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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 2912, 2988 |
| Acc65I | GGTACC | 1 cut(s) | 2512 |
| AccB1I | GGYRCC | 1 cut(s) | 2512 |
| AccII | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| AciI | CCGC | 6 cut(s) | 239, 1055, 2252, 2460, 2828, 3018 |
| AclI | AACGTT | 3 cut(s) | 481, 1332, 1495 |
| AclWI | GGATC | 7 cut(s) | 86, 99, 683, 774, 974, 1318, 1770 |
| AcoI | YGGCCR | 2 cut(s) | 1201, 1231 |
| AcsI | RAATTY | 9 cut(s) | 40, 1017, 1273, 1710, 2009, 2123, 2563, 2815, 2895 |
| AcuI | CTGAAG | 2 cut(s) | 2452, 3015 |
| AdeI | CACNNNGTG | 1 cut(s) | 1137 |
| AfaI | GTAC | 6 cut(s) | 1113, 1239, 1929, 2258, 2514, 2943 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 961, 1367, 1402, 2276 |
| AflII | CTTAAG | 1 cut(s) | 2450 |
| AflIII | ACRYGT | 2 cut(s) | 452, 1872 |
| AhlI | ACTAGT | 1 cut(s) | 3005 |
| AjnI | CCWGG | 2 cut(s) | 80, 1035 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1286, 1318, 1485, 1517, 2439, 2471 |
| Alw21I | GWGCWC | 4 cut(s) | 152, 270, 851, 2240 |
| Alw44I | GTGCAC | 1 cut(s) | 2236 |
| AlwI | GGATC | 7 cut(s) | 86, 99, 683, 774, 974, 1318, 1770 |
| Ama87I | CYCGRG | 1 cut(s) | 1916 |
| AoxI | GGCC | 4 cut(s) | 230, 290, 1201, 1231 |
| ApaI | GGGCCC | 1 cut(s) | 234 |
| ApaLI | GTGCAC | 1 cut(s) | 2236 |
| ApeKI | GCWGC | 4 cut(s) | 1027, 1082, 1085, 2247 |
| ApoI | RAATTY | 9 cut(s) | 40, 1017, 1273, 1710, 2009, 2123, 2563, 2815, 2895 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2751, 2783 |
| AseI | ATTAAT | 1 cut(s) | 2583 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1064, 1346 |
| Asp718I | GGTACC | 1 cut(s) | 2512 |
| AspA2I | CCTAGG | 1 cut(s) | 287 |
| AspLEI | GCGC | 7 cut(s) | 199, 1978, 2773, 2913, 2937, 2974, 2989 |
| AspS9I | GGNCC | 3 cut(s) | 230, 231, 898 |
| AsuC2I | CCSGG | 3 cut(s) | 1662, 1917, 1918 |
| AsuHPI | GGTGA | 3 cut(s) | 2000, 2019, 2821 |
| AsuII | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| AvaI | CYCGRG | 1 cut(s) | 1916 |
| AvaII | GGWCC | 1 cut(s) | 898 |
| AvrII | CCTAGG | 1 cut(s) | 287 |
| BaeGI | GKGCMC | 3 cut(s) | 234, 1131, 2240 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2496, 2529 |
| BalI | TGGCCA | 1 cut(s) | 1233 |
| BamHI | GGATCC | 1 cut(s) | 91 |
| BanI | GGYRCC | 1 cut(s) | 2512 |
| BanII | GRGCYC | 4 cut(s) | 152, 234, 270, 851 |
| BauI | CACGAG | 1 cut(s) | 2233 |
| BbsI | GAAGAC | 2 cut(s) | 1824, 2953 |
| Bbv12I | GWGCWC | 4 cut(s) | 152, 270, 851, 2240 |
| BbvI | GCAGC | 4 cut(s) | 1014, 1069, 1072, 2259 |
| BccI | CCATC | 3 cut(s) | 127, 1369, 2689 |
| BceAI | ACGGC | 2 cut(s) | 1188, 2107 |
| BciT130I | CCWGG | 2 cut(s) | 82, 1037 |
| BciVI | GTATCC | 1 cut(s) | 416 |
| BclI | TGATCA | 1 cut(s) | 27 |
| BcnI | CCSGG | 3 cut(s) | 1662, 1917, 1918 |
| BcuI | ACTAGT | 1 cut(s) | 3005 |
| BfaI | CTAG | 7 cut(s) | 129, 288, 458, 1109, 1436, 1907, 3006 |
| BfmI | CTRYAG | 2 cut(s) | 48, 1365 |
| BfrI | CTTAAG | 1 cut(s) | 2450 |
| BfuI | GTATCC | 1 cut(s) | 416 |
| BisI | GCNGC | 4 cut(s) | 1028, 1083, 1086, 2248 |
| BlnI | CCTAGG | 1 cut(s) | 287 |
| BlsI | GCNGC | 4 cut(s) | 1029, 1084, 1087, 2249 |
| BmcAI | AGTACT | 1 cut(s) | 1239 |
| Bme1390I | CCNGG | 5 cut(s) | 82, 1037, 1662, 1917, 1918 |
| Bme18I | GGWCC | 1 cut(s) | 898 |
| BmeT110I | CYCGRG | 1 cut(s) | 1916 |
| BmgT120I | GGNCC | 3 cut(s) | 230, 231, 898 |
| BmiI | GGNNCC | 5 cut(s) | 93, 166, 231, 232, 2514 |
| BmrFI | CCNGG | 5 cut(s) | 82, 1037, 1662, 1917, 1918 |
| BmsI | GCATC | 7 cut(s) | 879, 1361, 1383, 1987, 2220, 2293, 2453 |
| BpiI | GAAGAC | 2 cut(s) | 1824, 2953 |
| BpmI | CTGGAG | 2 cut(s) | 307, 423 |
| Bpu14I | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BpuMI | CCSGG | 3 cut(s) | 1662, 1917, 1918 |
| Bsa29I | ATCGAT | 1 cut(s) | 769 |
| BsaAI | YACGTR | 2 cut(s) | 110, 1931 |
| BsaBI | GATNNNNATC | 1 cut(s) | 765 |
| BsaWI | WCCGGW | 1 cut(s) | 1899 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 961, 1367, 1402, 2276 |
| Bse1I | ACTGG | 1 cut(s) | 159 |
| Bse3DI | GCAATG | 2 cut(s) | 1044, 1793 |
| Bse8I | GATNNNNATC | 1 cut(s) | 765 |
| BseBI | CCWGG | 2 cut(s) | 82, 1037 |
| BseCI | ATCGAT | 1 cut(s) | 769 |
| BseGI | GGATG | 3 cut(s) | 719, 1376, 2468 |
| BseJI | GATNNNNATC | 1 cut(s) | 765 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 961, 1367, 1402, 2276 |
| BseMI | GCAATG | 2 cut(s) | 1044, 1793 |
| BseMII | CTCAG | 2 cut(s) | 306, 864 |
| BseNI | ACTGG | 1 cut(s) | 159 |
| BseSI | GKGCMC | 3 cut(s) | 234, 1131, 2240 |
| BseXI | GCAGC | 4 cut(s) | 1014, 1069, 1072, 2259 |
| BsgI | GTGCAG | 1 cut(s) | 2385 |
| Bsh1236I | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| Bsh1285I | CGRYCG | 1 cut(s) | 773 |
| BshFI | GGCC | 4 cut(s) | 232, 292, 1203, 1233 |
| BshNI | GGYRCC | 1 cut(s) | 2512 |
| BshVI | ATCGAT | 1 cut(s) | 769 |
| BsiEI | CGRYCG | 1 cut(s) | 773 |
| BsiHKAI | GWGCWC | 4 cut(s) | 152, 270, 851, 2240 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1916 |
| BsiSI | CCGG | 3 cut(s) | 1662, 1900, 1917 |
| BslFI | GGGAC | 3 cut(s) | 696, 1275, 2292 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 961, 1367, 1402, 2276 |
| BsmFI | GGGAC | 3 cut(s) | 696, 1275, 2292 |
| BsmI | GAATGC | 1 cut(s) | 2071 |
| BsnI | GGCC | 4 cut(s) | 232, 292, 1203, 1233 |
| BsoBI | CYCGRG | 1 cut(s) | 1916 |
| Bsp119I | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| Bsp120I | GGGCCC | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 6 cut(s) | 152, 234, 270, 851, 1131, 2240 |
| Bsp1407I | TGTACA | 1 cut(s) | 2256 |
| Bsp19I | CCATGG | 3 cut(s) | 984, 1198, 2405 |
| BspACI | CCGC | 6 cut(s) | 239, 1055, 2252, 2460, 2828, 3018 |
| BspANI | GGCC | 4 cut(s) | 232, 292, 1203, 1233 |
| BspCNI | CTCAG | 2 cut(s) | 307, 863 |
| BspDI | ATCGAT | 1 cut(s) | 769 |
| BspFNI | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| BspLI | GGNNCC | 5 cut(s) | 93, 166, 231, 232, 2514 |
| BspMAI | CTGCAG | 1 cut(s) | 1369 |
| BspPI | GGATC | 7 cut(s) | 86, 99, 683, 774, 974, 1318, 1770 |
| BspT104I | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| BspT107I | GGYRCC | 1 cut(s) | 2512 |
| BspTI | CTTAAG | 1 cut(s) | 2450 |
| BsrDI | GCAATG | 2 cut(s) | 1044, 1793 |
| BsrGI | TGTACA | 1 cut(s) | 2256 |
| BsrI | ACTGG | 1 cut(s) | 159 |
| BssSI | CACGAG | 1 cut(s) | 2233 |
| BssT1I | CCWWGG | 6 cut(s) | 287, 984, 1006, 1198, 2405, 2763 |
| Bst2BI | CACGAG | 1 cut(s) | 2233 |
| Bst2UI | CCWGG | 2 cut(s) | 82, 1037 |
| Bst4CI | ACNGT | 5 cut(s) | 214, 258, 710, 1242, 2219 |
| Bst6I | CTCTTC | 1 cut(s) | 2192 |
| BstAFI | CTTAAG | 1 cut(s) | 2450 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2244 |
| BstAUI | TGTACA | 1 cut(s) | 2256 |
| BstBAI | YACGTR | 2 cut(s) | 110, 1931 |
| BstBI | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| BstC8I | GCNNGC | 5 cut(s) | 266, 507, 2240, 2252, 2991 |
| BstDEI | CTNAG | 4 cut(s) | 65, 315, 850, 1445 |
| BstDSI | CCRYGG | 3 cut(s) | 984, 1198, 2405 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 959 |
| BstF5I | GGATG | 3 cut(s) | 719, 1376, 2468 |
| BstFNI | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| BstHHI | GCGC | 7 cut(s) | 199, 1978, 2773, 2913, 2937, 2974, 2989 |
| BstMCI | CGRYCG | 1 cut(s) | 773 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 289, 419, 502, 2244 |
| BstNI | CCWGG | 2 cut(s) | 82, 1037 |
| BstNSI | RCATGY | 4 cut(s) | 456, 509, 801, 1876 |
| BstSCI | CCNGG | 5 cut(s) | 80, 1035, 1660, 1915, 1916 |
| BstSFI | CTRYAG | 2 cut(s) | 48, 1365 |
| BstSLI | GKGCMC | 3 cut(s) | 234, 1131, 2240 |
| BstSNI | TACGTA | 1 cut(s) | 110 |
| BstUI | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| BstV1I | GCAGC | 4 cut(s) | 1014, 1069, 1072, 2259 |
| BstV2I | GAAGAC | 2 cut(s) | 1824, 2953 |
| BstX2I | RGATCY | 3 cut(s) | 91, 688, 1775 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 88 |
| BstYI | RGATCY | 3 cut(s) | 91, 688, 1775 |
| Bsu15I | ATCGAT | 1 cut(s) | 769 |
| BsuI | GTATCC | 1 cut(s) | 416 |
| BsuRI | GGCC | 4 cut(s) | 232, 292, 1203, 1233 |
| BsuTUI | ATCGAT | 1 cut(s) | 769 |
| BtgI | CCRYGG | 3 cut(s) | 984, 1198, 2405 |
| BtgZI | GCGATG | 2 cut(s) | 60, 1063 |
| BtsCI | GGATG | 3 cut(s) | 719, 1376, 2468 |
| BtsI | GCAGTG | 1 cut(s) | 2312 |
| BtsIMutI | CAGTG | 4 cut(s) | 152, 706, 1287, 2312 |
| Cac8I | GCNNGC | 5 cut(s) | 266, 507, 2240, 2252, 2991 |
| CfoI | GCGC | 7 cut(s) | 199, 1978, 2773, 2913, 2937, 2974, 2989 |
| Cfr13I | GGNCC | 3 cut(s) | 230, 231, 898 |
| Cfr9I | CCCGGG | 1 cut(s) | 1916 |
| ClaI | ATCGAT | 1 cut(s) | 769 |
| Csp6I | GTAC | 6 cut(s) | 1112, 1238, 1928, 2257, 2513, 2942 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1223, 1258, 2730, 2765 |
| CviQI | GTAC | 6 cut(s) | 1112, 1238, 1928, 2257, 2513, 2942 |
| DdeI | CTNAG | 4 cut(s) | 65, 315, 850, 1445 |
| DraI | TTTAAA | 3 cut(s) | 469, 633, 2352 |
| DraIII | CACNNNGTG | 1 cut(s) | 1137 |
| EaeI | YGGCCR | 2 cut(s) | 1201, 1231 |
| Eam1104I | CTCTTC | 1 cut(s) | 2192 |
| EarI | CTCTTC | 1 cut(s) | 2192 |
| EciI | GGCGGA | 1 cut(s) | 2475 |
| Ecl136II | GAGCTC | 3 cut(s) | 150, 268, 849 |
| Eco105I | TACGTA | 1 cut(s) | 110 |
| Eco130I | CCWWGG | 6 cut(s) | 287, 984, 1006, 1198, 2405, 2763 |
| Eco24I | GRGCYC | 4 cut(s) | 152, 234, 270, 851 |
| Eco47I | GGWCC | 1 cut(s) | 898 |
| Eco53kI | GAGCTC | 3 cut(s) | 150, 268, 849 |
| Eco57I | CTGAAG | 2 cut(s) | 2452, 3015 |
| Eco88I | CYCGRG | 1 cut(s) | 1916 |
| EcoICRI | GAGCTC | 3 cut(s) | 150, 268, 849 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 959 |
| EcoO109I | RGGNCCY | 1 cut(s) | 230 |
| EcoRI | GAATTC | 3 cut(s) | 1273, 1710, 2895 |
| EcoRII | CCWGG | 2 cut(s) | 80, 1035 |
| EcoT14I | CCWWGG | 6 cut(s) | 287, 984, 1006, 1198, 2405, 2763 |
| EcoT22I | ATGCAT | 3 cut(s) | 803, 872, 1376 |
| EcoT38I | GRGCYC | 4 cut(s) | 152, 234, 270, 851 |
| ErhI | CCWWGG | 6 cut(s) | 287, 984, 1006, 1198, 2405, 2763 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2930, 2962 |
| FaqI | GGGAC | 3 cut(s) | 696, 1275, 2292 |
| FauI | CCCGC | 3 cut(s) | 1048, 2259, 2835 |
| FauNDI | CATATG | 4 cut(s) | 24, 492, 881, 1051 |
| FbaI | TGATCA | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 4 cut(s) | 1028, 1083, 1086, 2248 |
| FokI | GGATG | 3 cut(s) | 706, 1383, 2475 |
| FriOI | GRGCYC | 4 cut(s) | 152, 234, 270, 851 |
| Fsp4HI | GCNGC | 4 cut(s) | 1028, 1083, 1086, 2248 |
| FspBI | CTAG | 7 cut(s) | 129, 288, 458, 1109, 1436, 1907, 3006 |
| FspI | TGCGCA | 2 cut(s) | 2912, 2988 |
| GlaI | GCGC | 7 cut(s) | 198, 1977, 2772, 2912, 2936, 2973, 2988 |
| GluI | GCNGC | 4 cut(s) | 1028, 1083, 1086, 2248 |
| GsuI | CTGGAG | 2 cut(s) | 307, 423 |
| HaeIII | GGCC | 4 cut(s) | 232, 292, 1203, 1233 |
| HapII | CCGG | 3 cut(s) | 1662, 1900, 1917 |
| HhaI | GCGC | 7 cut(s) | 199, 1978, 2773, 2913, 2937, 2974, 2989 |
| Hin6I | GCGC | 7 cut(s) | 197, 1976, 2771, 2911, 2935, 2972, 2987 |
| HinP1I | GCGC | 7 cut(s) | 197, 1976, 2771, 2911, 2935, 2972, 2987 |
| HincII | GTYRAC | 3 cut(s) | 1414, 2230, 2528 |
| HindII | GTYRAC | 3 cut(s) | 1414, 2230, 2528 |
| HinfI | GANTC | 8 cut(s) | 394, 1163, 1467, 1903, 2662, 2759, 3025, 3035 |
| HpaII | CCGG | 3 cut(s) | 1662, 1900, 1917 |
| HphI | GGTGA | 3 cut(s) | 2000, 2019, 2821 |
| Hpy166II | GTNNAC | 8 cut(s) | 1099, 1414, 1928, 2183, 2230, 2238, 2528, 2944 |
| Hpy188I | TCNGA | 9 cut(s) | 180, 316, 853, 1000, 2041, 2322, 2667, 2718, 3034 |
| Hpy8I | GTNNAC | 8 cut(s) | 1099, 1414, 1928, 2183, 2230, 2238, 2528, 2944 |
| Hpy99I | CGWCG | 4 cut(s) | 942, 2759, 2864, 2935 |
| HpyCH4III | ACNGT | 5 cut(s) | 214, 258, 710, 1242, 2219 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 289, 419, 502, 2244 |
| HpyF3I | CTNAG | 4 cut(s) | 65, 315, 850, 1445 |
| HspAI | GCGC | 7 cut(s) | 197, 1976, 2771, 2911, 2935, 2972, 2987 |
| KpnI | GGTACC | 1 cut(s) | 2516 |
| Ksp22I | TGATCA | 1 cut(s) | 27 |
| LmnI | GCTCC | 8 cut(s) | 147, 261, 538, 591, 846, 1035, 1918, 3020 |
| Lsp1109I | GCAGC | 4 cut(s) | 1014, 1069, 1072, 2259 |
| LweI | GCATC | 7 cut(s) | 879, 1361, 1383, 1987, 2220, 2293, 2453 |
| MaeI | CTAG | 7 cut(s) | 129, 288, 458, 1109, 1436, 1907, 3006 |
| MaeIII | GTNAC | 6 cut(s) | 299, 964, 1807, 1878, 2025, 2809 |
| MboII | GAAGA | 6 cut(s) | 964, 1829, 2179, 2406, 2953, 3030 |
| MfeI | CAATTG | 2 cut(s) | 1524, 1573 |
| MflI | RGATCY | 3 cut(s) | 91, 688, 1775 |
| MhlI | GDGCHC | 6 cut(s) | 152, 234, 270, 851, 1131, 2240 |
| MlsI | TGGCCA | 1 cut(s) | 1233 |
| MluNI | TGGCCA | 1 cut(s) | 1233 |
| MlyI | GAGTC | 3 cut(s) | 1172, 1461, 3019 |
| MmeI | TCCRAC | 1 cut(s) | 1516 |
| Mox20I | TGGCCA | 1 cut(s) | 1233 |
| Mph1103I | ATGCAT | 3 cut(s) | 803, 872, 1376 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1064, 1346 |
| MscI | TGGCCA | 1 cut(s) | 1233 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1171, 1197, 1554 |
| Msp20I | TGGCCA | 1 cut(s) | 1233 |
| MspA1I | CMGCKG | 2 cut(s) | 1027, 2254 |
| MspCI | CTTAAG | 1 cut(s) | 2450 |
| MspI | CCGG | 3 cut(s) | 1662, 1900, 1917 |
| MspR9I | CCNGG | 5 cut(s) | 82, 1037, 1662, 1917, 1918 |
| MunI | CAATTG | 2 cut(s) | 1524, 1573 |
| Mva1269I | GAATGC | 1 cut(s) | 2071 |
| MvaI | CCWGG | 2 cut(s) | 82, 1037 |
| MvnI | CGCG | 5 cut(s) | 197, 199, 2771, 2935, 2972 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 289, 419, 502, 2244 |
| NciI | CCSGG | 3 cut(s) | 1662, 1917, 1918 |
| NcoI | CCATGG | 3 cut(s) | 984, 1198, 2405 |
| NdeI | CATATG | 4 cut(s) | 24, 492, 881, 1051 |
| NlaIV | GGNNCC | 5 cut(s) | 93, 166, 231, 232, 2514 |
| NmeAIII | GCCGAG | 1 cut(s) | 318 |
| NmuCI | GTSAC | 4 cut(s) | 299, 1807, 2025, 2809 |
| NsbI | TGCGCA | 2 cut(s) | 2912, 2988 |
| NsiI | ATGCAT | 3 cut(s) | 803, 872, 1376 |
| NspI | RCATGY | 4 cut(s) | 456, 509, 801, 1876 |
| NspV | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| PaeI | GCATGC | 1 cut(s) | 509 |
| PasI | CCCWGGG | 1 cut(s) | 81 |
| PciI | ACATGT | 2 cut(s) | 452, 1872 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2751 |
| PctI | GAATGC | 1 cut(s) | 2071 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1064, 1346 |
| PfeI | GAWTC | 5 cut(s) | 394, 1903, 2662, 2759, 3035 |
| PflFI | GACNNNGTC | 1 cut(s) | 1384 |
| PkrI | GCNGC | 4 cut(s) | 1029, 1084, 1087, 2249 |
| Ple19I | CGATCG | 1 cut(s) | 773 |
| PleI | GAGTC | 3 cut(s) | 1171, 1461, 3019 |
| PpsI | GAGTC | 3 cut(s) | 1171, 1461, 3019 |
| Ppu21I | YACGTR | 2 cut(s) | 110, 1931 |
| PscI | ACATGT | 2 cut(s) | 452, 1872 |
| PshBI | ATTAAT | 1 cut(s) | 2583 |
| Psp124BI | GAGCTC | 3 cut(s) | 152, 270, 851 |
| Psp1406I | AACGTT | 3 cut(s) | 481, 1332, 1495 |
| Psp6I | CCWGG | 2 cut(s) | 80, 1035 |
| PspGI | CCWGG | 2 cut(s) | 80, 1035 |
| PspN4I | GGNNCC | 5 cut(s) | 93, 166, 231, 232, 2514 |
| PspOMI | GGGCCC | 1 cut(s) | 230 |
| PspPI | GGNCC | 3 cut(s) | 230, 231, 898 |
| PstI | CTGCAG | 1 cut(s) | 1369 |
| PsuI | RGATCY | 3 cut(s) | 91, 688, 1775 |
| PsyI | GACNNNGTC | 1 cut(s) | 1384 |
| PvuI | CGATCG | 1 cut(s) | 773 |
| PvuII | CAGCTG | 1 cut(s) | 1027 |
| RsaI | GTAC | 6 cut(s) | 1113, 1239, 1929, 2258, 2514, 2943 |
| RsaNI | GTAC | 6 cut(s) | 1112, 1238, 1928, 2257, 2513, 2942 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1171, 1197, 1554 |
| SacI | GAGCTC | 3 cut(s) | 152, 270, 851 |
| SatI | GCNGC | 4 cut(s) | 1028, 1083, 1086, 2248 |
| Sau96I | GGNCC | 3 cut(s) | 230, 231, 898 |
| ScaI | AGTACT | 1 cut(s) | 1239 |
| SchI | GAGTC | 3 cut(s) | 1172, 1461, 3019 |
| ScrFI | CCNGG | 5 cut(s) | 82, 1037, 1662, 1917, 1918 |
| SduI | GDGCHC | 6 cut(s) | 152, 234, 270, 851, 1131, 2240 |
| SfaNI | GCATC | 7 cut(s) | 879, 1361, 1383, 1987, 2220, 2293, 2453 |
| SfcI | CTRYAG | 2 cut(s) | 48, 1365 |
| SfuI | TTCGAA | 4 cut(s) | 38, 417, 1305, 1708 |
| SinI | GGWCC | 1 cut(s) | 898 |
| SmaI | CCCGGG | 1 cut(s) | 1918 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1171, 1197, 1554 |
| SmlI | CTYRAG | 2 cut(s) | 269, 2450 |
| SmoI | CTYRAG | 2 cut(s) | 269, 2450 |
| SnaBI | TACGTA | 1 cut(s) | 110 |
| SpeI | ACTAGT | 1 cut(s) | 3005 |
| SphI | GCATGC | 1 cut(s) | 509 |
| SsiI | CCGC | 6 cut(s) | 239, 1055, 2252, 2460, 2828, 3018 |
| SspI | AATATT | 1 cut(s) | 2343 |
| SspMI | CTAG | 7 cut(s) | 129, 288, 458, 1109, 1436, 1907, 3006 |
| SstI | GAGCTC | 3 cut(s) | 152, 270, 851 |
| StyD4I | CCNGG | 5 cut(s) | 80, 1035, 1660, 1915, 1916 |
| StyI | CCWWGG | 6 cut(s) | 287, 984, 1006, 1198, 2405, 2763 |
| TaaI | ACNGT | 5 cut(s) | 214, 258, 710, 1242, 2219 |
| TaqII | GACCGA | 1 cut(s) | 852 |
| TatI | WGTACW | 3 cut(s) | 1111, 1237, 2256 |
| TfiI | GAWTC | 5 cut(s) | 394, 1903, 2662, 2759, 3035 |
| TscAI | CASTG | 4 cut(s) | 159, 713, 1287, 2319 |
| TseFI | GTSAC | 4 cut(s) | 299, 1807, 2025, 2809 |
| TseI | GCWGC | 4 cut(s) | 1027, 1082, 1085, 2247 |
| Tsp45I | GTSAC | 4 cut(s) | 299, 1807, 2025, 2809 |
| TspGWI | ACGGA | 4 cut(s) | 157, 721, 1230, 2919 |
| TspMI | CCCGGG | 1 cut(s) | 1916 |
| TspRI | CASTG | 4 cut(s) | 159, 713, 1287, 2319 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1384 |
| Vha464I | CTTAAG | 1 cut(s) | 2450 |
| VneI | GTGCAC | 1 cut(s) | 2236 |
| VpaK11BI | GGWCC | 1 cut(s) | 898 |
| VspI | ATTAAT | 1 cut(s) | 2583 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 959 |
| XapI | RAATTY | 9 cut(s) | 40, 1017, 1273, 1710, 2009, 2123, 2563, 2815, 2895 |
| XceI | RCATGY | 4 cut(s) | 456, 509, 801, 1876 |
| XmaI | CCCGGG | 1 cut(s) | 1916 |
| XmaJI | CCTAGG | 1 cut(s) | 287 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1064, 1346 |
| XspI | CTAG | 7 cut(s) | 129, 288, 458, 1109, 1436, 1907, 3006 |
| ZrmI | AGTACT | 1 cut(s) | 1239 |
| Zsp2I | ATGCAT | 3 cut(s) | 803, 872, 1376 |