pycom13g28520

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000158
Physical Location & Seq
Forward (+)
24297740 .. 24300982
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g28520.3

Sequence Viewer

Length: 2187 bp
ATGATTCTAGGGAAATCTGAAGTGATTTACGTTCATCCATTGATTCATCACAATTTTGTCTTACAATCTGCCCATTTAGTTAAATTCGTCCAAACACAATCCCCCCATATTTTGCTGAGTCTAAGTCATTCAAATCTGTTTTATTTTGTGTCTTTAAGCATTTGGAGTCATAAACACTTTCAAATTCTCATAGTAGTCTTGTTAAGAGTCTTTAAGTTTAGTTTTTGTGTTTTTAAGTCAATTTATATTAGATTAGCACCCCTAGTTAATCCCCGGATAGATCGATCCCTACTTACATCATTACTACAATTGTCACAAATAGGGTTTAATTTGTGTGTCACATTCGTAACGCATCAGTCAAGAATATTAGGTTCTCCACCTCTTCTAATTAGCTTGGGTAGCCATAATATACTGTTAGGTGTCACTCATGGTTTATGGAATGTCCACTACCTCGCTAAAAGGAACCTAATGGATCGTACACCGTGTAAGGTAGAGATTGAAGAAACAACGGAGATGATTCATAATAGACCTCGGGTTAGTTTTGAGCCGCAAGGCCTAATGGGATTTGAATGTCAAGCCCATTTTGAATCCTTAAGGTTGAAAGAACTTTATAACATTTCATCGTTAGAGTTTCTTTTGAAATTAACTAGCAATCTTACTTCCTCTAAGTCACTCATCTTTACATCAATGCTCTCTTTGGTGTGGAGACTTAGAGTTTCTCTAGTTTGGGAACTTGGAGAATCCATTCTACCATCCTCATCCAAGAAATCCATGGACAGCCTTTGCTTATGCAAAGTGGAATCAACAAAGCCCACATCGCCCAGAGGACTGGATCATGTAAGCCTTATATGTATATTCTCATCTCTACCTAGCACGAGGCCTTTTGGGAACTCACTGGCTTTGTGTTCTGTAGGAACTCCGAAGTTAAGTGAGTATTCTCGTGTGAGTTCGCCGGAACCCACATCGTCCAGTGGAGTGGACTATGTAAGCCTTATATGTATATTCCTATCTCGACCTAGCACAAGGCCTTTTGGGAGCACATTGGCTTCAGCAATCCTAGGAACGAACCGTGAGGACGTGGTTGGGGCCCAAAGTGGACAATATTGTGTTATGATGGAGTCGAGCCCGGGAACTCACATGAGAACTTCCCAGTGGGTCACCCATCCTGGGATTGCTCTCATTGTGCTCCCAAAACGCCTCGTGCTAGGTAGAGATGGGAATATACATATAAGGCTTACATGGTCCACCCCCCTGGACGATGTGGGATGTTACAATCCAACCCCCTTAGGAGCCCGACGTCTTCGTCACTTCTGGCCAAGGAGTGGCTCTGATACCAAATTGTCACATCCCTACCCGGGCCCCTACCCCATCTCGGGCTCAACTTCATCGTATGCTCTCACATGCTACTCGCTTAACTTCAGATTTCCTATGGAACCCGAAGCCAGTGAGCTCCCAAAAAGCCTCTTGCTAGGTAGAGATGGGAATATGCATATAAGGTTTATAGGATCCACTCCCTTGGGCGATACGGGATACTTCCAGCCATGGATTGGCTATGATACCAAATTGTCACATCACGGCCCAAGCCCTCACCACATCCTGGGCTTGACTCCACCGTATTTGTTTCTGGGAACTCACACGAGAACTTCCCAATGGGTCACCCATCATGGGATTGCTCTCGTGCGCTACTCGCTTAACTTTGGAGTTCCTACAGAACCCGAAGGCAATGAGCTCCCAAAATGCCTCGTGCTAGGTAGAGATGGGAATATACATATAAGGCTTACAGGATCCACTGCCCTAGGCGATGTGGGATGTTACGTTGAGTTTTGTTTTGTTTTTGAGTGTATACAAGCATTATTTTGCCTTTTAATTGTTAATTGCATGCATAGATGTTACTCAAATGAACTAGTTTTCATAAATATTTCCTTAAGAGTGCTTACTAAGGTGGCCCTTTGTCATGCCGTATATGCATCTTTGTTTAGTTATGATCATCATCTTTCATTCTTTCGTGCGTTCTTTGAGCACTGGTGTTCAACGATCAATAGACTCCACACGGATCAAGGGGAGGTGCCGATTTCACTTTGGGATCTCCACAAGATAGGAGGTTTTCCGATCCATGATAAGTTTTATGACGAGGTTGTTCTTAGAGTGGAGGAATTTTCTCATCGCATTAGTCGAGATTGCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

729

Amino Acids

81.94

Weight (kDa)

8.74

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 612
AasI GACNNNNNNGTC 1 cut(s) 1302
AatII GACGTC 1 cut(s) 1300
AccB1I GGYRCC 1 cut(s) 2065
AccB7I CCANNNNNTGG 3 cut(s) 1322, 1547, 1597
AccI GTMKAC 1 cut(s) 1843
AciI CCGC 1 cut(s) 548
AcoI YGGCCR 1 cut(s) 1313
AcsI RAATTY 3 cut(s) 83, 183, 2153
AcuI CTGAAG 3 cut(s) 39, 1032, 1402
AcyI GRCGYC 1 cut(s) 1297
AfaI GTAC 1 cut(s) 478
AfiI CCNNNNNNNGG 8 cut(s) 1167, 1322, 1355, 1372, 1373, 1547, 1597, 1665
AflII CTTAAG 2 cut(s) 592, 1924
AgsI TTSAA 8 cut(s) 132, 182, 500, 569, 587, 601, 640, 2031
AhlI ACTAGT 1 cut(s) 1903
AjiI CACGTC 1 cut(s) 1078
AjnI CCWGG 3 cut(s) 1165, 1251, 1596
AluBI AGCT 3 cut(s) 393, 1450, 1729
AluI AGCT 3 cut(s) 393, 1450, 1729
Alw21I GWGCWC 5 cut(s) 1040, 1188, 1452, 1731, 2022
Alw26I GTCTC 1 cut(s) 700
Ama87I CYCGRG 4 cut(s) 531, 1126, 1354, 1372
AoxI GGCC 8 cut(s) 553, 878, 1025, 1086, 1313, 1357, 1576, 1944
ApaI GGGCCC 2 cut(s) 1090, 1361
ApoI RAATTY 3 cut(s) 83, 183, 2153
Asp700I GAANNNNTTC 1 cut(s) 744
AspA2I CCTAGG 2 cut(s) 1057, 1795
AspLEI GCGC 1 cut(s) 1683
AspS9I GGNCC 7 cut(s) 1086, 1087, 1242, 1357, 1358, 1577, 1945
AsuC2I CCSGG 5 cut(s) 274, 1127, 1128, 1355, 1356
AsuHPI GGTGA 3 cut(s) 1150, 1580, 1648
AvaI CYCGRG 4 cut(s) 531, 1126, 1354, 1372
AvaII GGWCC 1 cut(s) 1242
AvrII CCTAGG 2 cut(s) 1057, 1795
AxyI CCTNAGG 1 cut(s) 1285
BaeGI GKGCMC 2 cut(s) 1090, 1361
BalI TGGCCA 1 cut(s) 1315
BamHI GGATCC 2 cut(s) 1505, 1784
BanI GGYRCC 1 cut(s) 2065
BanII GRGCYC 7 cut(s) 1090, 1127, 1294, 1361, 1379, 1452, 1731
BauI CACGAG 6 cut(s) 874, 939, 1199, 1636, 1676, 1742
BbsI GAAGAC 1 cut(s) 1292
Bbv12I GWGCWC 5 cut(s) 1040, 1188, 1452, 1731, 2022
BccI CCATC 8 cut(s) 760, 1108, 1170, 1208, 1376, 1472, 1668, 1751
BceAI ACGGC 2 cut(s) 1591, 1943
BciT130I CCWGG 3 cut(s) 1167, 1253, 1598
BciVI GTATCC 1 cut(s) 1523
BclI TGATCA 1 cut(s) 1984
BcnI CCSGG 5 cut(s) 274, 1127, 1128, 1355, 1356
BcoDI GTCTC 1 cut(s) 700
BcuI ACTAGT 1 cut(s) 1903
BfmI CTRYAG 2 cut(s) 909, 1707
BfrI CTTAAG 2 cut(s) 592, 1924
BfuI GTATCC 1 cut(s) 1523
BisI GCNGC 1 cut(s) 548
BlnI CCTAGG 2 cut(s) 1057, 1795
BlsI GCNGC 1 cut(s) 549
Bme1390I CCNGG 8 cut(s) 274, 1127, 1128, 1167, 1253, 1355, 1356, 1598
Bme18I GGWCC 1 cut(s) 1242
BmeT110I CYCGRG 4 cut(s) 531, 1126, 1354, 1372
BmgBI CACGTC 1 cut(s) 1078
BmgT120I GGNCC 7 cut(s) 1086, 1087, 1242, 1357, 1358, 1577, 1945
BmrFI CCNGG 8 cut(s) 274, 1127, 1128, 1167, 1253, 1355, 1356, 1598
BmrI ACTGGG 1 cut(s) 1144
BmsI GCATC 2 cut(s) 361, 1976
BmuI ACTGGG 1 cut(s) 1144
BpiI GAAGAC 1 cut(s) 1292
BpuMI CCSGG 5 cut(s) 274, 1127, 1128, 1355, 1356
Bsa29I ATCGAT 1 cut(s) 283
BsaBI GATNNNNATC 1 cut(s) 1989
BsaHI GRCGYC 1 cut(s) 1297
Bsc4I CCNNNNNNNGG 8 cut(s) 1167, 1322, 1355, 1372, 1373, 1547, 1597, 1665
Bse1I ACTGG 6 cut(s) 834, 900, 969, 1150, 1443, 2027
Bse21I CCTNAGG 1 cut(s) 1285
Bse3DI GCAATG 1 cut(s) 1729
Bse8I GATNNNNATC 1 cut(s) 1989
BseBI CCWGG 3 cut(s) 1167, 1253, 1598
BseCI ATCGAT 1 cut(s) 283
BseGI GGATG 8 cut(s) 34, 752, 758, 1162, 1271, 1345, 1593, 1814
BseJI GATNNNNATC 1 cut(s) 1989
BseLI CCNNNNNNNGG 8 cut(s) 1167, 1322, 1355, 1372, 1373, 1547, 1597, 1665
BseMI GCAATG 1 cut(s) 1729
BseMII CTCAG 1 cut(s) 107
BseNI ACTGG 6 cut(s) 834, 900, 969, 1150, 1443, 2027
BseSI GKGCMC 2 cut(s) 1090, 1361
BshFI GGCC 8 cut(s) 555, 880, 1027, 1088, 1315, 1359, 1578, 1946
BshNI GGYRCC 1 cut(s) 2065
BshVI ATCGAT 1 cut(s) 283
BsiHKAI GWGCWC 5 cut(s) 1040, 1188, 1452, 1731, 2022
BsiHKCI CYCGRG 4 cut(s) 531, 1126, 1354, 1372
BsiSI CCGG 4 cut(s) 274, 953, 1127, 1355
BslI CCNNNNNNNGG 8 cut(s) 1167, 1322, 1355, 1372, 1373, 1547, 1597, 1665
BsmAI GTCTC 1 cut(s) 700
BsnI GGCC 8 cut(s) 555, 880, 1027, 1088, 1315, 1359, 1578, 1946
BsoBI CYCGRG 4 cut(s) 531, 1126, 1354, 1372
Bsp120I GGGCCC 2 cut(s) 1086, 1357
Bsp19I CCATGG 2 cut(s) 771, 1541
BspACI CCGC 1 cut(s) 548
BspANI GGCC 8 cut(s) 555, 880, 1027, 1088, 1315, 1359, 1578, 1946
BspCNI CTCAG 1 cut(s) 108
BspDI ATCGAT 1 cut(s) 283
BspT107I GGYRCC 1 cut(s) 2065
BspTI CTTAAG 2 cut(s) 592, 1924
BsrDI GCAATG 1 cut(s) 1729
BsrI ACTGG 6 cut(s) 834, 900, 969, 1150, 1443, 2027
BssNAI GTATAC 1 cut(s) 1844
BssNI GRCGYC 1 cut(s) 1297
BssSI CACGAG 6 cut(s) 874, 939, 1199, 1636, 1676, 1742
BssT1I CCWWGG 6 cut(s) 771, 1057, 1316, 1515, 1541, 1795
Bst1107I GTATAC 1 cut(s) 1844
Bst2BI CACGAG 6 cut(s) 874, 939, 1199, 1636, 1676, 1742
Bst2UI CCWGG 3 cut(s) 1167, 1253, 1598
Bst4CI ACNGT 4 cut(s) 414, 483, 1070, 1614
Bst6I CTCTTC 1 cut(s) 387
BstACI GRCGYC 1 cut(s) 1297
BstAFI CTTAAG 2 cut(s) 592, 1924
BstC8I GCNNGC 1 cut(s) 1880
BstDEI CTNAG 7 cut(s) 116, 122, 666, 710, 1285, 1938, 2141
BstDSI CCRYGG 2 cut(s) 771, 1541
BstEII GGTNACC 2 cut(s) 1156, 1654
BstF5I GGATG 8 cut(s) 34, 752, 758, 1162, 1271, 1345, 1593, 1814
BstHHI GCGC 1 cut(s) 1683
BstMAI GTCTC 1 cut(s) 700
BstMWI GCNNNNNNNGC 4 cut(s) 399, 817, 1687, 1964
BstNI CCWGG 3 cut(s) 1167, 1253, 1598
BstNSI RCATGY 2 cut(s) 1404, 1882
BstPI GGTNACC 2 cut(s) 1156, 1654
BstSCI CCNGG 8 cut(s) 272, 1125, 1126, 1165, 1251, 1353, 1354, 1596
BstSFI CTRYAG 2 cut(s) 909, 1707
BstSLI GKGCMC 2 cut(s) 1090, 1361
BstV2I GAAGAC 1 cut(s) 1292
BstX2I RGATCY 3 cut(s) 1505, 1784, 2083
BstXI CCANNNNNNTGG 4 cut(s) 829, 976, 1252, 1516
BstYI RGATCY 3 cut(s) 1505, 1784, 2083
BstZ17I GTATAC 1 cut(s) 1844
Bsu15I ATCGAT 1 cut(s) 283
Bsu36I CCTNAGG 1 cut(s) 1285
BsuI GTATCC 1 cut(s) 1523
BsuRI GGCC 8 cut(s) 555, 880, 1027, 1088, 1315, 1359, 1578, 1946
BsuTUI ATCGAT 1 cut(s) 283
BtgI CCRYGG 2 cut(s) 771, 1541
BtgZI GCGATG 3 cut(s) 801, 1815, 2147
BtrI CACGTC 1 cut(s) 1078
BtsCI GGATG 8 cut(s) 34, 752, 758, 1162, 1271, 1345, 1593, 1814
BtsI GCAGTG 1 cut(s) 1788
BtsIMutI CAGTG 6 cut(s) 893, 976, 1157, 1450, 1788, 2020
Cac8I GCNNGC 1 cut(s) 1880
CfoI GCGC 1 cut(s) 1683
Cfr13I GGNCC 7 cut(s) 1086, 1087, 1242, 1357, 1358, 1577, 1945
Cfr9I CCCGGG 2 cut(s) 1126, 1354
ClaI ATCGAT 1 cut(s) 283
Csp6I GTAC 1 cut(s) 477
CspCI CAANNNNNGTGG 2 cut(s) 1599, 1634
CviQI GTAC 1 cut(s) 477
DdeI CTNAG 7 cut(s) 116, 122, 666, 710, 1285, 1938, 2141
DrdI GACNNNNNNGTC 1 cut(s) 1302
DseDI GACNNNNNNGTC 1 cut(s) 1302
EaeI YGGCCR 1 cut(s) 1313
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Ecl136II GAGCTC 2 cut(s) 1450, 1729
Eco130I CCWWGG 6 cut(s) 771, 1057, 1316, 1515, 1541, 1795
Eco147I AGGCCT 3 cut(s) 555, 880, 1027
Eco24I GRGCYC 7 cut(s) 1090, 1127, 1294, 1361, 1379, 1452, 1731
Eco47I GGWCC 1 cut(s) 1242
Eco53kI GAGCTC 2 cut(s) 1450, 1729
Eco57I CTGAAG 3 cut(s) 39, 1032, 1402
Eco81I CCTNAGG 1 cut(s) 1285
Eco88I CYCGRG 4 cut(s) 531, 1126, 1354, 1372
Eco91I GGTNACC 2 cut(s) 1156, 1654
EcoICRI GAGCTC 2 cut(s) 1450, 1729
EcoO109I RGGNCCY 2 cut(s) 1086, 1358
EcoO65I GGTNACC 2 cut(s) 1156, 1654
EcoRII CCWGG 3 cut(s) 1165, 1251, 1596
EcoT14I CCWWGG 6 cut(s) 771, 1057, 1316, 1515, 1541, 1795
EcoT22I ATGCAT 3 cut(s) 1491, 1884, 1969
EcoT38I GRGCYC 7 cut(s) 1090, 1127, 1294, 1361, 1379, 1452, 1731
ErhI CCWWGG 6 cut(s) 771, 1057, 1316, 1515, 1541, 1795
FbaI TGATCA 1 cut(s) 1984
FblI GTMKAC 1 cut(s) 1843
Fnu4HI GCNGC 1 cut(s) 548
FokI GGATG 8 cut(s) 21, 739, 745, 1149, 1278, 1332, 1580, 1821
FriOI GRGCYC 7 cut(s) 1090, 1127, 1294, 1361, 1379, 1452, 1731
Fsp4HI GCNGC 1 cut(s) 548
GlaI GCGC 1 cut(s) 1682
GluI GCNGC 1 cut(s) 548
HaeIII GGCC 8 cut(s) 555, 880, 1027, 1088, 1315, 1359, 1578, 1946
HapII CCGG 4 cut(s) 274, 953, 1127, 1355
HhaI GCGC 1 cut(s) 1683
Hin1I GRCGYC 1 cut(s) 1297
Hin6I GCGC 1 cut(s) 1681
HinP1I GCGC 1 cut(s) 1681
HpaII CCGG 4 cut(s) 274, 953, 1127, 1355
HphI GGTGA 3 cut(s) 1150, 1580, 1648
Hpy166II GTNNAC 6 cut(s) 445, 479, 979, 1097, 1245, 1844
Hpy188I TCNGA 5 cut(s) 19, 921, 1330, 1421, 2109
Hpy188III TCNNGA 3 cut(s) 360, 1011, 2174
Hpy8I GTNNAC 6 cut(s) 445, 479, 979, 1097, 1245, 1844
Hpy99I CGWCG 1 cut(s) 1299
HpyAV CCTTC 1 cut(s) 1712
HpyCH4III ACNGT 4 cut(s) 414, 483, 1070, 1614
HpyCH4IV ACGT 4 cut(s) 30, 1077, 1297, 1815
HpyCH4V TGCA 5 cut(s) 792, 1489, 1878, 1882, 1967
HpyF10VI GCNNNNNNNGC 4 cut(s) 399, 817, 1687, 1964
HpyF3I CTNAG 7 cut(s) 116, 122, 666, 710, 1285, 1938, 2141
HpySE526I ACGT 4 cut(s) 30, 1077, 1297, 1815
Hsp92I GRCGYC 1 cut(s) 1297
HspAI GCGC 1 cut(s) 1681
Ksp22I TGATCA 1 cut(s) 1984
LmnI GCTCC 5 cut(s) 1035, 1191, 1289, 1455, 1734
LweI GCATC 2 cut(s) 361, 1976
MaeII ACGT 4 cut(s) 30, 1077, 1297, 1815
MboII GAAGA 3 cut(s) 374, 512, 1292
MfeI CAATTG 1 cut(s) 308
MflI RGATCY 3 cut(s) 1505, 1784, 2083
MlsI TGGCCA 1 cut(s) 1315
MluNI TGGCCA 1 cut(s) 1315
MlyI GAGTC 6 cut(s) 127, 175, 216, 1127, 1600, 2037
MmeI TCCRAC 1 cut(s) 1301
Mox20I TGGCCA 1 cut(s) 1315
Mph1103I ATGCAT 3 cut(s) 1491, 1884, 1969
MroXI GAANNNNTTC 1 cut(s) 744
MscI TGGCCA 1 cut(s) 1315
Msp20I TGGCCA 1 cut(s) 1315
MspCI CTTAAG 2 cut(s) 592, 1924
MspI CCGG 4 cut(s) 274, 953, 1127, 1355
MspR9I CCNGG 8 cut(s) 274, 1127, 1128, 1167, 1253, 1355, 1356, 1598
MunI CAATTG 1 cut(s) 308
MvaI CCWGG 3 cut(s) 1167, 1253, 1598
MwoI GCNNNNNNNGC 4 cut(s) 399, 817, 1687, 1964
NciI CCSGG 5 cut(s) 274, 1127, 1128, 1355, 1356
NcoI CCATGG 2 cut(s) 771, 1541
NmuCI GTSAC 9 cut(s) 312, 337, 421, 669, 1156, 1304, 1341, 1566, 1654
NsiI ATGCAT 3 cut(s) 1491, 1884, 1969
NspI RCATGY 2 cut(s) 1404, 1882
PaeI GCATGC 1 cut(s) 1882
PceI AGGCCT 3 cut(s) 555, 880, 1027
PcsI WCGNNNNNNNCGW 1 cut(s) 2170
PdmI GAANNNNTTC 1 cut(s) 744
PfeI GAWTC 6 cut(s) 4, 43, 517, 587, 740, 800
PflMI CCANNNNNTGG 3 cut(s) 1322, 1547, 1597
PkrI GCNGC 1 cut(s) 549
PleI GAGTC 6 cut(s) 126, 174, 215, 1126, 1600, 2037
PpsI GAGTC 6 cut(s) 126, 174, 215, 1126, 1600, 2037
PsiI TTATAA 1 cut(s) 612
Psp124BI GAGCTC 2 cut(s) 1452, 1731
Psp6I CCWGG 3 cut(s) 1165, 1251, 1596
PspEI GGTNACC 2 cut(s) 1156, 1654
PspGI CCWGG 3 cut(s) 1165, 1251, 1596
PspOMI GGGCCC 2 cut(s) 1086, 1357
PspPI GGNCC 7 cut(s) 1086, 1087, 1242, 1357, 1358, 1577, 1945
PsuI RGATCY 3 cut(s) 1505, 1784, 2083
RsaI GTAC 1 cut(s) 478
RsaNI GTAC 1 cut(s) 477
SacI GAGCTC 2 cut(s) 1452, 1731
SatI GCNGC 1 cut(s) 548
Sau96I GGNCC 7 cut(s) 1086, 1087, 1242, 1357, 1358, 1577, 1945
SchI GAGTC 6 cut(s) 127, 175, 216, 1127, 1600, 2037
ScrFI CCNGG 8 cut(s) 274, 1127, 1128, 1167, 1253, 1355, 1356, 1598
SfaNI GCATC 2 cut(s) 361, 1976
SfcI CTRYAG 2 cut(s) 909, 1707
SinI GGWCC 1 cut(s) 1242
SmaI CCCGGG 2 cut(s) 1128, 1356
SmlI CTYRAG 2 cut(s) 592, 1924
SmoI CTYRAG 2 cut(s) 592, 1924
SpeI ACTAGT 1 cut(s) 1903
SphI GCATGC 1 cut(s) 1882
SseBI AGGCCT 3 cut(s) 555, 880, 1027
SsiI CCGC 1 cut(s) 548
SspI AATATT 3 cut(s) 366, 1103, 1918
SstI GAGCTC 2 cut(s) 1452, 1731
StuI AGGCCT 3 cut(s) 555, 880, 1027
StyD4I CCNGG 8 cut(s) 272, 1125, 1126, 1165, 1251, 1353, 1354, 1596
StyI CCWWGG 6 cut(s) 771, 1057, 1316, 1515, 1541, 1795
TaaI ACNGT 4 cut(s) 414, 483, 1070, 1614
TaiI ACGT 4 cut(s) 33, 1080, 1300, 1818
TaqI TCGA 4 cut(s) 283, 1012, 1121, 2173
TauI GCSGC 1 cut(s) 550
TfiI GAWTC 6 cut(s) 4, 43, 517, 587, 740, 800
TscAI CASTG 6 cut(s) 900, 976, 1157, 1450, 1795, 2027
TseFI GTSAC 9 cut(s) 312, 337, 421, 669, 1156, 1304, 1341, 1566, 1654
Tsp45I GTSAC 9 cut(s) 312, 337, 421, 669, 1156, 1304, 1341, 1566, 1654
TspDTI ATGAA 8 cut(s) 23, 35, 509, 609, 1374, 1900, 1914, 1986
TspGWI ACGGA 2 cut(s) 524, 2066
TspMI CCCGGG 2 cut(s) 1126, 1354
TspRI CASTG 6 cut(s) 900, 976, 1157, 1450, 1795, 2027
Van91I CCANNNNNTGG 3 cut(s) 1322, 1547, 1597
Vha464I CTTAAG 2 cut(s) 592, 1924
VpaK11BI GGWCC 1 cut(s) 1242
XapI RAATTY 3 cut(s) 83, 183, 2153
XceI RCATGY 2 cut(s) 1404, 1882
XcmI CCANNNNNNNNNTGG 2 cut(s) 769, 1544
XmaI CCCGGG 2 cut(s) 1126, 1354
XmaJI CCTAGG 2 cut(s) 1057, 1795
XmiI GTMKAC 1 cut(s) 1843
XmnI GAANNNNTTC 1 cut(s) 744
ZraI GACGTC 1 cut(s) 1298
Zsp2I ATGCAT 3 cut(s) 1491, 1884, 1969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.