pycom13g28460

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
24262709 .. 24267607
4899 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g28460.19

Sequence Viewer

Length: 3726 bp
ATGTCCAAGTATACCCTAATCATCTGTACGCTAGATGCAAATGAGATATTTACGAAGGATATGGAGCATAAGGTTCCATATTGGAATGTGAGGCAACCATATCTAAGTACAATTGGCGTTTGTTCTTTTGGCATAAAGCAGCACTATACCTACACGCCACCACTAATCTTTTGGTATATTCAAGATTCTTTCAATATGATTGTAACCAAGTGTCAGATTTTTCTACTATGCCGTTTCTCTGTGGCGAAGAAAAGAAGACCCAGTGCACAACTTTTCCGGATTAGAAGACTCATTCTGAGGATTTGTAGGGGACGACTTAAGCTTTCAAAAGTGACATTTTGGGACCAAATCAGAGTTGATTTGTTTGGTCAAAAGTGTGATTTTCTGAGAAGTCCAAATTTTATTTTAAATAGGAAACTTTTATTAGTTGTTTTATTATTTTATTATTTAGCCATTAGGAGGGGGAACGCATCAAATTGGAGAACTTGGCTAGGGTTTGACAATTTGTATTTTTTTTCAAGGTGTTTAGGGTTGTTCGTAACTAATTTTCTATTTTCAATAAAATTCCTTTTCTTTGCCACGAGCCTTAGCATGAATATATATTCAATTTCTTATGATGTTATGCATGTGTACTTTGAATTATTAATCATTGTGCTTAAATTGTCTCTATCAGATGCAATTCGGTCGAAAAATCATCGGAGGATTGAATATTGCTTCTTGTGGTTAATAATTGTAATTTCACTCAAGGCGAATATCACGCTCTTAGGGGTTTTCATGGTTTTTCAAAGAGTTTTCACAAAACTTAATGAGTCTTGCATGTTTATATTTGATCTGAATATCACAGACGGGTTGCATGTTATGGAACATCCCACATCGCCTGGGGAAGTGGATCCTGTAAGCCTTATATGTATATTCCCATATGTACTTAGCACGAGGCCTTTCGGGATTCGTGCGAGAGCATTCCTAGGATGGGGTGACCCACTGGGAAGTTCACGTGTGAGTTCCCAGAAACAAAACTGTGAGGGCATGGTCGGGGCCCAAAGCGGACAATATCGGGTGGAGTCTAGCTTGGGATGCGGTGGGGGTCCGGGCGGGGATGCACTAGGAAAATCTAACCTTCAAAGTTGCATGTGTGACGGCGGAATCCTAGGCTTTCACAACTTTAATTTTCAAAAACGTTTTCTTTTTCATTTTTATTATTTAAAATTCCAAAATCAATCTTTTTCAAACCTTCCCACATCGCCCAGGGGAGTGGATCCTATAAGCCTTATATGTATATTCTCATCTCTACCTAGCATGAGGCCTTTTGGGACGAGTTCGTGCGAGAGCAATCTCAGGATGGGTGACGCACTGGGAAGTTCTCGTGTGAGTTCCCAGAAACAAAACCGTGAGGGTGTGGTAGGGGCCCAAAGCGAGCAATATTGTGCTACGGTGGAGTCGAGCCTGGGATGTGGTGGGGGCCCGGACCAAGATGTGACAATTTGGTATCAGACATCGCCTAGGGGAGTGGATCCTATAAGCCTTATATGTATATTCCCATCTCTACCTAGCACGAGGCTTTTTGGGAGCTCACTGGCTTCAGTTTCCATCGGAACTCTGAAGTTAAGCGAGTTTACGGTCCAAATCGGACAATATCGTGCTACGGTGGAGTCGAGCCTAGGATATGGTAGGGGCCCAGGCCGGGATGTGACACAATCCCTATGGAAAACAACTTTGCTTGAGCTGTTATACTATGATAACCTTGTACTCTTGCAAGTATTTTTTATCGCTGAATCAGACTATCTATTTGACCGCATAAGGTACATTCCCAAATGGTTATGTCTTTACCATAAAGGAACACTACAATATCTTGGAGGTCAACTAGATAGACCTTTTGGTGCAAAAACTTTGAATTATTCCAAGACTCACTGTATGTCATCACGTGAGAGATATGGTCGAGAACTCTTGTTGAGCATATTCGAAGTCCCTGCGATTTTCATCCATCGTATCGACCAGATCATGATACATCCAACAACTCAACGCCAAGCATATTGTGTCTACATCAGCATGAGCATTAGAAGTTTGAAGTCAAGCAGCCGGATCCTAGACAACATTGCCAACCTTTGCACATCACTACCGAAGTCTACCTTTCAGAAGCTTGTCCAAGGAATTAGTATACGTAACTTTCTCATTTGCAATGCTTATATGTATACTCATTTGACCTTAATGTACTATTTTTCCCTATGCAACTGTCATGGGTTGGTCATACCCTTGTGTACGTTATACTTGCATCCCAAAGACCTATATTTTTTACTTAATGCAACTTCTCACATTTCTCCTTTAGCTATAGGCTTTTGTCCCACCTTAGGTTTTGCCATAGCAAGGTTTTGTGAACAACTTCATCAACTGCTTCTACATTTGCCAAAAGATTTGATGCACCATCTACTTGAGTATTTGCATACTCAAGGAGGAGTGTTTAGGAATCCTTTGGGACCTAGAAAGTCTTTCCTAATAGACTTTGTATTACTTGGAGAGCAAGTTTCTCTCCTCCTTATTACTATAAATATAGGCACAAGGACTAGAGAATTAACACACAATTCCTCAAGTCTATTCTCCACTCTTTTTTTCTCCATGCCGCACCCCTCAGTATCGTTTGAGAGTTTTTGGTGCTTGGTAAACGCCCCAAATCAGCTTTATTTCAAAGTTTCAGATGAAAAAAAGCTAAAAACGGGAAGCTGCATTTTGCAGCTTCAAAAAGCAGCTTATTTGAGAAACACGGATGCCCTCCTTTCTCTTTTCTCCTGCCTTCCTCACACTTTCAGACTCTCTCTCACACGCCTTCTCGCAAAACATAGACTCTCTCTCACATGCTCTCTTCCTCTATTGCCTACCACTGCACCTCTTCCTCCTCTTCCTTTTCGTCTCTTTCCATCAGTCTCAGCGCCACAGACACCGTCGTCGCCTTCCCTTATTCTATTGTCGTCGCCTTCCTTCCTTTCTCTGGTAAGTTTCTCTTGTCTAAAATTTTGTTATTTATTTAGGGGTGGGAAGAGTGAAGGGATGATGTGTATGGGTGTCGGGAAAAAAAACTGGGGACGGAGGAAACAATTAGGGAAAAAATTGGGGAAAAAATTAGGGTTTGTGGAGGAAACAAACCCTAAAAGAGGTAGGGGAGAGAGAGATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGCGAAGCAAGAGGTAGTCGTTTTCATACTTATATATTTTTAATTTCTCTTGTCTGTGCATTGTTCTTTATTGCCTATGAATACCATTTCGATCGATCAATTGTGTCCCAAGTTTCCAAATCCCACAGCTCGGTTCAATTCAATTCTTTTTTTTTTTGTTTTTTTGTAATTGTTCTTGTATTGAATCGGTTTGTCAATTCTGAGGTTCTTTGGTTAATTTGGAGAATTGGGATCGAATCATTTATGGGTTTTTCTCGGTTTCTTGTTTTTGTTCTCTTAGTGGACGCTGCTGATTGCCATCGCCGTGGTTTGGTGGTAAGATTAATGGGTTTGTGTTGGTTTGTGTTTAATTTAAAAATGAATTGGATTCAATTTGTTGTTATTGTTGATGTTCTTTCAATTCAATTGATTGTTGTTATTTTGAATGTTTATATATCATTTGATCGTGCATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1242

Amino Acids

142.45

Weight (kDa)

9.43

Isoelectric Point (pI)

44.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000158)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10163
malus_domestica MD04G1068000.v1.1 MD05G1130900.v1.1 MD06G1153600.v1.1 MD10G1255900.v1.1 MD10G1282000.v1.1 MD13G1075400.v1.1 MD13G1192400.v1.1
pyrus_communis pycom01g00130 pycom01g00390 pycom01g00700 pycom01g00720 pycom01g00750 pycom01g00850 pycom01g00870 pycom01g00910 pycom01g01250 pycom01g01560 pycom01g01680 pycom01g01860 pycom01g01900 pycom01g01910 pycom01g02200 pycom01g02260 pycom01g02270 pycom01g02280 pycom01g02330 pycom01g02480 pycom01g02720 pycom01g02730 pycom01g02750 pycom01g02770 pycom01g02780 pycom01g02860 pycom01g02910 pycom01g03540 pycom01g04090 pycom01g04100 pycom01g04150 pycom01g04250 pycom01g04430 pycom01g11810 pycom01g11860 pycom01g11940 pycom01g21380 pycom02g06650 pycom02g08490 pycom02g08600 pycom02g18230 pycom02g18450 pycom02g18800 pycom02g19150 pycom02g20740 pycom02g21340 pycom02g26210 pycom03g12060 pycom03g19060 pycom03g19100 pycom03g19120 pycom04g06890 pycom04g08960 pycom05g01790 pycom05g07910 pycom05g08080 pycom05g08100 pycom05g08570 pycom05g21500 pycom05g22400 pycom05g22510 pycom05g22620 pycom05g23020 pycom05g23720 pycom05g23890 pycom05g24040 pycom07g12080 pycom08g07930 pycom08g11940 pycom09g12120 pycom10g03890 pycom10g23360 pycom10g28250 pycom11g02850 pycom11g14370 pycom11g14400 pycom11g21840 pycom11g21860 pycom11g21980 pycom11g23580 pycom11g23650 pycom11g24050 pycom11g25610 pycom12424g00060 pycom1256g00130 pycom12661g00030 pycom12g09520 pycom12g09530 pycom12g09660 pycom12g09730 pycom12g11210 pycom12g16710 pycom12g16740 pycom12g16750 pycom13g08800 pycom13g18580 pycom13g18670 pycom13g18770 pycom13g22900 pycom13g23050 pycom13g23160 pycom13g23480 pycom13g23610 pycom13g23660 pycom13g23790 pycom13g23840 pycom13g24010 pycom13g24140 pycom13g24210 pycom13g24300 pycom13g24310 pycom13g24480 pycom13g24520 pycom13g24570 pycom13g24730 pycom13g24760 pycom13g24820 pycom13g25010 pycom13g25020 pycom13g25270 pycom13g25620 pycom13g25670 pycom13g25760 pycom13g25800 pycom13g25900 pycom13g26620 pycom13g26640 pycom13g26670 pycom13g26940 pycom13g27040 pycom13g27130 pycom13g27530 pycom13g27770 pycom13g27830 pycom13g27920 pycom13g27940 pycom13g28100 pycom13g28420 pycom13g28430 pycom13g28460 pycom13g28520 pycom13g29160 pycom14g05380 pycom15g03480 pycom15g04370 pycom15g27500 pycom16g13590 pycom16g13610 pycom16g13630 pycom16g14390 pycom16g18310 pycom17g01940 pycom17g04000 pycom17g16100 pycom17g16220 pycom17g16230 pycom17g16340 pycom17g16430 pycom17g16460 pycom17g16740 pycom17g16960 pycom17g17020 pycom17g17090 pycom17g17100 pycom17g17170 pycom17g17430 pycom17g17850 pycom17g18230 pycom17g18250 pycom17g18380 pycom17g21170 pycom17g21330 pycom520g00150 pycom520g00160 pycom808g00030 pycom808g00160 pycom808g00250 pycom808g00290
rosa_chinensis RchiOBHm_Chr5g0054451

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2935
AccI GTMKAC 5 cut(s) 11, 2037, 2123, 2155, 2189
AccIII TCCGGA 1 cut(s) 276
AciI CCGC 6 cut(s) 1044, 1077, 1092, 1140, 1792, 2615
AclI AACGTT 1 cut(s) 1177
AclWI GGATC 9 cut(s) 884, 897, 1250, 1263, 1505, 1518, 2074, 2087, 3509
AcsI RAATTY 4 cut(s) 397, 563, 1205, 3002
AcuI CTGAAG 2 cut(s) 1563, 1619
AcvI CACGTG 2 cut(s) 995, 1922
AfaI GTAC 8 cut(s) 28, 109, 632, 924, 1746, 1802, 2210, 2257
AfiI CCNNNNNNNGG 9 cut(s) 459, 970, 1681, 2345, 2361, 2980, 3143, 3400, 3580
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 1 cut(s) 994
AjnI CCWGG 4 cut(s) 877, 1244, 1443, 1675
Alw21I GWGCWC 2 cut(s) 268, 1571
Alw26I GTCTC 3 cut(s) 669, 2906, 2920
Alw44I GTGCAC 1 cut(s) 264
AlwI GGATC 9 cut(s) 884, 897, 1250, 1263, 1505, 1518, 2074, 2087, 3509
Aor13HI TCCGGA 1 cut(s) 276
AoxI GGCC 7 cut(s) 935, 1035, 1301, 1404, 1459, 1672, 1678
ApaI GGGCCC 4 cut(s) 1039, 1408, 1463, 1676
ApaLI GTGCAC 1 cut(s) 264
ApeKI GCWGC 6 cut(s) 139, 2073, 2715, 2725, 2738, 3557
ApoI RAATTY 4 cut(s) 397, 563, 1205, 3002
ArsI GACNNNNNNTTYG 2 cut(s) 1769, 1801
AseI ATTAAT 2 cut(s) 644, 3593
Asp700I GAANNNNTTC 1 cut(s) 2376
AspA2I CCTAGG 4 cut(s) 964, 1147, 1499, 1657
AspLEI GCGC 1 cut(s) 2923
AsuC2I CCSGG 3 cut(s) 1089, 1463, 1682
AsuHPI GGTGA 2 cut(s) 986, 1355
AsuII TTCGAA 1 cut(s) 1959
AvaII GGWCC 5 cut(s) 343, 1085, 1465, 1618, 2471
AvrII CCTAGG 4 cut(s) 964, 1147, 1499, 1657
AxyI CCTNAGG 1 cut(s) 2344
BaeGI GKGCMC 5 cut(s) 268, 1039, 1408, 1463, 1676
BamHI GGATCC 4 cut(s) 889, 1255, 1510, 2079
BanII GRGCYC 5 cut(s) 1039, 1408, 1463, 1571, 1676
BauI CACGAG 4 cut(s) 580, 931, 1362, 1552
BbrPI CACGTG 2 cut(s) 995, 1922
BbsI GAAGAC 2 cut(s) 262, 292
Bbv12I GWGCWC 2 cut(s) 268, 1571
BbvI GCAGC 6 cut(s) 151, 2085, 2702, 2737, 2750, 3544
BccI CCATC 8 cut(s) 963, 1333, 1546, 1595, 1989, 2427, 2917, 3576
BceAI ACGGC 3 cut(s) 216, 1153, 3558
BcgI CGANNNNNNTGC 4 cut(s) 666, 700, 1949, 1983
BciT130I CCWGG 4 cut(s) 879, 1246, 1445, 1677
BcnI CCSGG 3 cut(s) 1089, 1463, 1682
BcoDI GTCTC 3 cut(s) 669, 2906, 2920
BfmI CTRYAG 1 cut(s) 2325
BfoI RGCGCY 1 cut(s) 2924
BfrI CTTAAG 1 cut(s) 317
BisI GCNGC 7 cut(s) 140, 2074, 2615, 2716, 2726, 2739, 3558
BlnI CCTAGG 4 cut(s) 964, 1147, 1499, 1657
BlsI GCNGC 7 cut(s) 141, 2075, 2616, 2717, 2727, 2740, 3559
Bme1390I CCNGG 7 cut(s) 879, 1089, 1246, 1445, 1463, 1677, 1682
Bme18I GGWCC 5 cut(s) 343, 1085, 1465, 1618, 2471
BmrFI CCNGG 7 cut(s) 879, 1089, 1246, 1445, 1463, 1677, 1682
BmrI ACTGGG 4 cut(s) 255, 992, 1361, 3079
BmsI GCATC 8 cut(s) 25, 479, 664, 1064, 1087, 2278, 2403, 2749
BmuI ACTGGG 4 cut(s) 255, 992, 1361, 3079
BpiI GAAGAC 2 cut(s) 262, 292
Bpu10I CCTNAGC 1 cut(s) 587
Bpu14I TTCGAA 1 cut(s) 1959
BpuEI CTTGAG 5 cut(s) 728, 1739, 2427, 2447, 2566
BpuMI CCSGG 3 cut(s) 1089, 1463, 1682
Bsa29I ATCGAT 1 cut(s) 3364
BsaAI YACGTR 3 cut(s) 995, 1922, 2159
BsaBI GATNNNNATC 2 cut(s) 1976, 3567
BsaWI WCCGGW 1 cut(s) 276
BsaXI ACNNNNNCTCC 2 cut(s) 2502, 2532
Bsc4I CCNNNNNNNGG 9 cut(s) 459, 970, 1681, 2345, 2361, 2980, 3143, 3400, 3580
Bse1I ACTGG 5 cut(s) 261, 987, 1356, 1578, 3074
Bse21I CCTNAGG 1 cut(s) 2344
Bse3DI GCAATG 2 cut(s) 2091, 2182
Bse8I GATNNNNATC 2 cut(s) 1976, 3567
BseAI TCCGGA 1 cut(s) 276
BseBI CCWGG 4 cut(s) 879, 1246, 1445, 1677
BseCI ATCGAT 1 cut(s) 3364
BseJI GATNNNNATC 2 cut(s) 1976, 3567
BseLI CCNNNNNNNGG 9 cut(s) 459, 970, 1681, 2345, 2361, 2980, 3143, 3400, 3580
BseMI GCAATG 2 cut(s) 2091, 2182
BseMII CTCAG 6 cut(s) 287, 377, 1348, 2637, 2931, 3462
BseNI ACTGG 5 cut(s) 261, 987, 1356, 1578, 3074
BseRI GAGGAG 3 cut(s) 2463, 2516, 2877
BseSI GKGCMC 5 cut(s) 268, 1039, 1408, 1463, 1676
BseXI GCAGC 6 cut(s) 151, 2085, 2702, 2737, 2750, 3544
BsgI GTGCAG 1 cut(s) 2859
Bsh1285I CGRYCG 2 cut(s) 686, 3364
BshFI GGCC 7 cut(s) 937, 1037, 1303, 1406, 1461, 1674, 1680
BshVI ATCGAT 1 cut(s) 3364
BsiEI CGRYCG 2 cut(s) 686, 3364
BsiHKAI GWGCWC 2 cut(s) 268, 1571
BsiSI CCGG 5 cut(s) 277, 1088, 1463, 1681, 2077
BslFI GGGAC 8 cut(s) 324, 356, 1324, 1949, 2322, 2484, 3087, 3361
BslI CCNNNNNNNGG 9 cut(s) 459, 970, 1681, 2345, 2361, 2980, 3143, 3400, 3580
BsmAI GTCTC 3 cut(s) 669, 2906, 2920
BsmBI CGTCTC 1 cut(s) 2906
BsmFI GGGAC 8 cut(s) 324, 356, 1324, 1949, 2322, 2484, 3087, 3361
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 7 cut(s) 937, 1037, 1303, 1406, 1461, 1674, 1680
Bsp119I TTCGAA 1 cut(s) 1959
Bsp120I GGGCCC 4 cut(s) 1035, 1404, 1459, 1672
Bsp1286I GDGCHC 6 cut(s) 268, 1039, 1408, 1463, 1571, 1676
Bsp13I TCCGGA 1 cut(s) 276
BspACI CCGC 6 cut(s) 1044, 1077, 1092, 1140, 1792, 2615
BspANI GGCC 7 cut(s) 937, 1037, 1303, 1406, 1461, 1674, 1680
BspCNI CTCAG 6 cut(s) 288, 378, 1347, 2636, 2930, 3463
BspDI ATCGAT 1 cut(s) 3364
BspEI TCCGGA 1 cut(s) 276
BspHI TCATGA 1 cut(s) 1998
BspPI GGATC 9 cut(s) 884, 897, 1250, 1263, 1505, 1518, 2074, 2087, 3509
BspT104I TTCGAA 1 cut(s) 1959
BspTI CTTAAG 1 cut(s) 317
BsrDI GCAATG 2 cut(s) 2091, 2182
BsrI ACTGG 5 cut(s) 261, 987, 1356, 1578, 3074
BssNAI GTATAC 3 cut(s) 12, 2156, 2190
BssSI CACGAG 4 cut(s) 580, 931, 1362, 1552
BssT1I CCWWGG 5 cut(s) 964, 1147, 1499, 1657, 2143
Bst1107I GTATAC 3 cut(s) 12, 2156, 2190
Bst2BI CACGAG 4 cut(s) 580, 931, 1362, 1552
Bst2UI CCWGG 4 cut(s) 879, 1246, 1445, 1677
Bst4CI ACNGT 8 cut(s) 1019, 1388, 1432, 1618, 1645, 1910, 2231, 2934
Bst6I CTCTTC 4 cut(s) 2859, 2886, 2895, 3023
BstAFI CTTAAG 1 cut(s) 317
BstBAI YACGTR 3 cut(s) 995, 1922, 2159
BstBI TTCGAA 1 cut(s) 1959
BstC8I GCNNGC 1 cut(s) 1415
BstDSI CCRYGG 1 cut(s) 3574
BstEII GGTNACC 1 cut(s) 974
BstENI CCTNNNNNAGG 1 cut(s) 3141
BstH2I RGCGCY 1 cut(s) 2924
BstHHI GCGC 1 cut(s) 2923
BstMAI GTCTC 3 cut(s) 669, 2906, 2920
BstMCI CGRYCG 2 cut(s) 686, 3364
BstMWI GCNNNNNNNGC 1 cut(s) 1074
BstNI CCWGG 4 cut(s) 879, 1246, 1445, 1677
BstNSI RCATGY 5 cut(s) 629, 820, 857, 1132, 2850
BstPI GGTNACC 1 cut(s) 974
BstSCI CCNGG 7 cut(s) 877, 1087, 1244, 1443, 1461, 1675, 1680
BstSFI CTRYAG 1 cut(s) 2325
BstSLI GKGCMC 5 cut(s) 268, 1039, 1408, 1463, 1676
BstSNI TACGTA 1 cut(s) 2159
BstV1I GCAGC 6 cut(s) 151, 2085, 2702, 2737, 2750, 3544
BstV2I GAAGAC 2 cut(s) 262, 292
BstX2I RGATCY 4 cut(s) 889, 1255, 1510, 2079
BstXI CCANNNNNNTGG 2 cut(s) 1252, 3575
BstYI RGATCY 4 cut(s) 889, 1255, 1510, 2079
BstZ17I GTATAC 3 cut(s) 12, 2156, 2190
Bsu15I ATCGAT 1 cut(s) 3364
Bsu36I CCTNAGG 1 cut(s) 2344
BsuRI GGCC 7 cut(s) 937, 1037, 1303, 1406, 1461, 1674, 1680
BsuTUI ATCGAT 1 cut(s) 3364
BtgI CCRYGG 1 cut(s) 3574
BtgZI GCGATG 4 cut(s) 858, 1224, 1479, 3554
BtsI GCAGTG 1 cut(s) 2871
BtsIMutI CAGTG 6 cut(s) 268, 980, 1349, 1571, 1906, 2871
Cac8I GCNNGC 1 cut(s) 1415
CciI TCATGA 1 cut(s) 1998
CfoI GCGC 1 cut(s) 2923
ClaI ATCGAT 1 cut(s) 3364
CseI GACGC 2 cut(s) 1355, 3563
Csp6I GTAC 8 cut(s) 27, 108, 631, 923, 1745, 1801, 2209, 2256
CviQI GTAC 8 cut(s) 27, 108, 631, 923, 1745, 1801, 2209, 2256
DraI TTTAAA 3 cut(s) 408, 1203, 3624
DrdI GACNNNNNNGTC 1 cut(s) 2935
DseDI GACNNNNNNGTC 1 cut(s) 2935
Eam1104I CTCTTC 4 cut(s) 2859, 2886, 2895, 3023
EarI CTCTTC 4 cut(s) 2859, 2886, 2895, 3023
EciI GGCGGA 1 cut(s) 1155
Ecl136II GAGCTC 1 cut(s) 1569
Eco105I TACGTA 1 cut(s) 2159
Eco130I CCWWGG 5 cut(s) 964, 1147, 1499, 1657, 2143
Eco147I AGGCCT 2 cut(s) 937, 1303
Eco24I GRGCYC 5 cut(s) 1039, 1408, 1463, 1571, 1676
Eco47I GGWCC 5 cut(s) 343, 1085, 1465, 1618, 2471
Eco53kI GAGCTC 1 cut(s) 1569
Eco57I CTGAAG 2 cut(s) 1563, 1619
Eco72I CACGTG 2 cut(s) 995, 1922
Eco81I CCTNAGG 1 cut(s) 2344
Eco91I GGTNACC 1 cut(s) 974
EcoICRI GAGCTC 1 cut(s) 1569
EcoNI CCTNNNNNAGG 1 cut(s) 3141
EcoO109I RGGNCCY 5 cut(s) 1035, 1404, 1459, 1672, 2471
EcoO65I GGTNACC 1 cut(s) 974
EcoRII CCWGG 4 cut(s) 877, 1244, 1443, 1675
EcoT14I CCWWGG 5 cut(s) 964, 1147, 1499, 1657, 2143
EcoT22I ATGCAT 1 cut(s) 627
EcoT38I GRGCYC 5 cut(s) 1039, 1408, 1463, 1571, 1676
ErhI CCWWGG 5 cut(s) 964, 1147, 1499, 1657, 2143
Esp3I CGTCTC 1 cut(s) 2906
FalI AAGNNNNNCTT 4 cut(s) 2111, 2143, 2977, 3009
FaqI GGGAC 8 cut(s) 324, 356, 1324, 1949, 2322, 2484, 3087, 3361
FauI CCCGC 1 cut(s) 1085
FauNDI CATATG 1 cut(s) 919
FblI GTMKAC 5 cut(s) 11, 2037, 2123, 2155, 2189
Fnu4HI GCNGC 7 cut(s) 140, 2074, 2615, 2716, 2726, 2739, 3558
FriOI GRGCYC 5 cut(s) 1039, 1408, 1463, 1571, 1676
Fsp4HI GCNGC 7 cut(s) 140, 2074, 2615, 2716, 2726, 2739, 3558
GlaI GCGC 1 cut(s) 2922
GluI GCNGC 7 cut(s) 140, 2074, 2615, 2716, 2726, 2739, 3558
HaeII RGCGCY 1 cut(s) 2924
HaeIII GGCC 7 cut(s) 937, 1037, 1303, 1406, 1461, 1674, 1680
HapII CCGG 5 cut(s) 277, 1088, 1463, 1681, 2077
HgaI GACGC 2 cut(s) 1355, 3563
HhaI GCGC 1 cut(s) 2923
Hin6I GCGC 1 cut(s) 2921
HinP1I GCGC 1 cut(s) 2921
HincII GTYRAC 1 cut(s) 1859
HindII GTYRAC 1 cut(s) 1859
HindIII AAGCTT 2 cut(s) 320, 2135
HpaII CCGG 5 cut(s) 277, 1088, 1463, 1681, 2077
HphI GGTGA 2 cut(s) 986, 1355
Hpy188III TCNNGA 7 cut(s) 182, 277, 943, 1336, 1937, 1999, 3058
Hpy99I CGWCG 3 cut(s) 2938, 2941, 2965
HpyAV CCTTC 9 cut(s) 49, 1127, 1241, 2795, 2828, 2952, 2976, 2980, 3029
HpyCH4III ACNGT 8 cut(s) 1019, 1388, 1432, 1618, 1645, 1910, 2231, 2934
HpyCH4IV ACGT 5 cut(s) 994, 1177, 1921, 2158, 2258
HpyF10VI GCNNNNNNNGC 1 cut(s) 1074
HpySE526I ACGT 5 cut(s) 994, 1177, 1921, 2158, 2258
HspAI GCGC 1 cut(s) 2921
Kpn2I TCCGGA 1 cut(s) 276
LmnI GCTCC 2 cut(s) 64, 1566
Lsp1109I GCAGC 6 cut(s) 151, 2085, 2702, 2737, 2750, 3544
LweI GCATC 8 cut(s) 25, 479, 664, 1064, 1087, 2278, 2403, 2749
MaeII ACGT 5 cut(s) 994, 1177, 1921, 2158, 2258
MaeIII GTNAC 9 cut(s) 202, 331, 538, 974, 1133, 1343, 1474, 1687, 2159
MboII GAAGA 7 cut(s) 259, 267, 297, 2846, 2873, 2882, 3040
MfeI CAATTG 3 cut(s) 111, 3369, 3674
MflI RGATCY 4 cut(s) 889, 1255, 1510, 2079
MhlI GDGCHC 6 cut(s) 268, 1039, 1408, 1463, 1571, 1676
MlyI GAGTC 8 cut(s) 282, 818, 1070, 1445, 1658, 1897, 2796, 2829
MmeI TCCRAC 1 cut(s) 2033
Mph1103I ATGCAT 1 cut(s) 627
MroI TCCGGA 1 cut(s) 276
MroXI GAANNNNTTC 1 cut(s) 2376
MslI CAYNNNNRTG 2 cut(s) 2045, 3573
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 5 cut(s) 277, 1088, 1463, 1681, 2077
MspR9I CCNGG 7 cut(s) 879, 1089, 1246, 1445, 1463, 1677, 1682
MunI CAATTG 3 cut(s) 111, 3369, 3674
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 4 cut(s) 879, 1246, 1445, 1677
MwoI GCNNNNNNNGC 1 cut(s) 1074
NciI CCSGG 3 cut(s) 1089, 1463, 1682
NdeI CATATG 1 cut(s) 919
NmuCI GTSAC 6 cut(s) 331, 974, 1133, 1343, 1474, 1687
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 5 cut(s) 629, 820, 857, 1132, 2850
NspV TTCGAA 1 cut(s) 1959
PagI TCATGA 1 cut(s) 1998
PasI CCCWGGG 1 cut(s) 1245
PceI AGGCCT 2 cut(s) 937, 1303
PcsI WCGNNNNNNNCGW 2 cut(s) 1436, 1649
PctI GAATGC 1 cut(s) 959
PdmI GAANNNNTTC 1 cut(s) 2376
PfeI GAWTC 8 cut(s) 185, 946, 1143, 1772, 2461, 3454, 3506, 3637
PflFI GACNNNGTC 1 cut(s) 2932
PkrI GCNGC 7 cut(s) 141, 2075, 2616, 2717, 2727, 2740, 3559
Ple19I CGATCG 1 cut(s) 3364
PleI GAGTC 8 cut(s) 282, 817, 1069, 1444, 1657, 1897, 2796, 2829
PmaCI CACGTG 2 cut(s) 995, 1922
PmlI CACGTG 2 cut(s) 995, 1922
PpsI GAGTC 8 cut(s) 282, 817, 1069, 1444, 1657, 1897, 2796, 2829
Ppu21I YACGTR 3 cut(s) 995, 1922, 2159
PpuMI RGGWCCY 1 cut(s) 2471
PshBI ATTAAT 2 cut(s) 644, 3593
Psp124BI GAGCTC 1 cut(s) 1571
Psp1406I AACGTT 1 cut(s) 1177
Psp5II RGGWCCY 1 cut(s) 2471
Psp6I CCWGG 4 cut(s) 877, 1244, 1443, 1675
PspCI CACGTG 2 cut(s) 995, 1922
PspEI GGTNACC 1 cut(s) 974
PspGI CCWGG 4 cut(s) 877, 1244, 1443, 1675
PspOMI GGGCCC 4 cut(s) 1035, 1404, 1459, 1672
PspPPI RGGWCCY 1 cut(s) 2471
PsuI RGATCY 4 cut(s) 889, 1255, 1510, 2079
PsyI GACNNNGTC 1 cut(s) 2932
PvuI CGATCG 1 cut(s) 3364
RsaI GTAC 8 cut(s) 28, 109, 632, 924, 1746, 1802, 2210, 2257
RsaNI GTAC 8 cut(s) 27, 108, 631, 923, 1745, 1801, 2209, 2256
RseI CAYNNNNRTG 2 cut(s) 2045, 3573
SacI GAGCTC 1 cut(s) 1571
SatI GCNGC 7 cut(s) 140, 2074, 2615, 2716, 2726, 2739, 3558
SchI GAGTC 8 cut(s) 282, 818, 1070, 1445, 1658, 1897, 2796, 2829
ScrFI CCNGG 7 cut(s) 879, 1089, 1246, 1445, 1463, 1677, 1682
SduI GDGCHC 6 cut(s) 268, 1039, 1408, 1463, 1571, 1676
SfaNI GCATC 8 cut(s) 25, 479, 664, 1064, 1087, 2278, 2403, 2749
SfcI CTRYAG 1 cut(s) 2325
SfuI TTCGAA 1 cut(s) 1959
SinI GGWCC 5 cut(s) 343, 1085, 1465, 1618, 2471
SmiMI CAYNNNNRTG 2 cut(s) 2045, 3573
SmlI CTYRAG 6 cut(s) 317, 743, 1718, 2426, 2442, 2581
SmoI CTYRAG 6 cut(s) 317, 743, 1718, 2426, 2442, 2581
SnaBI TACGTA 1 cut(s) 2159
SseBI AGGCCT 2 cut(s) 937, 1303
SsiI CCGC 6 cut(s) 1044, 1077, 1092, 1140, 1792, 2615
SspI AATATT 2 cut(s) 710, 1421
SstI GAGCTC 1 cut(s) 1571
StuI AGGCCT 2 cut(s) 937, 1303
StyD4I CCNGG 7 cut(s) 877, 1087, 1244, 1443, 1461, 1675, 1680
StyI CCWWGG 5 cut(s) 964, 1147, 1499, 1657, 2143
TaaI ACNGT 8 cut(s) 1019, 1388, 1432, 1618, 1645, 1910, 2231, 2934
TaiI ACGT 5 cut(s) 997, 1180, 1924, 2161, 2261
TaqI TCGA 9 cut(s) 686, 1439, 1652, 1936, 1959, 1989, 3360, 3364, 3504
TaqII GACCGA 1 cut(s) 672
TatI WGTACW 5 cut(s) 107, 630, 922, 1744, 2208
TauI GCSGC 1 cut(s) 2617
TfiI GAWTC 8 cut(s) 185, 946, 1143, 1772, 2461, 3454, 3506, 3637
TscAI CASTG 6 cut(s) 268, 987, 1356, 1578, 1913, 2878
TseFI GTSAC 6 cut(s) 331, 974, 1133, 1343, 1474, 1687
TseI GCWGC 6 cut(s) 139, 2073, 2715, 2725, 2738, 3557
Tsp45I GTSAC 6 cut(s) 331, 974, 1133, 1343, 1474, 1687
TspDTI ATGAA 9 cut(s) 608, 763, 1178, 1966, 2369, 2706, 3284, 3363, 3644
TspGWI ACGGA 2 cut(s) 2771, 3091
TspRI CASTG 6 cut(s) 268, 987, 1356, 1578, 1913, 2878
Tth111I GACNNNGTC 1 cut(s) 2932
Vha464I CTTAAG 1 cut(s) 317
VneI GTGCAC 1 cut(s) 264
VpaK11BI GGWCC 5 cut(s) 343, 1085, 1465, 1618, 2471
VspI ATTAAT 2 cut(s) 644, 3593
XagI CCTNNNNNAGG 1 cut(s) 3141
XapI RAATTY 4 cut(s) 397, 563, 1205, 3002
XceI RCATGY 5 cut(s) 629, 820, 857, 1132, 2850
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
XmaJI CCTAGG 4 cut(s) 964, 1147, 1499, 1657
XmiI GTMKAC 5 cut(s) 11, 2037, 2123, 2155, 2189
XmnI GAANNNNTTC 1 cut(s) 2376
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.