTCAGAAATCTTATCGAAAGAACACTCAACCGTCGGTCAAAGGTCGATGGTAGGATCCATAACCCTACATACCTCGATTCGGAAGATCCGCACATCGGATTTCCGATCTGTTATTTCCAAAGATCCACATTATGCTTCTATAGTAACATACTAAAATCTTACTACAATCCGACGATCGATCTCTGCCAATTACAAATTCAAGTGGAGGTTAACGTTTTATTTTACGAACTTACAAATTTAATTCGGAAAAGTCCGTATGTTGGATTCTCAATCCGTAAGTTCCTATGGTTCTCAAATATTACGTACTATAATATATTAAAGTTTGGTGACAATCCAACGGTTGGATCGTCAATTCATATAACGAACCCGGGTTTGGATTTTTTATTTTTTTTTCCTTCTTCCTCCTCACGAAAACCTCAGTGCTACAAAGACCCACATGAAGCGAGAAATGTAGGAAACACAATCATCCTAAGTTGGAGCCGAGATAAGATCGATGTTGGCCGGAAAAATGTTCTAGTTCGATACTTAACCATTTTTAGTGTTCTACCTATGTATTTAAAGTTCGTAATGAGGCAAACAGAATCATACCAAAATCATAGCTCAATAGAGGTCGTAGATGGTCGGAAAAGGGGTCTGAAAGTGGATCTCCGATGTTCCTGTGTTCCCAGCTTCACCAAGGCGACACTTAGGTTAAATATGACTAGATCAAGCTATAACAAAGAAAAGTTTGAAGAGAAGTACTGTGTAGTTCCATTTGGGTGTCCTGAGTGGTCTGAGGAAGAGCCAACGAAGATGATCGATCATGTTGGGTGGTCCTCGGCATGGTTTGTACAGATTAGAAGAGAGAGAGAAAAAGTGTTTGAAAATAAGAAAAATAATGGGAGAGAAAGAGACCGAAATCTCTGGAAGGTGAGGGTATGGAACAGAAAAATATTCTTCCATAAAATCTTCATCGTAACTCCAAATTTGATTCCACTTGCGCCTACGCGTTCTCCCACTATAATCTGGTCAACAAAAGTCAATACCCTTACTTTTAGGGCATTTTCGTCAATTCTCTCAATTAAAATAAATAGAAACGTAAATTTAGGAACTGTGATCCTTATATGTATATTCCCATCCCTACCTAGCACGAGGCCTTTGGGGAGCTCATTGGCTTCGGGTTCCATGGGAACTCTGAAGTTAAGTGAATATTCCCAAAAACAAAACCGTGAGGGAATGGTAAGCCCAAAGCGGACAATATCGTGCTATGGTGACAATTTGGTATCAGAGCCTAACCCTGGTCGCGTGTGTGCCGACGAGGACATCGGGCCCCTAAGGGGGGTGGATTGTGACATCCCACATCGCCCAGGGGATTTGGTGTGGGATCGATCCTTATATGTATATTCCCATCCCTATCTAGCACGAGGCCTTTTGGGAGCTCATTGGCTTCGGAACAATCTCATGATGGGTGACCCACTAGGAAGTTCCCAAAGCGGACAATATCGTGCTACGGTGATGGAGCGGGCCCGGGAAGTGGTCCCCCCTAGCACGATATTGTCCGTTTTGGGCTTACCATTCCCTCACGGTTTTGTTTTTGGGAACTCACGAGCAACTTCCCAGTGGGTCACCCATTATGGGATTGCTCTAGCCCCCCTTTTCCTCCCAAAAGGCCTCGTGCTAGATAAGGATGAGAATATACATATAAGGATCACTCTCCTGGGCGATGTGGGATGTCACACATATGTTATTCTATATAAATTTAAAATTTTAAGTTTATTTATTTATTTATTTTTATATAATTTAAAAATAAAAATATCAAGTGAATTAAAAATACCGAACACATTTGAACGGTTTACAATGTGGAAAGCCTTACTGAAAACATCGTCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

726

Amino Acids

84.16

Weight (kDa)

9.72

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 647
AccBSI CCGCTC 1 cut(s) 1807
AccII CGCG 2 cut(s) 1294, 1590
AciI CCGC 4 cut(s) 395, 1537, 1779, 1807
AclI AACGTT 1 cut(s) 519
AcoI YGGCCR 1 cut(s) 805
AcsI RAATTY 6 cut(s) 501, 541, 1270, 1387, 2042, 2049
AcuI CTGAAG 1 cut(s) 1502
AcyI GRCGYC 1 cut(s) 265
AfaI GTAC 3 cut(s) 611, 1046, 1137
AflIII ACRYGT 1 cut(s) 1292
AgsI TTSAA 4 cut(s) 506, 1037, 1169, 2132
AjnI CCWGG 4 cut(s) 55, 1582, 1651, 2001
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 662, 694
AluBI AGCT 5 cut(s) 906, 975, 1017, 1452, 1724
AluI AGCT 5 cut(s) 906, 975, 1017, 1452, 1724
Alw21I GWGCWC 2 cut(s) 1454, 1726
Alw26I GTCTC 2 cut(s) 311, 1191
AlwNI CAGNNNCTG 1 cut(s) 132
Ama87I CYCGRG 2 cut(s) 673, 1812
AoxI GGCC 6 cut(s) 805, 1439, 1613, 1711, 1809, 1954
ApaI GGGCCC 2 cut(s) 1617, 1813
ApeKI GCWGC 1 cut(s) 78
ApoI RAATTY 6 cut(s) 501, 541, 1270, 1387, 2042, 2049
AspLEI GCGC 1 cut(s) 1288
AspS9I GGNCC 6 cut(s) 1119, 1613, 1614, 1809, 1810, 1822
AsuC2I CCSGG 4 cut(s) 674, 675, 1813, 1814
AsuHPI GGTGA 8 cut(s) 45, 644, 970, 1228, 1568, 1766, 1810, 1903
AvaI CYCGRG 2 cut(s) 673, 1812
AvaII GGWCC 2 cut(s) 1119, 1822
AxyI CCTNAGG 1 cut(s) 1619
BaeGI GKGCMC 2 cut(s) 1617, 1813
BamHI GGATCC 1 cut(s) 360
BanII GRGCYC 4 cut(s) 1454, 1617, 1726, 1813
BauI CACGAG 4 cut(s) 1435, 1707, 1890, 1958
Bbv12I GWGCWC 2 cut(s) 1454, 1726
BbvI GCAGC 1 cut(s) 90
BccI CCATC 6 cut(s) 347, 917, 1429, 1701, 1744, 1795
BcgI CGANNNNNNTGC 2 cut(s) 240, 274
BciT130I CCWGG 4 cut(s) 57, 1584, 1653, 2003
BcnI CCSGG 4 cut(s) 674, 675, 1813, 1814
BcoDI GTCTC 2 cut(s) 311, 1191
BfmI CTRYAG 2 cut(s) 76, 445
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
BmcAI AGTACT 1 cut(s) 1046
Bme1390I CCNGG 8 cut(s) 57, 674, 675, 1584, 1653, 1813, 1814, 2003
Bme18I GGWCC 2 cut(s) 1119, 1822
BmeT110I CYCGRG 2 cut(s) 673, 1812
BmgT120I GGNCC 6 cut(s) 1119, 1613, 1614, 1809, 1810, 1822
BmiI GGNNCC 8 cut(s) 282, 362, 785, 1468, 1615, 1616, 1811, 1824
BmrFI CCNGG 8 cut(s) 57, 674, 675, 1584, 1653, 1813, 1814, 2003
BmrI ACTGGG 1 cut(s) 1897
BmsI GCATC 2 cut(s) 75, 81
BmuI ACTGGG 1 cut(s) 1897
Bpu10I CCTNAGC 1 cut(s) 68
BpuMI CCSGG 4 cut(s) 674, 675, 1813, 1814
Bsa29I ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
BsaAI YACGTR 1 cut(s) 609
BsaHI GRCGYC 1 cut(s) 265
BsaI GGTCTC 1 cut(s) 1191
BsaJI CCNNGG 9 cut(s) 673, 981, 1122, 1470, 1582, 1651, 1652, 1812, 2002
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bse1I ACTGG 1 cut(s) 1903
Bse21I CCTNAGG 1 cut(s) 1619
BseBI CCWGG 4 cut(s) 57, 1584, 1653, 2003
BseCI ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
BseDI CCNNGG 9 cut(s) 673, 981, 1122, 1470, 1582, 1651, 1652, 1812, 2002
BseGI GGATG 6 cut(s) 771, 1421, 1638, 1693, 1978, 2021
BseMII CTCAG 5 cut(s) 59, 322, 737, 1062, 1071
BseNI ACTGG 1 cut(s) 1903
BseRI GAGGAG 1 cut(s) 700
BseSI GKGCMC 2 cut(s) 1617, 1813
BseXI GCAGC 1 cut(s) 90
BseYI CCCAGC 1 cut(s) 971
Bsh1236I CGCG 2 cut(s) 1294, 1590
Bsh1285I CGRYCG 2 cut(s) 278, 483
BshFI GGCC 6 cut(s) 807, 1441, 1615, 1713, 1811, 1956
BshVI ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
BsiEI CGRYCG 2 cut(s) 278, 483
BsiHKAI GWGCWC 2 cut(s) 1454, 1726
BsiHKCI CYCGRG 2 cut(s) 673, 1812
BsiSI CCGG 3 cut(s) 674, 808, 1813
BslFI GGGAC 1 cut(s) 1808
BsmAI GTCTC 2 cut(s) 311, 1191
BsmFI GGGAC 1 cut(s) 1808
BsnI GGCC 6 cut(s) 807, 1441, 1615, 1713, 1811, 1956
Bso31I GGTCTC 1 cut(s) 1191
BsoBI CYCGRG 2 cut(s) 673, 1812
Bsp120I GGGCCC 2 cut(s) 1613, 1809
Bsp1286I GDGCHC 4 cut(s) 1454, 1617, 1726, 1813
Bsp1407I TGTACA 1 cut(s) 1135
Bsp19I CCATGG 1 cut(s) 1470
BspACI CCGC 4 cut(s) 395, 1537, 1779, 1807
BspANI GGCC 6 cut(s) 807, 1441, 1615, 1713, 1811, 1956
BspCNI CTCAG 5 cut(s) 60, 321, 736, 1063, 1072
BspDI ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
BspFNI CGCG 2 cut(s) 1294, 1590
BspHI TCATGA 1 cut(s) 1746
BspLI GGNNCC 8 cut(s) 282, 362, 785, 1468, 1615, 1616, 1811, 1824
BspMAI CTGCAG 1 cut(s) 80
BspQI GCTCTTC 1 cut(s) 1080
BspTNI GGTCTC 1 cut(s) 1191
BsrBI CCGCTC 1 cut(s) 1807
BsrGI TGTACA 1 cut(s) 1135
BsrI ACTGG 1 cut(s) 1903
BssECI CCNNGG 9 cut(s) 673, 981, 1122, 1470, 1582, 1651, 1652, 1812, 2002
BssNI GRCGYC 1 cut(s) 265
BssSI CACGAG 4 cut(s) 1435, 1707, 1890, 1958
BssT1I CCWWGG 2 cut(s) 981, 1470
Bst2BI CACGAG 4 cut(s) 1435, 1707, 1890, 1958
Bst2UI CCWGG 4 cut(s) 57, 1584, 1653, 2003
Bst4CI ACNGT 9 cut(s) 128, 338, 646, 1049, 1399, 1514, 1798, 1871, 2136
Bst6I CTCTTC 3 cut(s) 1032, 1080, 1141
BstACI GRCGYC 1 cut(s) 265
BstAUI TGTACA 1 cut(s) 1135
BstBAI YACGTR 1 cut(s) 609
BstC8I GCNNGC 1 cut(s) 1809
BstDEI CTNAG 8 cut(s) 68, 308, 723, 776, 992, 1071, 1080, 1619
BstDSI CCRYGG 1 cut(s) 1470
BstEII GGTNACC 2 cut(s) 1754, 1909
BstF5I GGATG 6 cut(s) 771, 1421, 1638, 1693, 1978, 2021
BstFNI CGCG 2 cut(s) 1294, 1590
BstHHI GCGC 1 cut(s) 1288
BstMAI GTCTC 2 cut(s) 311, 1191
BstMCI CGRYCG 2 cut(s) 278, 483
BstMWI GCNNNNNNNGC 1 cut(s) 78
BstNI CCWGG 4 cut(s) 57, 1584, 1653, 2003
BstPI GGTNACC 2 cut(s) 1754, 1909
BstSCI CCNGG 8 cut(s) 55, 672, 673, 1582, 1651, 1811, 1812, 2001
BstSFI CTRYAG 2 cut(s) 76, 445
BstSLI GKGCMC 2 cut(s) 1617, 1813
BstSNI TACGTA 1 cut(s) 609
BstUI CGCG 2 cut(s) 1294, 1590
BstV1I GCAGC 1 cut(s) 90
BstX2I RGATCY 4 cut(s) 360, 391, 428, 949
BstXI CCANNNNNNTGG 1 cut(s) 225
BstYI RGATCY 4 cut(s) 360, 391, 428, 949
Bsu15I ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
Bsu36I CCTNAGG 1 cut(s) 1619
BsuRI GGCC 6 cut(s) 807, 1441, 1615, 1713, 1811, 1956
BsuTUI ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
BtgI CCRYGG 1 cut(s) 1470
BtgZI GCGATG 2 cut(s) 1631, 2022
BtsCI GGATG 6 cut(s) 771, 1421, 1638, 1693, 1978, 2021
BtsI GCAGTG 1 cut(s) 24
BtsIMutI CAGTG 3 cut(s) 24, 731, 1910
Cac8I GCNNGC 1 cut(s) 1809
CaiI CAGNNNCTG 1 cut(s) 132
CciI TCATGA 1 cut(s) 1746
CfoI GCGC 1 cut(s) 1288
Cfr13I GGNCC 6 cut(s) 1119, 1613, 1614, 1809, 1810, 1822
Cfr9I CCCGGG 2 cut(s) 673, 1812
ClaI ATCGAT 5 cut(s) 116, 483, 798, 1104, 1672
CseI GACGC 1 cut(s) 254
Csp6I GTAC 3 cut(s) 610, 1045, 1136
CviAII CATG 7 cut(s) 96, 303, 743, 1109, 1128, 1471, 1747
CviQI GTAC 3 cut(s) 610, 1045, 1136
DdeI CTNAG 8 cut(s) 68, 308, 723, 776, 992, 1071, 1080, 1619
DraI TTTAAA 4 cut(s) 105, 864, 2047, 2088
EaeI YGGCCR 1 cut(s) 805
Eam1104I CTCTTC 3 cut(s) 1032, 1080, 1141
EarI CTCTTC 3 cut(s) 1032, 1080, 1141
Ecl136II GAGCTC 2 cut(s) 1452, 1724
Eco105I TACGTA 1 cut(s) 609
Eco130I CCWWGG 2 cut(s) 981, 1470
Eco147I AGGCCT 3 cut(s) 1441, 1713, 1956
Eco24I GRGCYC 4 cut(s) 1454, 1617, 1726, 1813
Eco31I GGTCTC 1 cut(s) 1191
Eco47I GGWCC 2 cut(s) 1119, 1822
Eco53kI GAGCTC 2 cut(s) 1452, 1724
Eco57I CTGAAG 1 cut(s) 1502
Eco81I CCTNAGG 1 cut(s) 1619
Eco88I CYCGRG 2 cut(s) 673, 1812
Eco91I GGTNACC 2 cut(s) 1754, 1909
EcoICRI GAGCTC 2 cut(s) 1452, 1724
EcoO109I RGGNCCY 1 cut(s) 1614
EcoO65I GGTNACC 2 cut(s) 1754, 1909
EcoRII CCWGG 4 cut(s) 55, 1582, 1651, 2001
EcoT14I CCWWGG 2 cut(s) 981, 1470
EcoT22I ATGCAT 1 cut(s) 90
EcoT38I GRGCYC 4 cut(s) 1454, 1617, 1726, 1813
ErhI CCWWGG 2 cut(s) 981, 1470
FaeI CATG 7 cut(s) 99, 306, 746, 1112, 1131, 1474, 1750
FaqI GGGAC 1 cut(s) 1808
FatI CATG 7 cut(s) 95, 302, 742, 1108, 1127, 1470, 1746
FauI CCCGC 1 cut(s) 1800
FauNDI CATATG 1 cut(s) 2026
Fnu4HI GCNGC 1 cut(s) 79
FokI GGATG 6 cut(s) 758, 1408, 1625, 1680, 1985, 2028
FriOI GRGCYC 4 cut(s) 1454, 1617, 1726, 1813
Fsp4HI GCNGC 1 cut(s) 79
GlaI GCGC 1 cut(s) 1287
GluI GCNGC 1 cut(s) 79
GsaI CCCAGC 1 cut(s) 975
HaeIII GGCC 6 cut(s) 807, 1441, 1615, 1713, 1811, 1956
HapII CCGG 3 cut(s) 674, 808, 1813
HgaI GACGC 1 cut(s) 254
HhaI GCGC 1 cut(s) 1288
Hin1I GRCGYC 1 cut(s) 265
Hin1II CATG 7 cut(s) 99, 306, 746, 1112, 1131, 1474, 1750
Hin6I GCGC 1 cut(s) 1286
HinP1I GCGC 1 cut(s) 1286
HincII GTYRAC 2 cut(s) 517, 1317
HindII GTYRAC 2 cut(s) 517, 1317
HinfI GANTC 5 cut(s) 229, 383, 570, 887, 1276
HpaI GTTAAC 1 cut(s) 517
HpaII CCGG 3 cut(s) 674, 808, 1813
HphI GGTGA 8 cut(s) 45, 644, 970, 1228, 1568, 1766, 1810, 1903
Hpy166II GTNNAC 3 cut(s) 517, 1317, 2139
Hpy188III TCNNGA 5 cut(s) 714, 1070, 1210, 1747, 1890
Hpy8I GTNNAC 3 cut(s) 517, 1317, 2139
Hpy99I CGWCG 3 cut(s) 342, 481, 1604
HpyAV CCTTC 2 cut(s) 711, 1207
HpyCH4III ACNGT 9 cut(s) 128, 338, 646, 1049, 1399, 1514, 1798, 1871, 2136
HpyCH4IV ACGT 4 cut(s) 109, 519, 608, 1383
HpyCH4V TGCA 3 cut(s) 29, 78, 88
HpyF10VI GCNNNNNNNGC 1 cut(s) 78
HpyF3I CTNAG 8 cut(s) 68, 308, 723, 776, 992, 1071, 1080, 1619
HpySE526I ACGT 4 cut(s) 109, 519, 608, 1383
Hsp92I GRCGYC 1 cut(s) 265
Hsp92II CATG 7 cut(s) 99, 306, 746, 1112, 1131, 1474, 1750
HspAI GCGC 1 cut(s) 1286
KspAI GTTAAC 1 cut(s) 517
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 4 cut(s) 783, 1449, 1721, 1804
Lsp1109I GCAGC 1 cut(s) 90
LweI GCATC 2 cut(s) 75, 81
MaeII ACGT 4 cut(s) 109, 519, 608, 1383
MbiI CCGCTC 1 cut(s) 1807
MboII GAAGA 8 cut(s) 401, 696, 1049, 1097, 1108, 1158, 1234, 1246
MflI RGATCY 4 cut(s) 360, 391, 428, 949
MhlI GDGCHC 4 cut(s) 1454, 1617, 1726, 1813
MluI ACGCGT 1 cut(s) 1292
MmeI TCCRAC 6 cut(s) 500, 547, 628, 665, 761, 908
Mph1103I ATGCAT 1 cut(s) 90
MslI CAYNNNNRTG 2 cut(s) 1063, 2025
MspI CCGG 3 cut(s) 674, 808, 1813
MspR9I CCNGG 8 cut(s) 57, 674, 675, 1584, 1653, 1813, 1814, 2003
MvaI CCWGG 4 cut(s) 57, 1584, 1653, 2003
MvnI CGCG 2 cut(s) 1294, 1590
MwoI GCNNNNNNNGC 1 cut(s) 78
NciI CCSGG 4 cut(s) 674, 675, 1813, 1814
NcoI CCATGG 1 cut(s) 1470
NdeI CATATG 1 cut(s) 2026
NlaIII CATG 7 cut(s) 99, 306, 746, 1112, 1131, 1474, 1750
NlaIV GGNNCC 8 cut(s) 282, 362, 785, 1468, 1615, 1616, 1811, 1824
NmeAIII GCCGAG 2 cut(s) 812, 1103
NmuCI GTSAC 7 cut(s) 266, 632, 1556, 1634, 1754, 1909, 2018
NsiI ATGCAT 1 cut(s) 90
PagI TCATGA 1 cut(s) 1746
PasI CCCWGGG 1 cut(s) 1652
PceI AGGCCT 3 cut(s) 1441, 1713, 1956
PciSI GCTCTTC 1 cut(s) 1080
PcsI WCGNNNNNNNCGW 1 cut(s) 650
PfeI GAWTC 5 cut(s) 229, 383, 570, 887, 1276
PflMI CCANNNNNTGG 1 cut(s) 647
PkrI GCNGC 1 cut(s) 80
Ple19I CGATCG 2 cut(s) 278, 483
Ppu21I YACGTR 1 cut(s) 609
Psp124BI GAGCTC 2 cut(s) 1454, 1726
Psp1406I AACGTT 1 cut(s) 519
Psp6I CCWGG 4 cut(s) 55, 1582, 1651, 2001
PspEI GGTNACC 2 cut(s) 1754, 1909
PspFI CCCAGC 1 cut(s) 971
PspGI CCWGG 4 cut(s) 55, 1582, 1651, 2001
PspN4I GGNNCC 8 cut(s) 282, 362, 785, 1468, 1615, 1616, 1811, 1824
PspOMI GGGCCC 2 cut(s) 1613, 1809
PspPI GGNCC 6 cut(s) 1119, 1613, 1614, 1809, 1810, 1822
PsrI GAACNNNNNNTAC 2 cut(s) 851, 883
PstI CTGCAG 1 cut(s) 80
PstNI CAGNNNCTG 1 cut(s) 132
PsuI RGATCY 4 cut(s) 360, 391, 428, 949
PvuI CGATCG 2 cut(s) 278, 483
RsaI GTAC 3 cut(s) 611, 1046, 1137
RsaNI GTAC 3 cut(s) 610, 1045, 1136
RseI CAYNNNNRTG 2 cut(s) 1063, 2025
SacI GAGCTC 2 cut(s) 1454, 1726
SapI GCTCTTC 1 cut(s) 1080
SatI GCNGC 1 cut(s) 79
Sau96I GGNCC 6 cut(s) 1119, 1613, 1614, 1809, 1810, 1822
ScaI AGTACT 1 cut(s) 1046
ScrFI CCNGG 8 cut(s) 57, 674, 675, 1584, 1653, 1813, 1814, 2003
SduI GDGCHC 4 cut(s) 1454, 1617, 1726, 1813
SfaNI GCATC 2 cut(s) 75, 81
SfcI CTRYAG 2 cut(s) 76, 445
SinI GGWCC 2 cut(s) 1119, 1822
SmaI CCCGGG 2 cut(s) 675, 1814
SmiMI CAYNNNNRTG 2 cut(s) 1063, 2025
SnaBI TACGTA 1 cut(s) 609
SseBI AGGCCT 3 cut(s) 1441, 1713, 1956
SsiI CCGC 4 cut(s) 395, 1537, 1779, 1807
SspI AATATT 3 cut(s) 604, 1239, 1496
SstI GAGCTC 2 cut(s) 1454, 1726
StuI AGGCCT 3 cut(s) 1441, 1713, 1956
StyD4I CCNGG 8 cut(s) 55, 672, 673, 1582, 1651, 1811, 1812, 2001
StyI CCWWGG 2 cut(s) 981, 1470
TaaI ACNGT 9 cut(s) 128, 338, 646, 1049, 1399, 1514, 1798, 1871, 2136
TaiI ACGT 4 cut(s) 112, 522, 611, 1386
TaqII GACCGA 2 cut(s) 330, 1215
TatI WGTACW 2 cut(s) 1044, 1135
TfiI GAWTC 5 cut(s) 229, 383, 570, 887, 1276
TscAI CASTG 3 cut(s) 31, 731, 1910
TseFI GTSAC 7 cut(s) 266, 632, 1556, 1634, 1754, 1909, 2018
TseI GCWGC 1 cut(s) 78
Tsp45I GTSAC 7 cut(s) 266, 632, 1556, 1634, 1754, 1909, 2018
TspDTI ATGAA 3 cut(s) 650, 759, 1246
TspGWI ACGGA 3 cut(s) 549, 569, 1834
TspMI CCCGGG 2 cut(s) 673, 1812
TspRI CASTG 3 cut(s) 31, 731, 1910
Van91I CCANNNNNTGG 1 cut(s) 647
VpaK11BI GGWCC 2 cut(s) 1119, 1822
XapI RAATTY 6 cut(s) 501, 541, 1270, 1387, 2042, 2049
XmaI CCCGGG 2 cut(s) 673, 1812
ZrmI AGTACT 1 cut(s) 1046
Zsp2I ATGCAT 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.